Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 34856187 . C A CCDS54246.1:NM_001184722.1:c.133Cgg>Agg_NP_001171651.1:p.45R>R Homo sapiens glucose-6-phosphate isomerase (GPI), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1iri 1 P06744 94.98 0.0 X-RAY
 2002-06-05 ARG A:6 A:6 162.0 0.72 H -80.9 -14.7 162.0 0.72 0.0 HOH
 6.742
 NH1
 O
ARG B:6 B:6 142.0 0.631 H -77.6 -21.5 142.0 0.631 0.0 HOH
 6.909
 N
 O
ARG C:6 C:6 138.0 0.613 T -85.5 11.3 NA NA NA
ARG D:6 D:6 133.0 0.591 H -81.3 -31.1 NA NA NA
1jiq 1 P06744 94.98 0.0 X-RAY
 2002-06-19 ARG A:6 A:6 165.0 0.733 H -81.9 -17.0 165.0 0.733 0.0 HOH
 2.965
 CD
 O
ARG B:6 B:6 172.0 0.764 H -84.4 -11.8 172.0 0.764 0.0 HOH
 4.000
 C
 O
ARG C:6 C:6 136.0 0.604 T -78.9 -6.9 NA NA NA
ARG D:6 D:6 131.0 0.582 T -83.2 -2.0 NA NA NA
1nuh 1 P06744 94.98 0.0 X-RAY
 2003-02-11 ARG A:6 A:5 200.0 0.889 H -76.3 -14.0 200.0 0.889 0.0 HOH
 4.262
 CB
 O
1jlh 1 P06744 94.8 0.0 X-RAY
 2003-02-11 ARG A:6 A:5 163.0 0.724 H -85.9 -8.6 163.0 0.724 0.0 HOH
 2.720
 CZ
 O
ARG B:6 B:5 158.0 0.702 H -79.1 -10.2 158.0 0.702 0.0 HOH
 3.849
 C
 O
ARG C:6 C:5 183.0 0.813 T -86.2 0.5 NA NA NA
ARG D:6 D:5 195.0 0.867 T -89.0 0.1 NA NA NA
1iat 1 P06744 94.97 0.0 X-RAY
 2001-05-30 ARG A:5 A:5 199.0 0.884 H -86.5 -7.5 199.0 0.884 0.0 HOH
 2.932
 NH2
 O
6xuh 1 P06744 94.96 0.0 X-RAY
 2020-07-29 ARG A:5 A:5 204.0 0.907 H -78.8 -21.8 204.0 0.907 0.0 HOH
 6.615
 N
 O
ARG B:5 B:5 205.0 0.911 H -78.8 -21.9 205.0 0.911 0.0 HOH
 6.949
 CD
 O
ARG C:5 C:5 178.0 0.791 H -78.8 -21.8 NA NA NA
ARG D:5 D:5 207.0 0.92 H -78.8 -21.8 NA NA NA
6xui 1 P06744 94.96 0.0 X-RAY
 2020-07-29 ARG A:5 A:5 189.0 0.84 H -83.4 -13.5 189.0 0.84 0.0 HOH
 2.777
 NH1
 O
ARG B:5 B:5 144.0 0.64 H -78.2 -15.2 NA NA NA
ARG C:5 C:5 192.0 0.853 H -80.5 -17.3 NA NA NA
ARG D:5 D:5 168.0 0.747 H -75.1 -22.5 168.0 0.747 0.0 HOH
 4.370
 NH1
 O
1gzd 1 P08059 88.51 0.0 X-RAY
 2002-06-10 GLN A:5 A:5 114.0 0.633 G -99.9 -3.5 114.0 0.633 0.0 HOH
 6.752
 N
 O
1gzv 1 P08059 88.51 0.0 X-RAY
 2002-10-31 GLN A:5 A:5 116.0 0.644 G -100.1 0.4 116.0 0.644 0.0
1g98 1 Q9N1E2 87.81 0.0 X-RAY
 2001-06-01 ARG A:6 A:5 214.0 0.951 T -100.0 -1.3 214.0 0.951 0.0 HOH
 2.990
 CG
 O
ARG B:6 B:5 207.0 0.92 H -91.7 -11.8 207.0 0.92 0.0 HOH
 3.404
 O
 O
1hm5 1 Q9N1E2 87.81 0.0 X-RAY
 2002-09-27 ARG A:6 A:5 169.0 0.751 H -93.3 -5.4 169.0 0.751 0.0 HOH
 3.877
 NH1
 O
ARG B:6 B:5 208.0 0.924 H -87.3 -7.5 208.0 0.924 0.0 HOH
 3.016
 CG
 O
1hox 1 Q9N1E2 87.81 0.0 X-RAY
 2001-07-20 ARG A:6 A:5 178.0 0.791 T -109.1 2.1 178.0 0.791 0.0 HOH
 5.243
 NH2
 O
ARG B:6 B:5 171.0 0.76 H -92.3 -21.7 171.0 0.76 0.0 HOH
 2.985
 CG
 O
1xtb 1 Q9N1E2 87.81 0.0 X-RAY
 2005-03-22 ARG A:6 A:5 187.0 0.831 H -93.1 -22.0 187.0 0.831 0.0 HOH
 5.912
 C
 O
ARG B:6 B:1005 213.0 0.947 H -88.9 -16.2 213.0 0.947 0.0 HOH
 5.722
 C
 O
1n8t 1 Q9N1E2 87.97 0.0 X-RAY
 2003-03-04 ARG A:5 A:5 192.0 0.853 T -83.8 -19.6 192.0 0.853 0.0 HOH
 5.884
 C
 O
ARG B:5 B:5 209.0 0.929 H -87.8 -8.2 209.0 0.929 0.0 HOH
 6.027
 C
 O
1dqr 1 Q9N1E2 87.79 0.0 X-RAY
 2000-02-09 ARG A:5 A:5 155.0 0.689 T -90.6 -40.0 155.0 0.689 0.0 HOH
 3.806
 NH2
 O
ARG B:5 B:5 175.0 0.778 T -97.4 3.8 175.0 0.778 0.0 HOH
 3.701
 O
 O
1koj 1 Q9N1E2 87.79 0.0 X-RAY
 2002-05-03 ARG A:5 A:5 182.0 0.809 T -86.8 0.2 182.0 0.809 0.0 HOH
 3.003
 CG
 O
ARG B:5 B:5 212.0 0.942 H -85.8 -5.5 212.0 0.942 0.0 HOH
 3.355
 CD
 O
2cvp 1 P06745 84.38 0.0 X-RAY
 2006-05-23 ARG A:6 A:6 166.0 0.738 H -74.8 -21.5 166.0 0.738 0.0 HOH
 2.667
 O
 O
ARG B:6 B:6 159.0 0.707 H -82.1 -9.4 159.0 0.707 0.0 HOH
 3.606
 C
 O
2cxn 1 P06745 84.38 0.0 X-RAY
 2006-05-23 ARG A:6 A:6 168.0 0.747 H -78.3 -16.7 168.0 0.747 0.0 HOH
 2.723
 O
 O
ARG B:6 B:6 163.0 0.724 T -85.0 -6.3 163.0 0.724 0.0 HOH
 2.711
 O
 O
2cxo 1 P06745 84.38 0.0 X-RAY
 2006-05-23 ARG A:6 A:6 169.0 0.751 H -80.1 -13.6 169.0 0.751 0.0 HOH
 3.278
 O
 O
ARG B:6 B:6 163.0 0.724 T -85.6 -7.1 163.0 0.724 0.0 HOH
 3.145
 NH2
 O
2cxp 1 P06745 84.38 0.0 X-RAY
 2006-05-23 ARG A:6 A:6 166.0 0.738 H -77.1 -20.1 166.0 0.738 0.0 HOH
 3.326
 NH1
 O
ARG B:6 B:6 161.0 0.716 T -86.1 -6.9 161.0 0.716 0.0 HOH
 2.650
 O
 O
2cxq 1 P06745 84.38 0.0 X-RAY
 2006-05-23 ARG A:6 A:6 171.0 0.76 H -78.0 -14.5 171.0 0.76 0.0 HOH
 2.684
 O
 O
ARG B:6 B:6 162.0 0.72 T -85.5 -6.3 162.0 0.72 0.0 HOH
 2.659
 O
 O
2cxr 1 P06745 84.38 0.0 X-RAY
 2006-05-23 ARG A:6 A:6 167.0 0.742 H -80.1 -16.2 167.0 0.742 0.0 HOH
 3.121
 NE
 O
ARG B:6 B:6 162.0 0.72 T -84.9 -7.6 162.0 0.72 0.0 HOH
 2.904
 NH2
 O
2cxs 1 P06745 84.38 0.0 X-RAY
 2006-05-23 ARG A:6 A:6 170.0 0.756 H -78.9 -14.1 170.0 0.756 0.0 HOH
 2.678
 O
 O
ARG B:6 B:6 164.0 0.729 H -85.7 -7.7 164.0 0.729 0.0 HOH
 2.772
 O
 O
2cxt 1 P06745 84.38 0.0 X-RAY
 2006-05-23 ARG A:6 A:6 171.0 0.76 H -78.0 -16.1 171.0 0.76 0.0 HOH
 3.077
 NH1
 O
ARG B:6 B:6 164.0 0.729 T -84.8 -7.6 164.0 0.729 0.0 HOH
 2.794
 O
 O
2cxu 1 P06745 84.38 0.0 X-RAY
 2006-05-23 ARG A:6 A:6 165.0 0.733 H -78.8 -16.9 165.0 0.733 0.0 HOH
 3.310
 O
 O
ARG B:6 B:6 159.0 0.707 T -85.1 -4.1 159.0 0.707 0.0 HOH
 2.735
 O
 O
1u0e 1 P06745 84.05 0.0 X-RAY
 2004-11-02 ARG A:6 A:5 200.0 0.889 H -84.1 -10.5 200.0 0.889 0.0 SO4
HOH
 3.391
3.391
 CD
O
 O4
O
ARG B:6 B:5 198.0 0.88 H -85.9 -6.7 198.0 0.88 0.0 SO4
GOL
HOH
 8.014
6.999
3.596
 NH2
O
C
 O2
O2
O
1u0f 1 P06745 84.05 0.0 X-RAY
 2004-11-02 ARG A:6 A:5 216.0 0.96 H -82.5 -13.8 216.0 0.96 0.0 SO4
HOH
 3.558
3.452
 CD
O
 O4
O
ARG B:6 B:5 201.0 0.893 H -90.1 -7.0 201.0 0.893 0.0 SO4
GOL
HOH
 8.584
6.994
3.607
 NH2
O
CD
 O2
O2
O
1u0g 1 P06745 84.05 0.0 X-RAY
 2004-11-02 ARG A:6 A:5 182.0 0.809 H -81.9 -13.7 182.0 0.809 0.0 SO4
HOH
 3.213
3.208
 CD
NH1
 O4
O
ARG B:6 B:5 200.0 0.889 H -88.0 -5.5 200.0 0.889 0.0 SO4
GOL
HOH
 7.560
6.879
2.630
 NH2
O
O
 O2
O2
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p06744-f1 1 P06744 94.98 0.0 ARG A:6 A:6 158.0 0.702 T -85.3 -12.1