Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 19260079 . A C CCDS12394.1:NM_005919.3:c.214Tac>Gac_NP_005910.1:p.72Y>D Homo sapiens BORCS8-MEF2B readthrough (BORCS8-MEF2B), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1n6j 3 Q02080 100.0 2e-63 X-RAY
 2003-11-11 TYR C:71 A:72 142.0 0.617 -89.4 138.9 42.0 0.183 0.434 D:Q02080:0.357
E:Q9Y6J0:0.091
 HOH
 3.234
 CD2
 O
TYR D:71 B:72 139.0 0.604 -88.5 137.7 51.0 0.222 0.382 C:Q02080:0.322
E:Q9Y6J0:0.061
 HOH
 2.614
 O
 O
1tqe 3 Q02080 100.0 2e-63 X-RAY
 2004-12-21 TYR E:72 P:72 143.0 0.622 -82.7 76.6 85.0 0.37 0.252 F:Q02080:0.252
TYR F:72 Q:72 107.0 0.465 -114.0 97.9 22.0 0.096 0.369 G:Q99N13:0.052
E:Q02080:0.317
TYR H:72 R:72 173.0 0.752 S -59.1 89.0 NA NA NA
TYR I:72 S:72 127.0 0.552 -145.2 88.1 NA NA NA
6c9l 1 Q02080 100.0 2e-63 X-RAY
 2018-02-07 TYR A:72 A:72 133.0 0.578 -61.8 121.5 38.0 0.165 0.413 B:Q02080:0.413
 HOH
 2.465
 O
 O
TYR B:72 B:72 151.0 0.657 S -82.1 142.4 68.0 0.296 0.361 A:Q02080:0.361
 HOH
 3.863
 CE2
 O
TYR C:72 C:72 151.0 0.657 S -83.1 141.6 NA NA NA
TYR D:72 D:72 136.0 0.591 -60.0 122.7 NA NA NA
TYR E:72 E:72 223.0 0.97 -125.9 360.0 NA NA NA
TYR F:72 F:72 181.0 0.787 H -109.1 -17.5 NA NA NA
6wc5 1 Q02080 100.0 5e-61 X-RAY
 2020-07-22 TYR A:71 A:72 109.0 0.474 -160.1 86.6 43.0 0.187 0.287 B:Q02080:0.287
TYR B:71 B:72 133.0 0.578 -77.3 -53.9 39.0 0.17 0.408 A:Q02080:0.409
TYR C:71 C:72 124.0 0.539 -81.5 107.4 NA NA NA
TYR D:71 D:72 127.0 0.552 -51.5 102.7 NA NA NA
6byy 1 Q02078,Q02080 93.41 5e-59 X-RAY
 2018-01-31 TYR A:72 A:72 115.0 0.5 -87.3 117.7 36.0 0.157 0.343 B:Q02078+Q02080:0.343
 1PG
1PG
HOH
 3.690
7.856
2.601
 CD2
OH
O
 C10
O6
O
TYR B:72 B:72 111.0 0.483 -72.8 136.6 42.0 0.183 0.3 A:Q02078+Q02080:0.3
 HOH
 2.519
 OH
 O
TYR C:72 C:72 118.0 0.513 -70.5 121.1 NA NA NA
TYR D:72 D:72 130.0 0.565 -80.0 126.0 NA NA NA
6wc2 1 Q02078,Q02080 93.41 5e-59 X-RAY
 2020-07-22 TYR A:72 A:72 138.0 0.6 -72.9 121.1 62.0 0.27 0.33 B:Q02078+Q02080:0.33
 HOH
 3.251
 N
 O
TYR B:72 B:72 125.0 0.543 -74.8 122.8 48.0 0.209 0.334 A:Q02078+Q02080:0.335
 HOH
 2.686
 OH
 O
TYR C:72 C:72 141.0 0.613 -74.7 118.8 NA NA NA
TYR D:72 D:72 131.0 0.57 S -81.5 153.1 NA NA NA
TYR I:72 I:72 149.0 0.648 -91.2 127.8 NA NA NA
TYR J:72 J:72 142.0 0.617 -94.7 119.4 NA NA NA
6bz1 1 Q02078,Q02080 92.31 1e-57 X-RAY
 2018-02-07 TYR A:72 C:72 129.0 0.561 -55.0 117.6 49.0 0.213 0.348 B:Q02078+Q02080:0.348
TYR B:72 D:72 118.0 0.513 -56.1 118.0 39.0 0.17 0.343 A:Q02078+Q02080:0.343
TYR E:72 A:72 111.0 0.483 -57.5 117.7 NA NA NA
TYR F:72 B:72 116.0 0.504 -56.1 117.5 NA NA NA
5f28 1 Q8CFN5 85.71 1e-54 X-RAY
 2016-07-13 TYR A:72 A:72 109.0 0.474 -87.2 108.8 42.0 0.183 0.291 B:Q8CFN5:0.291
TYR B:72 B:72 116.0 0.504 -75.8 92.3 30.0 0.13 0.374 A:Q8CFN5:0.313
F:P34152:0.061
 HOH
 5.138
 OH
 O
TYR C:72 C:72 115.0 0.5 -142.4 119.8 NA NA NA
TYR D:72 D:72 120.0 0.522 -76.1 113.5 NA NA NA
3kov 1 Q02078 85.56 5e-54 X-RAY
 2010-02-16 TYR A:71 A:72 128.0 0.557 -59.4 140.4 46.0 0.2 0.357 B:Q02078:0.357
TYR B:71 B:72 126.0 0.548 -59.1 137.5 47.0 0.204 0.344 A:Q02078:0.343
TYR C:71 I:72 127.0 0.552 -57.9 139.4 NA NA NA
TYR D:71 J:72 123.0 0.535 -57.0 140.2 NA NA NA
3p57 1 Q02078 85.56 5e-54 X-RAY
 2011-08-10 TYR A:71 A:72 116.0 0.504 -72.3 135.8 31.0 0.135 0.369 M:Q09472:0.048
B:Q02078:0.322
 HOH
 2.532
 OH
 O
TYR B:71 B:72 120.0 0.522 -75.1 142.4 48.0 0.209 0.313 A:Q02078:0.313
 HOH
 2.495
 OH
 O
TYR C:71 C:72 114.0 0.496 -70.5 119.0 40.0 0.174 0.322 D:Q02078:0.322
 HOH
 2.668
 OH
 O
TYR D:71 D:72 120.0 0.522 -55.2 128.6 49.0 0.213 0.309 C:Q02078:0.309
 HOH
 3.713
 N
 O
TYR E:71 I:72 118.0 0.513 -79.3 118.3 46.0 0.2 0.313 F:Q02078:0.313
 HOH
 3.434
 N
 O
TYR F:71 J:72 128.0 0.557 -67.1 127.6 56.0 0.243 0.314 E:Q02078:0.313
 HOH
 3.716
 N
 O
1egw 3 Q02078 90.91 1e-47 X-RAY
 2000-03-20 TYR E:71 A:72 248.0 1.0 -57.9 360.0 149.0 0.648 0.352 F:Q02078:0.43
 HOH
 3.135
 O
 O
TYR F:71 B:72 210.0 0.913 H -51.0 -40.1 121.0 0.526 0.387 E:Q02078:0.387
 HOH
 2.902
 OH
 O
TYR G:71 C:72 205.0 0.891 H -58.0 -43.6 NA NA NA
TYR H:71 D:72 248.0 1.0 -58.0 360.0 NA NA NA
3mu6 1 Q02078 90.14 5e-42 X-RAY
 2011-11-02 TYR A:71 A:72 237.0 1.0 -64.3 360.0 152.0 0.661 0.339 B:Q02078:0.37
 BXL
 9.886
 N
 C4
TYR B:71 B:72 234.0 1.0 -63.1 360.0 149.0 0.648 0.352 A:Q02078:0.37
 BXL
 8.734
 N
 C1
TYR E:71 C:72 238.0 1.0 -63.4 360.0 NA NA NA
TYR F:71 D:72 240.0 1.0 -63.6 360.0 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q02080-f1 1 Q02080 100.0 0.0 TYR A:72 A:72 152.0 0.661 -94.9 124.4