Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 1401324 . T A CCDS12064.1:NM_000156.5:c.152cAc>cTc_NP_000147.1:p.51H>L Homo sapiens guanidinoacetate N-methyltransferase (GAMT), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3orh 1 Q14353 100.0 3e-180 X-RAY
 2010-09-15 HIS A:51 A:51 69.0 0.354 H -66.7 -38.6 69.0 0.354 0.0 SAH
HOH
 6.705
2.797
 N
NE2
 O
O
HIS B:51 B:51 68.0 0.349 H -66.2 -38.9 NA NA NA
HIS C:51 C:51 69.0 0.354 H -66.3 -38.8 NA NA NA
HIS D:51 D:51 66.0 0.338 H -67.4 -37.2 NA NA NA
1xcj 1 P10868 87.18 6e-156 X-RAY
 2004-12-07 HIS A:50 A:50 64.0 0.328 H -63.2 -32.8 64.0 0.328 0.0 SAH
NMG
HOH
 6.583
9.520
5.344
 N
N
O
 O
NH1
O
1xcl 1 P10868 87.18 6e-156 X-RAY
 2004-12-07 HIS A:50 A:50 62.0 0.318 H -64.6 -29.8 62.0 0.318 0.0 SAH
GAI
HOH
 6.595
9.674
3.267
 N
N
CE1
 O
N2
O
1p1b 1 P10868 90.4 1e-134 X-RAY
 2003-04-29 HIS A:14 A:50 63.0 0.323 H -73.7 -33.3 63.0 0.323 0.0 SAH
HOH
 6.752
2.496
 N
NE2
 O
O
HIS B:14 B:50 65.0 0.333 H -77.1 -28.1 65.0 0.333 0.0 SAH
HOH
 6.730
4.307
 N
ND1
 O
O
HIS C:14 C:50 63.0 0.323 H -74.4 -34.4 NA NA NA
HIS D:14 D:50 63.0 0.323 H -75.3 -34.3 NA NA NA
1p1c 1 P10868 90.4 1e-134 X-RAY
 2003-04-29 HIS A:14 A:50 69.0 0.354 H -74.5 -32.1 69.0 0.354 0.0 SAH
HOH
 6.862
2.689
 N
NE2
 O
O
HIS B:14 B:50 70.0 0.359 H -68.7 -29.1 70.0 0.359 0.0 SAH
HOH
 6.568
2.672
 N
NE2
 O
O
1khh 1 P10868 90.36 8e-134 X-RAY
 2001-12-12 HIS A:13 A:50 70.0 0.359 H -67.4 -33.2 70.0 0.359 0.0 SAH
HOH
 6.564
2.595
 N
NE2
 O
O
HIS B:13 B:50 71.0 0.364 H -68.3 -31.8 71.0 0.364 0.0 SAH
HOH
 6.567
2.903
 N
NE2
 O
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q14353-f1 1 Q14353 100.0 1e-180 HIS A:51 A:51 62.0 0.318 H -67.0 -35.3