Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 18309543 . T A CCDS12372.1:NM_002866.4:c.464gAc>gTc_NP_002857.1:p.155D>V Homo sapiens RAB3A, member RAS oncogene family (RAB3A), mRNA.
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1zbd 1 P63012 98.49 2e-148 X-RAY
 1999-04-02 ASP A:141 A:155 115.0 0.767 H -64.7 -38.4 115.0 0.767 0.0 HOH
 7.952
 N
 O
6y7g 1 Q96E17 84.09 2e-141 X-RAY
 2021-03-31 GLU A:163 A:163 149.0 0.784 H -64.1 -40.1 149.0 0.784 0.0 HOH
 8.757
 N
 O
GLU B:163 B:163 137.0 0.721 H -59.6 -42.2 NA NA NA
3rab 1 P63012 100.0 1e-125 X-RAY
 1999-04-16 ASP A:138 A:155 82.0 0.547 H -57.6 -49.9 82.0 0.547 0.0 HOH
 2.610
 O
 O
4rkf 1 P25228 82.54 1e-117 X-RAY
 2014-12-10 ASP A:156 A:154 105.0 0.7 H -67.4 -36.8 105.0 0.7 0.0 HOH
 2.743
 OD2
 O
ASP B:156 B:154 104.0 0.693 H -66.2 -37.7 NA NA NA
3dz8 1 P20337 86.13 1e-113 X-RAY
 2008-08-12 GLU A:156 A:155 95.0 NA H -67.3 -47.3 95.0 NA NA HOH
 9.118
 O
 O
2gf9 1 O95716 88.82 2e-113 X-RAY
 2006-05-02 ASP A:155 A:155 129.0 0.86 H -62.5 -44.6 129.0 0.86 0.0 HOH
 2.630
 OD2
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p20336-f1 1 P20336 100.0 4e-168 ASP A:155 A:155 111.0 0.74 H -58.9 -44.1
af-q96e17-f1 1 Q96E17 84.09 9e-142 GLU A:163 A:163 145.0 0.763 H -57.5 -47.5