Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 29698816 . T A CCDS12415.1:NM_006003.2:c.464aAg>aTg_NP_005994.2:p.155K>M Homo sapiens ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 (UQCRFS1), mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5gup 53 F1RNZ1 90.15 0.0 EM
2017-03-29 LYS CB:155 2:155 122.0 0.61 -134.9 52.4 43.0 0.215 0.395 XA:None:0.395
LYS EB:155 4:155 132.0 0.66 -140.1 44.1 66.0 0.33 0.33 IB:None:0.33
4d6t 5 P13272 90.15 1e-176 X-RAY
2015-01-14 LYS E:155 NA:NA DO NA DO DO DO NA NA NA
LYS I:155 NA:NA DO NA DO DO DO NA NA NA
LYS O:155 R:77 4.0 0.02 -146.9 -179.4 NA NA NA
4d6u 5 P13272 90.15 1e-176 X-RAY
2015-01-14 LYS E:155 NA:NA DO NA DO DO DO NA NA NA
LYS I:155 NA:NA DO NA DO DO DO NA NA NA
LYS O:155 R:77 5.0 0.025 -129.7 179.1 NA NA NA
5nmi 5 P13272 90.15 1e-176 X-RAY
2017-06-14 LYS E:155 E:77 51.0 0.255 E -99.4 159.7 45.0 0.225 0.03 D:P00125:0.03
LYS I:155 NA:NA DO NA DO DO DO NA NA NA
LYS P:155 NA:NA DO NA DO DO DO NA NA NA
LYS T:155 NA:NA DO NA DO DO DO NA NA NA
6fo0 5 P13272 90.15 1e-176 EM
2018-02-28 LYS E:155 R:77 41.0 0.205 -80.1 -179.5 41.0 0.205 0.0
LYS O:155 E:77 40.0 0.2 -80.2 -179.5 40.0 0.2 0.0
6fo2 5 P13272 90.15 1e-176 EM
2018-02-28 LYS E:155 NA:NA DO NA DO DO DO NA NA NA
LYS O:155 NA:NA DO NA DO DO DO NA NA NA
6fo6 1 P13272 90.15 1e-176 EM
2018-02-28 LYS A:155 E:77 29.0 0.145 E -138.9 178.2 29.0 0.145 0.0
LYS J:155 R:77 31.0 0.155 E -138.9 178.3 31.0 0.155 0.0
4d6t 11 P13272 89.78 4e-176 X-RAY
2015-01-14 LYS S:155 NA:NA DO NA DO DO DO NA NA NA
4d6u 12 P13272 89.78 4e-176 X-RAY
2015-01-14 LYS S:155 NA:NA DO NA DO DO DO NA NA NA
5gpn 5 ? 89.78 4e-176 EM
2017-04-05 LYS E:155 E:77 57.0 NA -161.4 162.6 57.0 NA NA
LYS Q:155 Q:77 84.0 NA -178.4 143.4 84.0 NA NA
5xte 3 P47985 100.0 4e-147 EM
2017-08-30 LYS C:77 C:155 15.0 0.075 -146.4 145.4 15.0 0.075 0.0
LYS N:77 P:155 10.0 0.05 -147.5 140.2 10.0 0.05 0.0
5xth 60 P47985 100.0 4e-147 EM
2017-09-13 LYS IB:77 AC:155 15.0 0.075 -146.4 145.4 15.0 0.075 0.0
LYS TB:77 AP:155 9.0 0.045 -147.5 140.2 9.0 0.045 0.0
5xti 60 P47985 100.0 4e-147 EM
2017-09-13 LYS IB:77 AC:155 17.0 0.085 -146.4 145.4 17.0 0.085 0.0
LYS TB:77 AP:155 9.0 0.045 -147.5 140.2 9.0 0.045 0.0
1bcc 5 P13272 89.29 9e-131 X-RAY
1998-08-19 LYS E:77 E:77 96.0 0.48 E -83.1 106.4 96.0 0.48 0.0
2bcc 5 ? 89.29 9e-131 X-RAY
1999-08-02 LYS E:77 E:77 98.0 0.49 E -79.4 105.2 98.0 0.49 0.0
3bcc 5 P13272 89.29 9e-131 X-RAY
1998-08-19 LYS E:77 E:77 105.0 0.525 E -84.8 100.0 105.0 0.525 0.0
1be3 5 P13272 92.35 1e-129 X-RAY
1999-01-13 LYS E:77 E:77 6.0 0.03 -138.2 150.8 6.0 0.03 0.0
1bgy 5 P13272 92.35 1e-129 X-RAY
1999-01-06 LYS E:77 NA:NA DO NA DO DO DO NA NA NA
LYS P:77 Q:77 123.0 0.615 -178.4 143.4 82.0 0.41 0.205 O:P00125:0.205
1l0l 5 P13272 92.35 1e-129 X-RAY
2003-04-08 LYS E:77 E:77 114.0 0.57 E -105.7 116.2 114.0 0.57 0.0
1l0n 5 P13272 92.35 1e-129 X-RAY
2003-04-08 LYS E:77 E:77 100.0 0.5 E -156.6 123.8 100.0 0.5 0.0
1ntk 5 P13272 92.35 1e-129 X-RAY
2003-10-07 LYS E:77 E:77 101.0 0.505 E -82.0 114.5 101.0 0.505 0.0
1ntm 5 P13272 92.35 1e-129 X-RAY
2003-10-07 LYS E:77 E:77 101.0 0.505 E -77.7 113.6 101.0 0.505 0.0
1ntz 5 P13272 92.35 1e-129 X-RAY
2003-10-07 LYS E:77 E:77 102.0 0.51 E -78.2 110.6 102.0 0.51 0.0
1nu1 5 P13272 92.35 1e-129 X-RAY
2003-10-07 LYS E:77 E:77 105.0 0.525 E -73.6 105.4 105.0 0.525 0.0
1pp9 5 P13272 92.35 1e-129 X-RAY
2004-07-20 LYS E:77 E:77 98.0 0.49 E -75.7 106.2 98.0 0.49 0.0
LYS O:77 R:77 92.0 0.46 E -73.9 108.6 92.0 0.46 0.0
1ppj 5 P13272 92.35 1e-129 X-RAY
2004-07-20 LYS E:77 E:77 109.0 0.545 -90.4 101.8 102.0 0.51 0.035 D:P00125:0.035
LYS O:77 R:77 111.0 0.555 E -91.0 101.5 111.0 0.555 0.0 HOH
8.556
NZ
O
1sqb 5 P13272 92.35 1e-129 X-RAY
2004-09-07 LYS E:77 E:77 85.0 0.425 E -84.6 131.1 85.0 0.425 0.0
1sqp 5 P13272 92.35 1e-129 X-RAY
2005-11-01 LYS E:77 E:77 119.0 0.595 -90.0 127.5 107.0 0.535 0.06 D:P00125:0.06
1sqq 5 P13272 92.35 1e-129 X-RAY
2005-10-25 LYS E:77 E:77 101.0 0.505 E -80.5 108.6 98.0 0.49 0.015 D:P00125:0.015
1sqv 5 P13272 92.35 1e-129 X-RAY
2005-09-06 LYS E:77 E:77 92.0 0.46 E -74.1 136.5 92.0 0.46 0.0
1sqx 4 P13272 92.35 1e-129 X-RAY
2005-09-06 LYS D:77 E:77 102.0 0.51 E -75.0 125.9 102.0 0.51 0.0
2a06 5 P13272 92.35 1e-129 X-RAY
2005-06-21 LYS E:77 E:77 97.0 0.485 -87.4 106.3 91.0 0.455 0.03 D:P00125:0.03
LYS O:77 R:77 95.0 0.475 E -88.6 105.7 95.0 0.475 0.0 HOH
9.172
C
O
2fyu 5 P13272 92.35 1e-129 X-RAY
2006-08-29 LYS E:77 E:77 128.0 0.64 E -87.0 109.2 128.0 0.64 0.0
2ybb 13 P13272 92.35 1e-129 EM
2011-10-19 LYS M:77 E:77 97.0 0.485 E -75.7 106.2 97.0 0.485 0.0
LYS LA:77 e:77 91.0 0.455 E -73.9 108.6 91.0 0.455 0.0
5klv 5 P13272 92.35 1e-129 X-RAY
2016-10-12 LYS E:77 E:77 148.0 0.74 -75.9 118.7 144.0 0.72 0.02 D:P00125:0.02
5luf 5 P13272 92.35 1e-129 EM
2016-11-30 LYS E:77 NA:NA DO NA DO DO DO NA NA NA
LYS P:77 q:77 122.0 0.61 -178.4 143.4 79.0 0.395 0.215 O:P00125:0.215
5okd 5 P13272 92.35 1e-129 X-RAY
2018-02-28 LYS E:77 E:77 101.0 0.505 E -94.5 120.2 101.0 0.505 0.0
6haw 5 P13272 92.35 1e-129 X-RAY
2019-01-16 LYS E:77 E:77 109.0 0.545 E -91.9 121.4 109.0 0.545 0.0
6nhg 5 P13272 92.35 1e-129 X-RAY
2019-06-19 LYS E:77 E:77 98.0 0.49 -78.8 113.3 98.0 0.49 0.0
6xvf 5 P13272 92.35 1e-129 X-RAY
2020-07-22 LYS E:77 E:77 32.0 NA E -89.7 121.1 32.0 NA NA
6zfs 5 P13272 92.35 1e-129 X-RAY
2021-06-30 LYS E:77 E:77 96.0 0.48 E -89.3 123.3 96.0 0.48 0.0
6zft 5 P13272 92.35 1e-129 X-RAY
2021-06-30 LYS E:77 E:77 104.0 0.52 E -94.6 120.4 104.0 0.52 0.0
6zfu 5 P13272 92.35 1e-129 X-RAY
2021-06-30 LYS E:77 E:77 99.0 0.495 E -91.0 120.7 99.0 0.495 0.0
5j4z 55 W5P2X9 91.84 2e-129 EM
2016-09-21 LYS GB:77 AE:77 48.0 NA -138.3 150.9 48.0 NA NA
LYS RB:77 AP:77 49.0 NA -138.3 150.8 49.0 NA NA
5j7y 55 W5P2X9 91.84 2e-129 EM
2016-09-21 LYS GB:77 AE:77 48.0 NA -138.3 150.9 48.0 NA NA
LYS RB:77 AP:77 49.0 NA -138.3 150.9 49.0 NA NA
5j8k 55 W5P2X9 91.84 2e-129 EM
2016-09-21 LYS GB:77 AE:77 49.0 NA -138.2 150.9 49.0 NA NA
LYS RB:77 AP:77 49.0 NA -138.3 150.9 49.0 NA NA
6q9e 5 W5P2X9 91.84 2e-129 EM
2019-08-21 LYS E:77 f1:77 94.0 0.47 E -90.7 142.3 94.0 0.47 0.0
LYS O:77 f2:77 107.0 0.535 E -98.3 140.0 86.0 0.43 0.105 N:W5Q0A9:0.105
6qbx 5 W5P2X9 91.84 2e-129 EM
2019-08-21 LYS E:77 f1:77 101.0 0.505 -86.2 125.1 101.0 0.505 0.0
LYS O:77 f2:77 97.0 0.485 E -125.3 130.7 97.0 0.485 0.0
6qc2 33 W5P2X9 91.84 2e-129 EM
2019-08-21 LYS GA:77 f1:77 96.0 0.48 E -83.0 135.1 96.0 0.48 0.0
LYS QA:77 f2:77 112.0 0.56 E -113.9 129.8 88.0 0.44 0.12 PA:W5Q0A9:0.12
6qc3 5 W5P2X9 91.84 2e-129 EM
2019-08-21 LYS E:77 f1:77 120.0 0.6 E -92.1 140.4 120.0 0.6 0.0
LYS O:77 f2:77 115.0 0.575 E -84.4 136.2 87.0 0.435 0.14 N:W5Q0A9:0.14
6qc4 5 W5P2X9 91.84 2e-129 EM
2019-08-21 LYS E:77 f1:77 98.0 0.49 E -90.8 142.6 98.0 0.49 0.0
LYS O:77 f2:77 96.0 0.48 E -84.7 106.9 74.0 0.37 0.11 N:W5Q0A9:0.11
7o37 5 Q9CR68 91.33 2e-129 EM
2021-10-13 LYS E:77 E:77 12.0 0.06 -87.5 124.6 12.0 0.06 0.0
LYS O:77 P:77 10.0 0.05 -106.8 175.3 10.0 0.05 0.0
7o3c 5 Q9CR68 91.33 2e-129 EM
2021-10-13 LYS E:77 E:77 3.0 0.015 -73.3 147.1 3.0 0.015 0.0
LYS O:77 P:77 4.0 0.02 -107.8 174.1 4.0 0.02 0.0
7o3e 8 Q9CR68 91.33 2e-129 EM
2021-10-13 LYS K:77 NA:NA DO NA DO DO DO NA NA NA
7o3h 5 Q9CR68 91.33 2e-129 EM
2021-10-13 LYS E:77 E:77 6.0 0.03 -68.0 -31.8 6.0 0.03 0.0
LYS O:77 P:77 9.0 0.045 -133.7 154.0 9.0 0.045 0.0
3cwb 5 ? 80.51 1e-121 X-RAY
2008-08-12 LYS E:77 E:77 111.0 0.555 -104.1 101.7 90.0 0.45 0.105 D:None:0.105
LYS O:77 R:77 110.0 0.55 -104.0 112.3 110.0 0.55 0.0
3h1h 5 Q5ZLR5 80.51 1e-121 X-RAY
2009-04-28 LYS E:77 E:77 117.0 0.585 -84.7 105.3 117.0 0.585 0.0
LYS O:77 R:77 117.0 0.585 E -85.6 105.7 117.0 0.585 0.0
3h1i 5 Q5ZLR5 80.51 1e-121 X-RAY
2009-04-28 LYS E:77 E:77 104.0 0.52 E -69.1 112.2 104.0 0.52 0.0
LYS O:77 R:77 100.0 0.5 E -67.7 111.7 100.0 0.5 0.0
3h1j 5 Q5ZLR5 80.51 1e-121 X-RAY
2009-04-28 LYS E:77 E:77 102.0 0.51 -75.6 109.4 102.0 0.51 0.0
LYS O:77 R:77 103.0 0.515 -76.0 110.6 103.0 0.515 0.0
3h1k 5 Q5ZLR5 80.51 1e-121 X-RAY
2009-04-28 LYS E:77 E:77 110.0 0.55 -77.2 120.3 110.0 0.55 0.0
LYS O:77 R:77 113.0 0.565 E -78.0 119.1 113.0 0.565 0.0
3h1l 5 Q5ZLR5 80.51 1e-121 X-RAY
2010-01-05 LYS E:77 E:77 98.0 0.49 -80.8 122.1 98.0 0.49 0.0
LYS O:77 R:77 103.0 0.515 -80.4 122.9 103.0 0.515 0.0
3l70 5 Q5ZLR5 80.51 1e-121 X-RAY
2010-02-02 LYS E:77 E:77 107.0 0.535 -87.7 104.6 107.0 0.535 0.0
LYS O:77 R:77 109.0 0.545 E -88.4 103.9 109.0 0.545 0.0
3l71 5 Q5ZLR5 80.51 1e-121 X-RAY
2010-02-02 LYS E:77 E:77 110.0 0.55 -89.4 105.8 110.0 0.55 0.0
LYS O:77 R:77 109.0 0.545 E -90.0 105.8 109.0 0.545 0.0
3l72 5 Q5ZLR5 80.51 1e-121 X-RAY
2010-02-02 LYS E:77 E:77 106.0 0.53 -87.0 111.1 106.0 0.53 0.0
LYS O:77 R:77 108.0 0.54 E -86.2 111.9 108.0 0.54 0.0
3l73 5 Q5ZLR5 80.51 1e-121 X-RAY
2010-02-02 LYS E:77 E:77 108.0 0.54 -94.4 106.9 108.0 0.54 0.0
LYS O:77 R:77 109.0 0.545 E -94.9 106.8 109.0 0.545 0.0
3l74 5 Q5ZLR5 80.51 1e-121 X-RAY
2010-02-02 LYS E:77 E:77 102.0 0.51 -74.1 127.1 80.0 0.4 0.11 D:D0VX26:0.11
LYS O:77 R:77 110.0 0.55 -72.6 128.2 88.0 0.44 0.11 N:D0VX26:0.11
3l75 5 Q5ZLR5 80.51 1e-121 X-RAY
2010-02-02 LYS E:77 E:77 103.0 0.515 -72.6 124.5 84.0 0.42 0.095 D:D0VX26:0.095
LYS O:77 R:77 108.0 0.54 -70.6 125.8 87.0 0.435 0.105 N:D0VX26:0.105
3tgu 5 Q5ZLR5 80.51 1e-121 X-RAY
2012-07-04 LYS E:77 E:77 117.0 0.585 -90.0 104.5 117.0 0.585 0.0
LYS O:77 R:77 114.0 0.57 E -89.8 105.9 114.0 0.57 0.0
4u3f 5 Q5ZLR5 80.51 1e-121 X-RAY
2015-07-29 LYS E:77 E:77 93.0 0.465 E -67.0 111.7 93.0 0.465 0.0
LYS O:77 R:77 111.0 0.555 E -80.3 122.9 100.0 0.5 0.055 N:D0VX26:0.055
1rie 1 P13272 93.8 4e-91 X-RAY
1996-12-07 LYS A:10 A:77 105.0 0.525 E -83.3 111.0 105.0 0.525 0.0 HOH
2.774
O
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p47985-f1 1 P47985 100.0 0.0 LYS A:155 A:155 94.0 0.47 E -80.9 121.9
af-p0c7p4-f1 1 P0C7P4 98.53 0.0 LYS A:164 A:164 93.0 0.465 E -80.7 122.6