Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 1399892 . G A CCDS12064.1:NM_000156.5:c.227tCa>tTa_NP_000147.1:p.76S>L Homo sapiens guanidinoacetate N-methyltransferase (GAMT), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3orh 1 Q14353 100.0 3e-180 X-RAY
 2010-09-15 SER A:76 A:76 48.0 0.417 H -68.7 -32.2 48.0 0.417 0.0 SAH
HOH
 6.936
2.586
 N
O
 O
O
SER B:76 B:76 48.0 0.417 H -67.6 -35.0 NA NA NA
SER C:76 C:76 49.0 0.426 H -68.4 -33.4 NA NA NA
SER D:76 D:76 48.0 0.417 H -68.3 -36.0 NA NA NA
1xcj 1 P10868 87.18 6e-156 X-RAY
 2004-12-07 SER A:75 A:75 42.0 0.365 H -65.6 -31.7 42.0 0.365 0.0 SAH
HOH
 6.909
4.246
 N
OG
 O
O
1xcl 1 P10868 87.18 6e-156 X-RAY
 2004-12-07 SER A:75 A:75 43.0 0.374 H -64.4 -28.7 43.0 0.374 0.0 SAH
HOH
 6.833
4.538
 N
OG
 O
O
1p1b 1 P10868 90.4 1e-134 X-RAY
 2003-04-29 SER A:39 A:75 50.0 0.435 H -80.3 -32.0 50.0 0.435 0.0 SAH
HOH
 6.966
4.119
 N
CB
 O
O
SER B:39 B:75 50.0 0.435 H -78.8 -35.3 50.0 0.435 0.0 SAH
HOH
 6.909
3.901
 N
OG
 O
O
SER C:39 C:75 51.0 0.443 H -79.2 -31.6 NA NA NA
SER D:39 D:75 50.0 0.435 H -79.3 -32.8 NA NA NA
1p1c 1 P10868 90.4 1e-134 X-RAY
 2003-04-29 SER A:39 A:75 44.0 0.383 H -65.3 -35.6 44.0 0.383 0.0 SAH
HOH
 6.959
2.937
 N
O
 O
O
SER B:39 B:75 53.0 0.461 H -78.7 -33.0 53.0 0.461 0.0 SAH
HOH
 7.103
3.406
 N
CB
 O
O
1khh 1 P10868 90.36 8e-134 X-RAY
 2001-12-12 SER A:38 A:75 46.0 0.4 H -71.4 -29.1 46.0 0.4 0.0 SAH
HOH
 7.005
3.124
 N
O
 O
O
SER B:38 B:75 45.0 0.391 H -77.3 -25.6 45.0 0.391 0.0 SAH
HOH
 6.901
3.384
 N
OG
 O
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q14353-f1 1 Q14353 100.0 1e-180 SER A:76 A:76 45.0 0.391 H -64.5 -38.4