Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr19 | 1399937 | . | C | A | CCDS12064.1:NM_000156.5:c.182gGg>gTg_NP_000147.1:p.61G>V | Homo sapiens guanidinoacetate N-methyltransferase (GAMT), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
3orh | 1 | Q14353 | 100.0 | 3e-180 |
X-RAY |
2010-09-15 | GLY | A:61 | A:61 | 12.0 | 0.16 | 65.2 | -142.1 | 12.0 | 0.16 | 0.0 |
HOH |
2.737 |
O |
O |
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GLY | B:61 | B:61 | 11.0 | 0.147 | 65.4 | -139.7 | NA | NA | NA | ||||||||||||||
GLY | C:61 | C:61 | 13.0 | 0.173 | 63.7 | -139.8 | NA | NA | NA | ||||||||||||||
GLY | D:61 | D:61 | 12.0 | 0.16 | 64.8 | -139.7 | NA | NA | NA | ||||||||||||||
1xcj | 1 | P10868 | 87.18 | 6e-156 |
X-RAY |
2004-12-07 | GLY | A:60 | A:60 | 8.0 | 0.107 | 67.1 | -128.6 | 8.0 | 0.107 | 0.0 |
HOH |
3.082 |
O |
O |
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1xcl | 1 | P10868 | 87.18 | 6e-156 |
X-RAY |
2004-12-07 | GLY | A:60 | A:60 | 13.0 | 0.173 | 69.2 | -153.1 | 13.0 | 0.173 | 0.0 |
HOH |
2.907 |
O |
O |
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1p1b | 1 | P10868 | 90.4 | 1e-134 |
X-RAY |
2003-04-29 | GLY | A:24 | A:60 | 10.0 | 0.133 | 60.5 | -151.8 | 10.0 | 0.133 | 0.0 |
HOH |
5.537 |
C |
O |
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GLY | B:24 | B:60 | 9.0 | 0.12 | 58.4 | -153.5 | 9.0 | 0.12 | 0.0 | ||||||||||||||
GLY | C:24 | C:60 | 10.0 | 0.133 | 57.1 | -153.3 | NA | NA | NA | ||||||||||||||
GLY | D:24 | D:60 | 10.0 | 0.133 | 58.4 | -153.4 | NA | NA | NA | ||||||||||||||
1p1c | 1 | P10868 | 90.4 | 1e-134 |
X-RAY |
2003-04-29 | GLY | A:24 | A:60 | 9.0 | 0.12 | 57.2 | -158.7 | 9.0 | 0.12 | 0.0 |
HOH |
3.607 |
C |
O |
|||
GLY | B:24 | B:60 | 11.0 | 0.147 | 67.4 | -164.6 | 11.0 | 0.147 | 0.0 |
HOH |
3.717 |
CA |
O |
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1khh | 1 | P10868 | 90.36 | 8e-134 |
X-RAY |
2001-12-12 | GLY | A:23 | A:60 | 9.0 | 0.12 | 66.5 | -152.3 | 9.0 | 0.12 | 0.0 |
HOH |
4.519 |
N |
O |
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GLY | B:23 | B:60 | 11.0 | 0.147 | 64.7 | -151.5 | 11.0 | 0.147 | 0.0 |
HOH |
3.623 |
CA |
O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q14353-f1 | 1 | Q14353 | 100.0 | 1e-180 | GLY | A:61 | A:61 | 9.0 | 0.12 | 63.2 | -145.6 |