Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr19 | 1401342 | . | C | A | CCDS12064.1:NM_000156.5:c.134tGg>tTg_NP_000147.1:p.45W>L | Homo sapiens guanidinoacetate N-methyltransferase (GAMT), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
3orh | 1 | Q14353 | 100.0 | 3e-180 |
X-RAY |
2010-09-15 | TRP | A:45 | A:45 | 46.0 | 0.18 | G | -59.4 | -25.1 | 46.0 | 0.18 | 0.0 |
SAH HOH |
9.547 2.630 |
C O |
O O |
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TRP | B:45 | B:45 | 39.0 | 0.153 | G | -58.1 | -25.4 | NA | NA | NA | |||||||||||||
TRP | C:45 | C:45 | 42.0 | 0.165 | G | -59.9 | -24.7 | NA | NA | NA | |||||||||||||
TRP | D:45 | D:45 | 44.0 | 0.173 | G | -59.6 | -25.7 | NA | NA | NA | |||||||||||||
1xcj | 1 | P10868 | 87.18 | 6e-156 |
X-RAY |
2004-12-07 | TRP | A:44 | A:44 | 41.0 | 0.161 | G | -56.4 | -20.2 | 41.0 | 0.161 | 0.0 |
SAH NMG HOH |
9.407 6.665 6.995 |
C CZ2 O |
O NH2 O |
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1xcl | 1 | P10868 | 87.18 | 6e-156 |
X-RAY |
2004-12-07 | TRP | A:44 | A:44 | 39.0 | 0.153 | G | -62.6 | -20.2 | 39.0 | 0.153 | 0.0 |
SAH GAI HOH |
9.444 6.785 6.819 |
N CZ2 O |
OXT N1 O |
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1p1b | 1 | P10868 | 90.4 | 1e-134 |
X-RAY |
2003-04-29 | TRP | A:8 | A:44 | 57.0 | 0.224 | T | -65.7 | -15.9 | 57.0 | 0.224 | 0.0 |
HOH |
2.548 |
O |
O |
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TRP | B:8 | B:44 | 57.0 | 0.224 | T | -62.8 | -16.8 | 57.0 | 0.224 | 0.0 |
HOH |
2.577 |
O |
O |
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TRP | C:8 | C:44 | 56.0 | 0.22 | T | -64.1 | -18.2 | NA | NA | NA | |||||||||||||
TRP | D:8 | D:44 | 57.0 | 0.224 | T | -64.4 | -16.4 | NA | NA | NA | |||||||||||||
1p1c | 1 | P10868 | 90.4 | 1e-134 |
X-RAY |
2003-04-29 | TRP | A:8 | A:44 | 56.0 | 0.22 | T | -70.5 | -16.9 | 56.0 | 0.22 | 0.0 |
HOH |
3.585 |
NE1 |
O |
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TRP | B:8 | B:44 | 57.0 | 0.224 | T | -66.1 | -25.3 | 57.0 | 0.224 | 0.0 |
HOH |
3.641 |
N |
O |
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1khh | 1 | P10868 | 90.36 | 8e-134 |
X-RAY |
2001-12-12 | TRP | A:7 | A:44 | 56.0 | 0.22 | T | -68.4 | -20.4 | 56.0 | 0.22 | 0.0 |
HOH |
4.667 |
NE1 |
O |
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TRP | B:7 | B:44 | 55.0 | 0.216 | T | -66.6 | -23.4 | 55.0 | 0.216 | 0.0 |
HOH |
2.537 |
O |
O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q14353-f1 | 1 | Q14353 | 100.0 | 1e-180 | TRP | A:45 | A:45 | 40.0 | 0.157 | G | -61.9 | -23.8 |