Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 1401328 . T A CCDS12064.1:NM_000156.5:c.148Atg>Ttg_NP_000147.1:p.50M>L Homo sapiens guanidinoacetate N-methyltransferase (GAMT), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3orh 1 Q14353 100.0 3e-180 X-RAY
 2010-09-15 MET A:50 A:50 0.0 0.0 H -57.2 -35.1 0.0 0.0 0.0 SAH
HOH
 3.300
3.567
 SD
CE
 N
O
MET B:50 B:50 0.0 0.0 H -57.8 -35.0 NA NA NA
MET C:50 C:50 0.0 0.0 H -57.4 -35.1 NA NA NA
MET D:50 D:50 0.0 0.0 H -57.8 -34.4 NA NA NA
1xcj 1 P10868 87.18 6e-156 X-RAY
 2004-12-07 MET A:49 A:49 0.0 0.0 H -55.3 -43.0 0.0 0.0 0.0 SAH
NMG
HOH
 3.123
4.019
5.485
 SD
CE
SD
 O
NH1
O
1xcl 1 P10868 87.18 6e-156 X-RAY
 2004-12-07 MET A:49 A:49 0.0 0.0 H -57.2 -43.7 0.0 0.0 0.0 SAH
GAI
HOH
 3.220
3.977
5.562
 SD
CE
SD
 O
N2
O
1p1b 1 P10868 90.4 1e-134 X-RAY
 2003-04-29 MET A:13 A:49 8.0 0.043 H -60.5 -34.1 2.0 0.011 0.032 SAH
HOH
 2.955
6.131
 CE
SD
 N
O
MET B:13 B:49 11.0 0.059 H -58.9 -32.4 3.0 0.016 0.043 SAH
HOH
 2.947
7.615
 CE
N
 N
O
MET C:13 C:49 9.0 0.049 H -61.4 -34.5 NA NA NA
MET D:13 D:49 9.0 0.049 H -59.2 -33.6 NA NA NA
1p1c 1 P10868 90.4 1e-134 X-RAY
 2003-04-29 MET A:13 A:49 10.0 0.054 H -62.2 -30.7 4.0 0.022 0.032 B:P10868:0.005
 SAH
HOH
 3.451
6.393
 SD
CB
 O
O
MET B:13 B:49 8.0 0.043 H -52.3 -41.4 3.0 0.016 0.027 SAH
HOH
 3.135
6.278
 SD
CE
 O
O
1khh 1 P10868 90.36 8e-134 X-RAY
 2001-12-12 MET A:12 A:49 8.0 0.043 H -59.1 -38.1 2.0 0.011 0.032 B:P10868:0.005
 SAH
HOH
 3.221
4.073
 SD
CG
 O
O
MET B:12 B:49 7.0 0.038 H -61.3 -35.9 2.0 0.011 0.027 SAH
HOH
 3.187
6.122
 SD
C
 O
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q14353-f1 1 Q14353 100.0 1e-180 MET A:50 A:50 0.0 0.0 H -58.6 -36.0