Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 19260195 . T A CCDS12394.1:NM_005919.3:c.98tAt>tTt_NP_005910.1:p.33Y>F Homo sapiens BORCS8-MEF2B readthrough (BORCS8-MEF2B), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1n6j 3 Q02080 100.0 2e-63 X-RAY
 2003-11-11 TYR C:32 A:33 131.0 0.57 H -59.0 -53.1 17.0 0.074 0.496 D:Q02080:0.496
 DT
DA
DA
HOH
 9.688
9.975
8.211
3.134
 N
CD2
CD2
OH
 OP1
O3'
OP1
O
TYR D:32 B:33 131.0 0.57 H -59.6 -54.0 19.0 0.083 0.487 C:Q02080:0.487
 DT
DA
DT
HOH
 9.923
8.167
9.997
2.773
 CD2
CD2
N
OH
 O3'
OP1
OP1
O
1tqe 3 Q02080 100.0 2e-63 X-RAY
 2004-12-21 TYR E:33 P:33 123.0 0.535 H -41.5 -47.5 18.0 0.078 0.457 F:Q02080:0.457
 DT
DA
DT
 9.784
8.105
9.779
 CE2
CD2
N
 O3'
OP1
OP1
TYR F:33 Q:33 128.0 0.557 H -42.8 -46.7 11.0 0.048 0.509 E:Q02080:0.509
 DA
DA
 9.944
8.025
 CE2
CD2
 O3'
OP1
TYR H:33 R:33 125.0 0.543 H -42.0 -47.5 NA NA NA
TYR I:33 S:33 126.0 0.548 H -41.1 -47.0 NA NA NA
6c9l 1 Q02080 100.0 2e-63 X-RAY
 2018-02-07 TYR A:33 A:33 134.0 0.583 H -52.2 -51.3 20.0 0.087 0.496 B:Q02080:0.496
 HOH
 2.842
 OH
 O
TYR B:33 B:33 138.0 0.6 H -52.6 -50.7 27.0 0.117 0.483 A:Q02080:0.483
 HOH
 6.217
 C
 O
TYR C:33 C:33 139.0 0.604 H -52.4 -50.8 NA NA NA
TYR D:33 D:33 134.0 0.583 H -52.2 -51.1 NA NA NA
TYR E:33 E:33 127.0 0.552 H -50.8 -51.4 NA NA NA
TYR F:33 F:33 127.0 0.552 H -50.7 -51.4 NA NA NA
6wc5 1 Q02080 100.0 5e-61 X-RAY
 2020-07-22 TYR A:32 A:33 134.0 0.583 H -61.1 -50.6 19.0 0.083 0.5 B:Q02080:0.5
 DA
DA
HOH
 8.818
9.869
7.675
 CD2
N
N
 OP1
OP1
O
TYR B:32 B:33 136.0 0.591 H -60.7 -50.7 40.0 0.174 0.417 A:Q02080:0.417
 DT
DT
 9.900
8.531
 N
CD2
 OP1
OP1
TYR C:32 C:33 137.0 0.596 H -61.2 -50.0 NA NA NA
TYR D:32 D:33 135.0 0.587 H -61.4 -50.5 NA NA NA
6byy 1 Q02078,Q02080 93.41 5e-59 X-RAY
 2018-01-31 TYR A:33 A:33 130.0 0.565 H -57.3 -43.4 15.0 0.065 0.5 B:Q02078+Q02080:0.5
 DT
DA
DA
HOH
 9.845
9.717
8.027
2.756
 N
CD2
CD2
OH
 OP1
O3'
OP1
O
TYR B:33 B:33 130.0 0.565 H -55.8 -45.1 14.0 0.061 0.504 A:Q02078+Q02080:0.504
 DT
DA
HOH
 9.861
8.058
1.996
 CD1
CD1
OH
 O3'
OP1
O
TYR C:33 C:33 135.0 0.587 H -53.1 -55.6 NA NA NA
TYR D:33 D:33 127.0 0.552 H -57.4 -53.2 NA NA NA
6wc2 1 Q02078,Q02080 93.41 5e-59 X-RAY
 2020-07-22 TYR A:33 A:33 129.0 0.561 H -58.0 -45.0 13.0 0.057 0.504 B:Q02078+Q02080:0.504
 DA
DA
DA
HOH
 9.856
7.978
9.825
2.612
 CD2
CD2
N
OH
 O3'
OP1
OP1
O
TYR B:33 B:33 127.0 0.552 H -56.3 -47.9 18.0 0.078 0.474 A:Q02078+Q02080:0.474
 DT
HOH
 8.429
6.438
 CD2
N
 OP1
O
TYR C:33 C:33 128.0 0.557 H -56.4 -47.8 NA NA NA
TYR D:33 D:33 128.0 0.557 H -56.9 -47.8 NA NA NA
TYR I:33 I:33 130.0 0.565 H -58.7 -46.5 NA NA NA
TYR J:33 J:33 131.0 0.57 H -58.8 -47.5 NA NA NA
6bz1 1 Q02078,Q02080 92.31 1e-57 X-RAY
 2018-02-07 TYR A:33 C:33 128.0 0.557 H -48.0 -49.0 93.0 0.404 0.153 B:Q02078+Q02080:0.152
 DT
DA
DT
 9.981
8.201
9.925
 CD2
CD2
N
 O3'
OP1
OP1
TYR B:33 D:33 126.0 0.548 H -48.4 -48.6 89.0 0.387 0.161 A:Q02078+Q02080:0.161
 DT
DA
 9.976
8.026
 N
CD2
 OP1
OP1
TYR E:33 A:33 124.0 0.539 H -48.6 -48.7 NA NA NA
TYR F:33 B:33 126.0 0.548 H -47.9 -48.9 NA NA NA
5f28 1 Q8CFN5 85.71 1e-54 X-RAY
 2016-07-13 TYR A:33 A:33 130.0 0.565 H -63.7 -42.1 47.0 0.204 0.361 B:Q8CFN5:0.361
 HOH
 7.278
 O
 O
TYR B:33 B:33 133.0 0.578 H -61.3 -44.4 52.0 0.226 0.352 A:Q8CFN5:0.352
 HOH
 2.723
 OH
 O
TYR C:33 C:33 123.0 0.535 H -61.8 -41.8 NA NA NA
TYR D:33 D:33 127.0 0.552 H -63.1 -49.2 NA NA NA
3kov 1 Q02078 85.56 5e-54 X-RAY
 2010-02-16 TYR A:32 A:33 130.0 0.565 H -58.3 -58.3 25.0 0.109 0.456 B:Q02078:0.457
 DA
DT
DA
DA
 9.391
9.211
9.476
7.372
 CD2
N
CD2
CD2
 OP1
OP1
O3'
OP1
TYR B:32 B:33 128.0 0.557 H -49.8 -58.7 24.0 0.104 0.453 A:Q02078:0.452
 DA
DT
DA
DA
 9.106
9.577
9.636
7.227
 CD2
C
CD2
CD2
 OP1
OP1
O3'
OP1
TYR C:32 I:33 127.0 0.552 H -53.6 -56.4 NA NA NA
TYR D:32 J:33 125.0 0.543 H -52.0 -55.4 NA NA NA
3p57 1 Q02078 85.56 5e-54 X-RAY
 2011-08-10 TYR A:32 A:33 132.0 0.574 H -50.0 -52.2 27.0 0.117 0.457 B:Q02078:0.457
 DT
DA
DT
HOH
 9.989
8.201
9.964
2.614
 CD2
CD2
N
OH
 O3'
OP1
OP1
O
TYR B:32 B:33 132.0 0.574 H -49.8 -57.2 26.0 0.113 0.461 A:Q02078:0.461
 DA
HOH
 8.258
6.175
 CD2
C
 OP1
O
TYR C:32 C:33 133.0 0.578 H -56.0 -49.8 30.0 0.13 0.448 D:Q02078:0.448
 DT
DA
HOH
 9.999
8.167
4.499
 N
CD2
CE2
 OP1
OP1
O
TYR D:32 D:33 125.0 0.543 H -51.3 -52.2 22.0 0.096 0.447 C:Q02078:0.448
 DT
DA
DT
HOH
 9.845
8.172
9.959
6.183
 CD2
CD2
N
C
 O3'
OP1
OP1
O
TYR E:32 I:33 131.0 0.57 H -57.7 -52.2 28.0 0.122 0.448 F:Q02078:0.448
 DT
DA
HOH
 9.928
8.452
5.955
 N
CD2
C
 OP1
OP1
O
TYR F:32 J:33 133.0 0.578 H -59.2 -47.5 25.0 0.109 0.469 E:Q02078:0.47
 DT
DA
DT
HOH
 9.945
8.058
9.950
6.219
 CD2
CD2
N
C
 O3'
OP1
OP1
O
1egw 3 Q02078 90.91 1e-47 X-RAY
 2000-03-20 TYR E:32 A:33 131.0 0.57 H -58.1 -49.3 116.0 0.504 0.066 F:Q02078:0.065
 DT
DT
DA
HOH
 8.864
9.824
9.022
3.606
 CD2
N
CD2
CD1
 OP1
OP1
OP1
O
TYR F:32 B:33 133.0 0.578 H -57.1 -47.3 117.0 0.509 0.069 E:Q02078:0.07
 DT
DA
DT
HOH
 9.042
8.799
9.824
2.409
 CD2
CD2
N
OH
 OP1
OP1
OP1
O
TYR G:32 C:33 130.0 0.565 H -57.6 -46.0 NA NA NA
TYR H:32 D:33 134.0 0.583 H -58.9 -49.3 NA NA NA
3mu6 1 Q02078 90.14 5e-42 X-RAY
 2011-11-02 TYR A:32 A:33 131.0 0.57 H -53.3 -48.2 116.0 0.504 0.066 B:Q02078:0.065
 DT
 9.015
 CD2
 OP1
TYR B:32 B:33 130.0 0.565 H -54.6 -49.1 116.0 0.504 0.061 A:Q02078:0.061
 DA
 8.915
 CD2
 OP1
TYR E:32 C:33 133.0 0.578 H -55.3 -48.7 NA NA NA
TYR F:32 D:33 129.0 0.561 H -55.6 -47.9 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q02080-f1 1 Q02080 100.0 0.0 TYR A:33 A:33 136.0 0.591 H -56.6 -49.2