Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 19260114 . G A CCDS12394.1:NM_005919.3:c.179aCg>aTg_NP_005910.1:p.60T>M Homo sapiens BORCS8-MEF2B readthrough (BORCS8-MEF2B), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1n6j 3 Q02080 100.0 2e-63 X-RAY
 2003-11-11 THR C:59 A:60 78.0 0.557 S -101.2 -79.8 64.0 0.457 0.1 D:Q02080:0.1
 HOH
 3.292
 CG2
 O
THR D:59 B:60 81.0 0.579 S -100.6 -83.4 66.0 0.471 0.108 C:Q02080:0.107
 HOH
 3.476
 CG2
 O
1tqe 3 Q02080 100.0 2e-63 X-RAY
 2004-12-21 THR E:60 P:60 76.0 0.543 S -132.7 -55.0 58.0 0.414 0.129 F:Q02080:0.129
THR F:60 Q:60 95.0 0.679 S -132.1 -59.9 63.0 0.45 0.229 E:Q02080:0.229
THR H:60 R:60 98.0 0.7 S -133.3 -56.1 NA NA NA
THR I:60 S:60 101.0 0.721 S -131.8 -62.4 NA NA NA
6c9l 1 Q02080 100.0 2e-63 X-RAY
 2018-02-07 THR A:60 A:60 72.0 0.514 S -97.1 -83.9 59.0 0.421 0.093 B:Q02080:0.093
 HOH
 3.271
 O
 O
THR B:60 B:60 71.0 0.507 S -98.8 -88.1 58.0 0.414 0.093 A:Q02080:0.093
 HOH
 4.900
 O
 O
THR C:60 C:60 75.0 0.536 S -99.0 -87.5 NA NA NA
THR D:60 D:60 72.0 0.514 S -99.1 -85.6 NA NA NA
THR E:60 E:60 72.0 0.514 S -96.7 -86.3 NA NA NA
THR F:60 F:60 56.0 0.4 S -97.3 -86.0 NA NA NA
6wc5 1 Q02080 100.0 5e-61 X-RAY
 2020-07-22 THR A:59 A:60 85.0 0.607 S -111.0 -60.5 61.0 0.436 0.171 B:Q02080:0.171
THR B:59 B:60 93.0 0.664 S -109.9 -59.9 78.0 0.557 0.107 A:Q02080:0.107
THR C:59 C:60 111.0 0.793 S -112.4 -62.4 NA NA NA
THR D:59 D:60 96.0 0.686 S -111.1 -60.1 NA NA NA
6byy 1 Q02078,Q02080 93.41 5e-59 X-RAY
 2018-01-31 THR A:60 A:60 111.0 0.793 S -137.5 -48.5 93.0 0.664 0.129 B:Q02078+Q02080:0.129
 1PG
HOH
 6.776
2.763
 CB
N
 C1
O
THR B:60 B:60 75.0 0.536 S -136.3 -161.1 71.0 0.507 0.029 A:Q02078+Q02080:0.029
 HOH
 1.995
 OG1
 O
THR C:60 C:60 110.0 0.786 S -128.4 -66.1 NA NA NA
THR D:60 D:60 57.0 0.407 S -156.9 -178.5 NA NA NA
6wc2 1 Q02078,Q02080 93.41 5e-59 X-RAY
 2020-07-22 THR A:60 A:60 89.0 0.636 S -133.6 -46.4 72.0 0.514 0.122 B:Q02078+Q02080:0.121
 HOH
 2.532
 O
 O
THR B:60 B:60 44.0 0.314 S -151.1 -178.8 44.0 0.314 0.0 HOH
 3.814
 N
 O
THR C:60 C:60 135.0 0.964 S -129.7 -56.7 NA NA NA
THR D:60 D:60 87.0 0.621 S -130.1 -70.4 NA NA NA
THR I:60 I:60 111.0 0.793 S -123.7 -53.4 NA NA NA
THR J:60 J:60 70.0 0.5 S -127.2 -69.5 NA NA NA
6bz1 1 Q02078,Q02080 92.31 1e-57 X-RAY
 2018-02-07 THR A:60 C:60 75.0 0.536 S -77.6 -71.4 66.0 0.471 0.065 B:Q02078+Q02080:0.064
THR B:60 D:60 77.0 0.55 S -78.2 -72.4 70.0 0.5 0.05 A:Q02078+Q02080:0.05
THR E:60 A:60 76.0 0.543 S -78.8 -72.1 NA NA NA
THR F:60 B:60 74.0 0.529 S -77.3 -72.2 NA NA NA
5f28 1 Q8CFN5 85.71 1e-54 X-RAY
 2016-07-13 THR A:60 A:60 82.0 0.586 S -109.5 -69.7 68.0 0.486 0.1 B:Q8CFN5:0.1
 HOH
 3.851
 CG2
 O
THR B:60 B:60 80.0 0.571 S -120.5 -103.0 66.0 0.471 0.1 A:Q8CFN5:0.1
 HOH
 5.554
 O
 O
THR C:60 C:60 113.0 0.807 S -137.9 -67.5 NA NA NA
THR D:60 D:60 87.0 0.621 S -129.7 -99.8 NA NA NA
3kov 1 Q02078 85.56 5e-54 X-RAY
 2010-02-16 THR A:59 A:60 85.0 0.607 S -136.7 -107.7 71.0 0.507 0.1 B:Q02078:0.1
THR B:59 B:60 83.0 0.593 S -135.9 -101.2 71.0 0.507 0.086 A:Q02078:0.086
THR C:59 I:60 77.0 0.55 S -140.4 -130.5 NA NA NA
THR D:59 J:60 87.0 0.621 S -138.7 -105.3 NA NA NA
3p57 1 Q02078 85.56 5e-54 X-RAY
 2011-08-10 THR A:59 A:60 63.0 0.45 S -148.2 -177.2 59.0 0.421 0.029 B:Q02078:0.029
 HOH
 3.525
 O
 O
THR B:59 B:60 75.0 0.536 S -119.4 -178.2 67.0 0.479 0.057 A:Q02078:0.057
 HOH
 3.822
 O
 O
THR C:59 C:60 70.0 0.5 S -162.9 -170.9 66.0 0.471 0.029 D:Q02078:0.029
 HOH
 4.149
 CB
 O
THR D:59 D:60 63.0 0.45 S -111.5 -168.6 55.0 0.393 0.057 C:Q02078:0.057
 HOH
 5.270
 O
 O
THR E:59 I:60 65.0 0.464 S -143.7 -159.5 58.0 0.414 0.05 F:Q02078:0.05
 HOH
 7.725
 OG1
 O
THR F:59 J:60 113.0 0.807 S -130.8 -61.0 80.0 0.571 0.236 M:Q09472:0.086
E:Q02078:0.171
 HOH
 2.485
 OG1
 O
1egw 3 Q02078 90.91 1e-47 X-RAY
 2000-03-20 THR E:59 A:60 66.0 0.471 S -144.3 -173.1 66.0 0.471 0.0 HOH
 2.936
 CG2
 O
THR F:59 B:60 67.0 0.479 S -145.7 -160.0 67.0 0.479 0.0 HOH
 2.774
 CG2
 O
THR G:59 C:60 70.0 0.5 S -142.9 -161.1 NA NA NA
THR H:59 D:60 62.0 0.443 S -143.3 -167.2 NA NA NA
3mu6 1 Q02078 90.14 5e-42 X-RAY
 2011-11-02 THR A:59 A:60 60.0 0.429 S -151.2 -170.8 60.0 0.429 0.0 BXL
 5.339
 O
 C17
THR B:59 B:60 62.0 0.443 S -150.8 -170.8 62.0 0.443 0.0
THR E:59 C:60 59.0 0.421 S -150.3 -169.0 NA NA NA
THR F:59 D:60 61.0 0.436 S -150.4 -170.1 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q02080-f1 1 Q02080 100.0 0.0 THR A:60 A:60 72.0 0.514 S -121.0 -108.0