Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 19261516 . C A CCDS12394.1:NM_005919.3:c.29cGc>cTc_NP_005910.1:p.10R>L Homo sapiens BORCS8-MEF2B readthrough (BORCS8-MEF2B), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1n6j 3 Q02080 100.0 2e-63 X-RAY
 2003-11-11 ARG C:9 A:10 170.0 0.756 -44.6 129.8 115.0 0.511 0.245 D:Q02080:0.244
 HOH
 2.865
 N
 O
ARG D:9 B:10 171.0 0.76 -42.6 130.2 116.0 0.516 0.244 C:Q02080:0.244
 HOH
 2.573
 NE
 O
1tqe 3 Q02080 100.0 2e-63 X-RAY
 2004-12-21 ARG E:10 P:10 150.0 0.667 -27.6 110.2 102.0 0.453 0.214 F:Q02080:0.213
ARG F:10 Q:10 151.0 0.671 -25.5 109.5 104.0 0.462 0.209 E:Q02080:0.209
ARG H:10 R:10 152.0 0.676 -27.3 111.0 NA NA NA
ARG I:10 S:10 152.0 0.676 -25.2 109.5 NA NA NA
6c9l 1 Q02080 100.0 2e-63 X-RAY
 2018-02-07 ARG A:10 A:10 198.0 0.88 -81.6 133.7 128.0 0.569 0.311 B:Q02080:0.311
 HOH
 2.726
 NE
 O
ARG B:10 B:10 189.0 0.84 G -87.0 -18.1 189.0 0.84 0.0 HOH
 2.748
 O
 O
ARG C:10 C:10 190.0 0.844 G -89.9 -16.7 NA NA NA
ARG D:10 D:10 193.0 0.858 -81.8 134.5 NA NA NA
ARG E:10 E:10 177.0 0.787 -82.9 133.7 NA NA NA
ARG F:10 F:10 189.0 0.84 -82.8 134.0 NA NA NA
6wc5 1 Q02080 100.0 5e-61 X-RAY
 2020-07-22 ARG A:9 A:10 195.0 0.867 -41.0 120.3 130.0 0.578 0.289 B:Q02080:0.289
ARG B:9 B:10 173.0 0.769 -44.2 120.8 115.0 0.511 0.258 A:Q02080:0.258
ARG C:9 C:10 201.0 0.893 -41.1 122.8 NA NA NA
ARG D:9 D:10 184.0 0.818 -42.9 121.2 NA NA NA
6byy 1 Q02078,Q02080 93.41 5e-59 X-RAY
 2018-01-31 ARG A:10 A:10 119.0 0.529 -58.2 126.1 63.0 0.28 0.249 B:Q02078+Q02080:0.249
 HOH
 2.432
 NH2
 O
ARG B:10 B:10 143.0 0.636 -59.7 126.3 92.0 0.409 0.227 A:Q02078+Q02080:0.227
 HOH
 2.819
 O
 O
ARG C:10 C:10 187.0 0.831 -67.7 106.9 NA NA NA
ARG D:10 D:10 171.0 0.76 -62.4 137.0 NA NA NA
6wc2 1 Q02078,Q02080 93.41 5e-59 X-RAY
 2020-07-22 ARG A:10 A:10 138.0 0.613 -59.4 131.5 84.0 0.373 0.24 B:Q02078+Q02080:0.24
 HOH
 9.296
 C
 O
ARG B:10 B:10 165.0 0.733 -55.3 130.5 80.0 0.356 0.377 A:Q02078+Q02080:0.378
 HOH
 3.025
 N
 O
ARG C:10 C:10 165.0 0.733 -57.8 129.7 NA NA NA
ARG D:10 D:10 137.0 0.609 -53.7 128.4 NA NA NA
ARG I:10 I:10 189.0 0.84 -60.1 130.1 NA NA NA
ARG J:10 J:10 185.0 0.822 -60.1 130.9 NA NA NA
6bz1 1 Q02078,Q02080 92.31 1e-57 X-RAY
 2018-02-07 ARG A:10 C:10 139.0 0.618 -58.1 124.9 80.0 0.356 0.262 B:Q02078+Q02080:0.262
ARG B:10 D:10 139.0 0.618 -56.7 125.6 83.0 0.369 0.249 A:Q02078+Q02080:0.249
ARG E:10 A:10 138.0 0.613 -58.8 125.4 NA NA NA
ARG F:10 B:10 138.0 0.613 -58.7 125.6 NA NA NA
5f28 1 Q8CFN5 85.71 1e-54 X-RAY
 2016-07-13 ARG A:10 NA:NA DO NA DO DO DO NA NA NA
ARG B:10 NA:NA DO NA DO DO DO NA NA NA
ARG C:10 NA:NA DO NA DO DO DO NA NA NA
ARG D:10 NA:NA DO NA DO DO DO NA NA NA
3kov 1 Q02078 85.56 5e-54 X-RAY
 2010-02-16 ARG A:9 A:10 187.0 0.831 -46.8 117.6 120.0 0.533 0.298 B:Q02078:0.298
 DA
DA
 8.865
9.122
 C
O
 OP1
OP2
ARG B:9 B:10 180.0 0.8 -52.1 117.5 118.0 0.524 0.276 A:Q02078:0.276
 DA
 9.416
 O
 OP2
ARG C:9 I:10 184.0 0.818 -51.8 118.2 NA NA NA
ARG D:9 J:10 181.0 0.804 -53.8 117.6 NA NA NA
3p57 1 Q02078 85.56 5e-54 X-RAY
 2011-08-10 ARG A:9 A:10 193.0 0.858 -55.0 132.4 123.0 0.547 0.311 B:Q02078:0.311
 HOH
 2.805
 N
 O
ARG B:9 B:10 201.0 0.893 -55.6 132.9 125.0 0.556 0.337 A:Q02078:0.338
 HOH
 2.662
 O
 O
ARG C:9 C:10 198.0 0.88 -48.4 135.8 131.0 0.582 0.298 D:Q02078:0.298
 HOH
 8.836
 C
 O
ARG D:9 D:10 193.0 0.858 -51.2 126.3 126.0 0.56 0.298 C:Q02078:0.298
 HOH
 3.575
 O
 O
ARG E:9 I:10 194.0 0.862 -47.8 132.7 117.0 0.52 0.342 F:Q02078:0.342
 HOH
 2.842
 NH2
 O
ARG F:9 J:10 194.0 0.862 -47.2 130.9 123.0 0.547 0.315 E:Q02078:0.316
 HOH
 3.152
 CD
 O
1egw 3 Q02078 90.91 1e-47 X-RAY
 2000-03-20 ARG E:9 A:10 146.0 0.649 -48.3 129.6 89.0 0.396 0.253 F:Q02078:0.253
 HOH
 2.984
 N
 O
ARG F:9 B:10 139.0 0.618 -53.7 127.6 84.0 0.373 0.245 E:Q02078:0.244
 HOH
 3.340
 CB
 O
ARG G:9 C:10 146.0 0.649 -48.5 125.7 NA NA NA
ARG H:9 D:10 142.0 0.631 -50.0 129.2 NA NA NA
3mu6 1 Q02078 90.14 5e-42 X-RAY
 2011-11-02 ARG A:9 A:10 148.0 0.658 -46.6 123.3 87.0 0.387 0.271 B:Q02078:0.271
ARG B:9 B:10 150.0 0.667 -45.9 121.8 90.0 0.4 0.267 A:Q02078:0.267
ARG E:9 C:10 151.0 0.671 -46.1 122.0 NA NA NA
ARG F:9 D:10 152.0 0.676 -47.5 122.2 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q02080-f1 1 Q02080 100.0 0.0 ARG A:10 A:10 180.0 0.8 -66.1 117.9