Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 1399886 . A C CCDS12064.1:NM_000156.5:c.233gTg>gGg_NP_000147.1:p.78V>G Homo sapiens guanidinoacetate N-methyltransferase (GAMT), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3orh 1 Q14353 100.0 3e-180 X-RAY
 2010-09-15 VAL A:78 A:78 0.0 0.0 H -57.4 -42.0 0.0 0.0 0.0 SAH
HOH
 8.577
3.964
 CG2
CA
 O
O
VAL B:78 B:78 0.0 0.0 H -59.1 -42.0 NA NA NA
VAL C:78 C:78 0.0 0.0 H -59.9 -40.4 NA NA NA
VAL D:78 D:78 0.0 0.0 H -61.3 -41.2 NA NA NA
1xcj 1 P10868 87.18 6e-156 X-RAY
 2004-12-07 VAL A:77 A:77 0.0 0.0 H -62.2 -41.3 0.0 0.0 0.0 SAH
HOH
 8.504
6.994
 CG2
CG2
 O
O
1xcl 1 P10868 87.18 6e-156 X-RAY
 2004-12-07 VAL A:77 A:77 0.0 0.0 H -65.5 -38.0 0.0 0.0 0.0 SAH
HOH
 8.342
6.832
 CG2
CG2
 O
O
1p1b 1 P10868 90.4 1e-134 X-RAY
 2003-04-29 VAL A:41 A:77 0.0 0.0 H -58.4 -48.0 0.0 0.0 0.0 SAH
HOH
 8.674
7.058
 CG2
N
 O
O
VAL B:41 B:77 0.0 0.0 H -58.5 -47.1 0.0 0.0 0.0 SAH
HOH
 8.469
9.721
 CG2
N
 O
O
VAL C:41 C:77 0.0 0.0 H -59.2 -48.0 NA NA NA
VAL D:41 D:77 0.0 0.0 H -58.9 -47.5 NA NA NA
1p1c 1 P10868 90.4 1e-134 X-RAY
 2003-04-29 VAL A:41 A:77 0.0 0.0 H -60.7 -46.5 0.0 0.0 0.0 SAH
HOH
 8.474
6.366
 CG2
N
 O
O
VAL B:41 B:77 0.0 0.0 H -72.9 -48.0 0.0 0.0 0.0 SAH
HOH
 8.613
6.076
 CG2
C
 O
O
1khh 1 P10868 90.36 8e-134 X-RAY
 2001-12-12 VAL A:40 A:77 0.0 0.0 H -71.3 -43.6 0.0 0.0 0.0 SAH
HOH
 8.473
6.391
 CG2
O
 O
O
VAL B:40 B:77 0.0 0.0 H -74.3 -46.0 0.0 0.0 0.0 SAH
HOH
 8.446
6.536
 CG2
O
 O
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q14353-f1 1 Q14353 100.0 1e-180 VAL A:78 A:78 0.0 0.0 H -59.6 -38.5