Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 1401343 . A C CCDS12064.1:NM_000156.5:c.133Tgg>Ggg_NP_000147.1:p.45W>G Homo sapiens guanidinoacetate N-methyltransferase (GAMT), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3orh 1 Q14353 100.0 3e-180 X-RAY
 2010-09-15 TRP A:45 A:45 46.0 0.18 G -59.4 -25.1 46.0 0.18 0.0 SAH
HOH
 9.547
2.630
 C
O
 O
O
TRP B:45 B:45 39.0 0.153 G -58.1 -25.4 NA NA NA
TRP C:45 C:45 42.0 0.165 G -59.9 -24.7 NA NA NA
TRP D:45 D:45 44.0 0.173 G -59.6 -25.7 NA NA NA
1xcj 1 P10868 87.18 6e-156 X-RAY
 2004-12-07 TRP A:44 A:44 41.0 0.161 G -56.4 -20.2 41.0 0.161 0.0 SAH
NMG
HOH
 9.407
6.665
6.995
 C
CZ2
O
 O
NH2
O
1xcl 1 P10868 87.18 6e-156 X-RAY
 2004-12-07 TRP A:44 A:44 39.0 0.153 G -62.6 -20.2 39.0 0.153 0.0 SAH
GAI
HOH
 9.444
6.785
6.819
 N
CZ2
O
 OXT
N1
O
1p1b 1 P10868 90.4 1e-134 X-RAY
 2003-04-29 TRP A:8 A:44 57.0 0.224 T -65.7 -15.9 57.0 0.224 0.0 HOH
 2.548
 O
 O
TRP B:8 B:44 57.0 0.224 T -62.8 -16.8 57.0 0.224 0.0 HOH
 2.577
 O
 O
TRP C:8 C:44 56.0 0.22 T -64.1 -18.2 NA NA NA
TRP D:8 D:44 57.0 0.224 T -64.4 -16.4 NA NA NA
1p1c 1 P10868 90.4 1e-134 X-RAY
 2003-04-29 TRP A:8 A:44 56.0 0.22 T -70.5 -16.9 56.0 0.22 0.0 HOH
 3.585
 NE1
 O
TRP B:8 B:44 57.0 0.224 T -66.1 -25.3 57.0 0.224 0.0 HOH
 3.641
 N
 O
1khh 1 P10868 90.36 8e-134 X-RAY
 2001-12-12 TRP A:7 A:44 56.0 0.22 T -68.4 -20.4 56.0 0.22 0.0 HOH
 4.667
 NE1
 O
TRP B:7 B:44 55.0 0.216 T -66.6 -23.4 55.0 0.216 0.0 HOH
 2.537
 O
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q14353-f1 1 Q14353 100.0 1e-180 TRP A:45 A:45 40.0 0.157 G -61.9 -23.8