Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 34856230 . A C CCDS54246.1:NM_001184722.1:c.176cAc>cCc_NP_001171651.1:p.59H>P Homo sapiens glucose-6-phosphate isomerase (GPI), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1iri 1 P06744 94.98 0.0 X-RAY
 2002-06-05 HIS A:20 A:20 53.0 0.272 H -105.2 -3.2 53.0 0.272 0.0
HIS B:20 B:20 42.0 0.215 H -113.7 -17.5 42.0 0.215 0.0 HOH
 5.034
 CE1
 O
HIS C:20 C:20 52.0 0.267 H -131.5 -10.0 NA NA NA
HIS D:20 D:20 59.0 0.303 H -129.6 -5.0 NA NA NA
1jiq 1 P06744 94.98 0.0 X-RAY
 2002-06-19 HIS A:20 A:20 55.0 0.282 H -115.5 7.2 55.0 0.282 0.0 HOH
 4.533
 NE2
 O
HIS B:20 B:20 43.0 0.221 H -125.3 -10.2 43.0 0.221 0.0 HOH
 5.420
 CE1
 O
HIS C:20 C:20 58.0 0.297 H -127.0 4.3 NA NA NA
HIS D:20 D:20 64.0 0.328 H -131.1 -7.8 NA NA NA
1nuh 1 P06744 94.98 0.0 X-RAY
 2003-02-11 HIS A:20 A:19 40.0 0.205 H -120.7 -6.5 40.0 0.205 0.0 HOH
 3.358
 N
 O
1jlh 1 P06744 94.8 0.0 X-RAY
 2003-02-11 HIS A:20 A:19 45.0 0.231 H -115.8 13.4 45.0 0.231 0.0 HOH
 6.502
 CD2
 O
HIS B:20 B:19 46.0 0.236 H -109.8 7.1 46.0 0.236 0.0 HOH
 5.304
 CD2
 O
HIS C:20 C:19 51.0 0.262 H -119.3 10.8 NA NA NA
HIS D:20 D:19 51.0 0.262 H -126.0 7.7 NA NA NA
1iat 1 P06744 94.97 0.0 X-RAY
 2001-05-30 HIS A:19 A:19 53.0 0.272 H -119.3 5.7 53.0 0.272 0.0 HOH
 3.740
 ND1
 O
6xuh 1 P06744 94.96 0.0 X-RAY
 2020-07-29 HIS A:19 A:19 65.0 0.333 H -116.6 27.7 65.0 0.333 0.0
HIS B:19 B:19 57.0 0.292 H -116.8 28.1 57.0 0.292 0.0 HOH
 4.605
 NE2
 O
HIS C:19 C:19 54.0 0.277 H -116.7 28.3 NA NA NA
HIS D:19 D:19 57.0 0.292 H -116.8 27.7 NA NA NA
6xui 1 P06744 94.96 0.0 X-RAY
 2020-07-29 HIS A:19 A:19 64.0 0.328 H -114.5 1.9 64.0 0.328 0.0 PG6
HOH
 6.859
3.652
 O
C
 C1
O
HIS B:19 B:19 52.0 0.267 H -111.4 2.2 NA NA NA
HIS C:19 C:19 62.0 0.318 H -117.0 -3.5 NA NA NA
HIS D:19 D:19 65.0 0.333 H -108.8 1.5 65.0 0.333 0.0 PG6
HOH
 7.078
3.809
 O
NE2
 C12
O
1gzd 1 P08059 88.51 0.0 X-RAY
 2002-06-10 HIS A:19 A:19 47.0 0.241 H -117.5 -0.5 47.0 0.241 0.0 HOH
 8.973
 ND1
 O
1gzv 1 P08059 88.51 0.0 X-RAY
 2002-10-31 HIS A:19 A:19 48.0 0.246 H -119.5 -1.6 48.0 0.246 0.0
1g98 1 Q9N1E2 87.81 0.0 X-RAY
 2001-06-01 HIS A:20 A:19 68.0 0.349 H -129.0 -14.0 68.0 0.349 0.0 HOH
 4.396
 C
 O
HIS B:20 B:19 73.0 0.374 H -147.6 -14.5 73.0 0.374 0.0 HOH
 4.157
 C
 O
1hm5 1 Q9N1E2 87.81 0.0 X-RAY
 2002-09-27 HIS A:20 A:19 73.0 0.374 H -125.3 -8.8 73.0 0.374 0.0 HOH
 2.651
 ND1
 O
HIS B:20 B:19 75.0 0.385 H -129.8 -26.8 75.0 0.385 0.0 HOH
 4.393
 C
 O
1hox 1 Q9N1E2 87.81 0.0 X-RAY
 2001-07-20 HIS A:20 A:19 48.0 0.246 H -120.5 -33.3 48.0 0.246 0.0 HOH
 4.561
 CB
 O
HIS B:20 B:19 90.0 0.462 T -152.5 -57.2 90.0 0.462 0.0 HOH
 4.522
 NE2
 O
1xtb 1 Q9N1E2 87.81 0.0 X-RAY
 2005-03-22 HIS A:20 A:19 56.0 0.287 H -125.9 -3.4 56.0 0.287 0.0 HOH
 5.641
 O
 O
HIS B:20 B:1019 63.0 0.323 H -130.7 -8.6 63.0 0.323 0.0 HOH
 5.737
 O
 O
1n8t 1 Q9N1E2 87.97 0.0 X-RAY
 2003-03-04 HIS A:19 A:19 62.0 0.318 H -123.8 -11.2 62.0 0.318 0.0 HOH
 5.743
 O
 O
HIS B:19 B:19 73.0 0.374 H -119.4 -13.5 73.0 0.374 0.0 HOH
 5.433
 O
 O
1dqr 1 Q9N1E2 87.79 0.0 X-RAY
 2000-02-09 HIS A:19 A:19 96.0 0.492 H -116.5 -0.7 96.0 0.492 0.0 HOH
 3.157
 ND1
 O
HIS B:19 B:19 73.0 0.374 S -156.0 163.2 73.0 0.374 0.0 HOH
 2.975
 O
 O
1koj 1 Q9N1E2 87.79 0.0 X-RAY
 2002-05-03 HIS A:19 A:19 94.0 0.482 T -146.2 -33.6 94.0 0.482 0.0 HOH
 3.167
 NE2
 O
HIS B:19 B:19 82.0 0.421 I -144.9 -23.7 82.0 0.421 0.0 HOH
 3.582
 CD2
 O
2cvp 1 P06745 84.38 0.0 X-RAY
 2006-05-23 ASN A:20 A:20 55.0 0.344 H -121.6 -24.8 55.0 0.344 0.0 HOH
 3.168
 OD1
 O
ASN B:20 B:20 52.0 0.325 H -124.3 -18.9 52.0 0.325 0.0 HOH
 6.097
 ND2
 O
2cxn 1 P06745 84.38 0.0 X-RAY
 2006-05-23 ASN A:20 A:20 59.0 0.369 H -123.7 -22.0 59.0 0.369 0.0 HOH
 2.927
 ND2
 O
ASN B:20 B:20 55.0 0.344 H -126.0 -17.9 55.0 0.344 0.0 HOH
 2.802
 ND2
 O
2cxo 1 P06745 84.38 0.0 X-RAY
 2006-05-23 ASN A:20 A:20 58.0 0.362 H -124.9 -21.7 58.0 0.362 0.0 HOH
 3.118
 OD1
 O
ASN B:20 B:20 48.0 0.3 H -124.6 -18.4 48.0 0.3 0.0 HOH
 3.580
 N
 O
2cxp 1 P06745 84.38 0.0 X-RAY
 2006-05-23 ASN A:20 A:20 58.0 0.362 H -125.8 -21.8 58.0 0.362 0.0 HOH
 3.298
 OD1
 O
ASN B:20 B:20 51.0 0.319 H -123.1 -20.5 51.0 0.319 0.0 HOH
 3.529
 N
 O
2cxq 1 P06745 84.38 0.0 X-RAY
 2006-05-23 ASN A:20 A:20 59.0 0.369 H -123.7 -21.8 59.0 0.369 0.0 HOH
 2.901
 OD1
 O
ASN B:20 B:20 52.0 0.325 H -127.0 -16.1 52.0 0.325 0.0 HOH
 3.512
 N
 O
2cxr 1 P06745 84.38 0.0 X-RAY
 2006-05-23 ASN A:20 A:20 59.0 0.369 H -123.6 -23.4 59.0 0.369 0.0 HOH
 2.885
 ND2
 O
ASN B:20 B:20 51.0 0.319 H -126.1 -17.4 51.0 0.319 0.0 HOH
 3.542
 N
 O
2cxs 1 P06745 84.38 0.0 X-RAY
 2006-05-23 ASN A:20 A:20 57.0 0.356 H -121.8 -22.8 57.0 0.356 0.0 HOH
 3.058
 OD1
 O
ASN B:20 B:20 53.0 0.331 H -126.7 -17.1 53.0 0.331 0.0 HOH
 3.015
 OD1
 O
2cxt 1 P06745 84.38 0.0 X-RAY
 2006-05-23 ASN A:20 A:20 60.0 0.375 H -120.7 -19.4 60.0 0.375 0.0 HOH
 2.892
 ND2
 O
ASN B:20 B:20 55.0 0.344 H -124.8 -19.7 55.0 0.344 0.0 HOH
 3.157
 O
 O
2cxu 1 P06745 84.38 0.0 X-RAY
 2006-05-23 ASN A:20 A:20 58.0 0.362 H -125.9 -20.1 58.0 0.362 0.0 HOH
 3.160
 OD1
 O
ASN B:20 B:20 59.0 0.369 H -124.1 -18.8 59.0 0.369 0.0 HOH
 2.902
 ND2
 O
1u0e 1 P06745 84.05 0.0 X-RAY
 2004-11-02 ASN A:20 A:19 59.0 0.369 H -133.1 -20.4 59.0 0.369 0.0 HOH
 3.055
 ND2
 O
ASN B:20 B:19 56.0 0.35 H -126.9 -17.2 56.0 0.35 0.0 HOH
 3.869
 N
 O
1u0f 1 P06745 84.05 0.0 X-RAY
 2004-11-02 ASN A:20 A:19 57.0 0.356 H -126.3 -22.6 57.0 0.356 0.0 HOH
 3.671
 N
 O
ASN B:20 B:19 63.0 0.394 H -122.0 -19.8 63.0 0.394 0.0 HOH
 3.580
 N
 O
1u0g 1 P06745 84.05 0.0 X-RAY
 2004-11-02 ASN A:20 A:19 61.0 0.381 H -123.1 -20.1 61.0 0.381 0.0 HOH
 4.254
 OD1
 O
ASN B:20 B:19 72.0 0.45 H -123.5 -15.4 72.0 0.45 0.0 HOH
 2.629
 O
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p06744-f1 1 P06744 94.98 0.0 HIS A:20 A:20 54.0 0.277 H -119.4 -0.8