Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 34857722 . G A CCDS54246.1:NM_001184722.1:c.365cGg>cAg_NP_001171651.1:p.122R>Q Homo sapiens glucose-6-phosphate isomerase (GPI), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1iri 1 P06744 94.98 0.0 X-RAY
 2002-06-05 ARG A:83 A:83 73.0 0.324 H -58.9 -39.8 73.0 0.324 0.0 HOH
 2.850
 NH1
 O
ARG B:83 B:83 91.0 0.404 H -51.5 -40.3 91.0 0.404 0.0 HOH
 3.637
 CG
 O
ARG C:83 C:83 78.0 0.347 H -62.5 -41.8 NA NA NA
ARG D:83 D:83 87.0 0.387 H -55.4 -48.8 NA NA NA
1jiq 1 P06744 94.98 0.0 X-RAY
 2002-06-19 ARG A:83 A:83 78.0 0.347 H -60.0 -42.4 78.0 0.347 0.0 HOH
 3.207
 NH1
 O
ARG B:83 B:83 82.0 0.364 H -59.6 -43.3 82.0 0.364 0.0 HOH
 2.535
 NH2
 O
ARG C:83 C:83 86.0 0.382 H -58.3 -43.7 NA NA NA
ARG D:83 D:83 83.0 0.369 H -61.2 -39.9 NA NA NA
1nuh 1 P06744 94.98 0.0 X-RAY
 2003-02-11 ARG A:83 A:82 83.0 0.369 H -60.1 -47.8 83.0 0.369 0.0 HOH
 3.561
 CG
 O
1jlh 1 P06744 94.8 0.0 X-RAY
 2003-02-11 ARG A:83 A:82 76.0 0.338 H -60.8 -38.3 76.0 0.338 0.0 HOH
 2.618
 NH2
 O
ARG B:83 B:82 71.0 0.316 H -61.6 -40.9 71.0 0.316 0.0 HOH
 2.547
 NH2
 O
ARG C:83 C:82 75.0 0.333 H -61.5 -39.7 NA NA NA
ARG D:83 D:82 73.0 0.324 H -58.7 -44.0 NA NA NA
1iat 1 P06744 94.97 0.0 X-RAY
 2001-05-30 ARG A:82 A:82 98.0 0.436 H -62.1 -39.1 98.0 0.436 0.0 HOH
 3.041
 NH1
 O
6xuh 1 P06744 94.96 0.0 X-RAY
 2020-07-29 ARG A:82 A:82 86.0 0.382 H -53.7 -39.4 86.0 0.382 0.0 HOH
 9.422
 N
 O
ARG B:82 B:82 97.0 0.431 H -53.4 -39.5 97.0 0.431 0.0 HOH
 2.555
 NH1
 O
ARG C:82 C:82 89.0 0.396 H -53.4 -39.2 NA NA NA
ARG D:82 D:82 92.0 0.409 H -53.2 -39.6 NA NA NA
6xui 1 P06744 94.96 0.0 X-RAY
 2020-07-29 ARG A:82 A:82 100.0 0.444 H -59.9 -40.5 100.0 0.444 0.0 HOH
 3.179
 NH1
 O
ARG B:82 B:82 83.0 0.369 H -60.3 -42.6 NA NA NA
ARG C:82 C:82 94.0 0.418 H -59.3 -44.0 NA NA NA
ARG D:82 D:82 100.0 0.444 H -63.8 -41.0 100.0 0.444 0.0 HOH
 3.075
 NH2
 O
1gzd 1 P08059 88.51 0.0 X-RAY
 2002-06-10 ARG A:82 A:82 86.0 0.382 H -58.6 -40.5 86.0 0.382 0.0 HOH
 3.029
 CD
 O
1gzv 1 P08059 88.51 0.0 X-RAY
 2002-10-31 ARG A:82 A:82 89.0 0.396 H -57.7 -40.4 89.0 0.396 0.0
1g98 1 Q9N1E2 87.81 0.0 X-RAY
 2001-06-01 SER A:83 A:82 27.0 0.235 H -58.1 -42.1 27.0 0.235 0.0 HOH
 3.227
 OG
 O
SER B:83 B:82 26.0 0.226 H -62.1 -38.4 26.0 0.226 0.0 HOH
 3.029
 OG
 O
1hm5 1 Q9N1E2 87.81 0.0 X-RAY
 2002-09-27 SER A:83 A:82 26.0 0.226 H -58.0 -40.7 26.0 0.226 0.0 HOH
 3.268
 OG
 O
SER B:83 B:82 26.0 0.226 H -60.6 -39.4 26.0 0.226 0.0 HOH
 3.222
 OG
 O
1hox 1 Q9N1E2 87.81 0.0 X-RAY
 2001-07-20 SER A:83 A:82 25.0 0.217 H -58.8 -43.3 25.0 0.217 0.0 HOH
 3.600
 N
 O
SER B:83 B:82 24.0 0.209 H -62.3 -36.7 24.0 0.209 0.0 HOH
 2.692
 OG
 O
1xtb 1 Q9N1E2 87.81 0.0 X-RAY
 2005-03-22 SER A:83 A:82 26.0 0.226 H -57.7 -35.9 26.0 0.226 0.0 HOH
 3.115
 OG
 O
SER B:83 B:1082 26.0 0.226 H -60.5 -39.1 26.0 0.226 0.0 HOH
 3.277
 OG
 O
1n8t 1 Q9N1E2 87.97 0.0 X-RAY
 2003-03-04 SER A:82 A:82 25.0 0.217 H -58.6 -41.9 25.0 0.217 0.0 HOH
 3.715
 O
 O
SER B:82 B:82 28.0 0.243 H -54.3 -44.1 28.0 0.243 0.0 HOH
 3.880
 N
 O
1dqr 1 Q9N1E2 87.79 0.0 X-RAY
 2000-02-09 SER A:82 A:82 25.0 0.217 H -60.6 -36.1 25.0 0.217 0.0 HOH
 4.014
 O
 O
SER B:82 B:82 26.0 0.226 H -60.6 -35.3 26.0 0.226 0.0 HOH
 3.335
 OG
 O
1koj 1 Q9N1E2 87.79 0.0 X-RAY
 2002-05-03 SER A:82 A:82 24.0 0.209 H -59.9 -38.6 24.0 0.209 0.0 HOH
 3.526
 OG
 O
SER B:82 B:82 26.0 0.226 H -59.9 -37.0 26.0 0.226 0.0 HOH
 3.206
 OG
 O
2cvp 1 P06745 84.38 0.0 X-RAY
 2006-05-23 ASN A:83 A:83 74.0 0.463 H -62.4 -43.9 74.0 0.463 0.0 HOH
 3.888
 O
 O
ASN B:83 B:83 74.0 0.463 H -60.8 -42.8 74.0 0.463 0.0 HOH
 2.886
 OD1
 O
2cxn 1 P06745 84.38 0.0 X-RAY
 2006-05-23 ASN A:83 A:83 73.0 0.456 H -64.0 -40.2 73.0 0.456 0.0 HOH
 2.700
 OD1
 O
ASN B:83 B:83 73.0 0.456 H -63.0 -41.8 73.0 0.456 0.0 HOH
 2.979
 OD1
 O
2cxo 1 P06745 84.38 0.0 X-RAY
 2006-05-23 ASN A:83 A:83 73.0 0.456 H -63.5 -41.2 73.0 0.456 0.0 HOH
 2.781
 ND2
 O
ASN B:83 B:83 72.0 0.45 H -64.0 -41.8 72.0 0.45 0.0 HOH
 2.765
 ND2
 O
2cxp 1 P06745 84.38 0.0 X-RAY
 2006-05-23 ASN A:83 A:83 73.0 0.456 H -62.7 -40.8 73.0 0.456 0.0 HOH
 2.981
 ND2
 O
ASN B:83 B:83 73.0 0.456 H -63.3 -38.3 73.0 0.456 0.0 HOH
 2.875
 ND2
 O
2cxq 1 P06745 84.38 0.0 X-RAY
 2006-05-23 ASN A:83 A:83 73.0 0.456 H -65.2 -39.6 73.0 0.456 0.0 HOH
 2.819
 ND2
 O
ASN B:83 B:83 73.0 0.456 H -63.0 -40.7 73.0 0.456 0.0 HOH
 2.851
 OD1
 O
2cxr 1 P06745 84.38 0.0 X-RAY
 2006-05-23 ASN A:83 A:83 73.0 0.456 H -65.1 -39.1 73.0 0.456 0.0 HOH
 2.879
 ND2
 O
ASN B:83 B:83 71.0 0.444 H -64.8 -39.4 71.0 0.444 0.0 HOH
 2.802
 OD1
 O
2cxs 1 P06745 84.38 0.0 X-RAY
 2006-05-23 ASN A:83 A:83 73.0 0.456 H -65.2 -40.1 73.0 0.456 0.0 HOH
 2.751
 OD1
 O
ASN B:83 B:83 73.0 0.456 H -61.9 -42.8 73.0 0.456 0.0 HOH
 2.884
 OD1
 O
2cxt 1 P06745 84.38 0.0 X-RAY
 2006-05-23 ASN A:83 A:83 73.0 0.456 H -62.3 -39.0 73.0 0.456 0.0 HOH
 2.772
 ND2
 O
ASN B:83 B:83 70.0 0.438 H -63.6 -38.4 70.0 0.438 0.0 HOH
 2.930
 ND2
 O
2cxu 1 P06745 84.38 0.0 X-RAY
 2006-05-23 ASN A:83 A:83 72.0 0.45 H -65.3 -39.0 72.0 0.45 0.0 HOH
 3.113
 ND2
 O
ASN B:83 B:83 72.0 0.45 H -63.7 -40.5 72.0 0.45 0.0 HOH
 2.822
 OD1
 O
1u0e 1 P06745 84.05 0.0 X-RAY
 2004-11-02 ASN A:83 A:82 72.0 0.45 H -61.0 -43.8 72.0 0.45 0.0 HOH
 2.756
 ND2
 O
ASN B:83 B:82 72.0 0.45 H -62.6 -42.0 72.0 0.45 0.0 HOH
 3.089
 ND2
 O
1u0f 1 P06745 84.05 0.0 X-RAY
 2004-11-02 ASN A:83 A:82 73.0 0.456 H -64.6 -40.6 73.0 0.456 0.0 HOH
 2.915
 ND2
 O
ASN B:83 B:82 73.0 0.456 H -64.7 -39.0 73.0 0.456 0.0 HOH
 2.916
 ND2
 O
1u0g 1 P06745 84.05 0.0 X-RAY
 2004-11-02 ASN A:83 A:82 73.0 0.456 H -63.6 -44.0 73.0 0.456 0.0 HOH
 2.831
 OD1
 O
ASN B:83 B:82 71.0 0.444 H -64.0 -40.1 71.0 0.444 0.0 BME
HOH
 3.580
2.724
 OD1
ND2
 O1
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p06744-f1 1 P06744 94.98 0.0 ARG A:83 A:83 85.0 0.378 H -57.0 -43.8