Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 34859515 . C A CCDS54246.1:NM_001184722.1:c.427Cgg>Agg_NP_001171651.1:p.143R>R Homo sapiens glucose-6-phosphate isomerase (GPI), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1iri 1 P06744 94.98 0.0 X-RAY
 2002-06-05 ARG A:104 A:104 0.0 0.0 T -122.6 17.9 0.0 0.0 0.0 HOH
 3.264
 CA
 O
ARG B:104 B:104 0.0 0.0 T -115.6 23.5 0.0 0.0 0.0 HOH
 5.446
 NH1
 O
ARG C:104 C:104 0.0 0.0 T -112.0 24.9 NA NA NA
ARG D:104 D:104 0.0 0.0 T -105.1 23.8 NA NA NA
1jiq 1 P06744 94.98 0.0 X-RAY
 2002-06-19 ARG A:104 A:104 0.0 0.0 T -116.0 22.3 0.0 0.0 0.0 HOH
 3.374
 CA
 O
ARG B:104 B:104 0.0 0.0 T -115.1 22.9 0.0 0.0 0.0 HOH
 3.399
 CA
 O
ARG C:104 C:104 0.0 0.0 T -107.9 21.8 NA NA NA
ARG D:104 D:104 0.0 0.0 T -115.1 23.3 NA NA NA
1nuh 1 P06744 94.98 0.0 X-RAY
 2003-02-11 ARG A:104 A:103 0.0 0.0 T -115.7 23.8 0.0 0.0 0.0 HOH
 3.758
 O
 O
1jlh 1 P06744 94.8 0.0 X-RAY
 2003-02-11 ARG A:104 A:103 0.0 0.0 T -114.7 21.6 0.0 0.0 0.0 HOH
 3.209
 CA
 O
ARG B:104 B:103 0.0 0.0 T -111.4 22.4 0.0 0.0 0.0 HOH
 3.506
 C
 O
ARG C:104 C:103 0.0 0.0 T -105.9 18.4 NA NA NA
ARG D:104 D:103 1.0 0.004 T -109.4 17.9 NA NA NA
1iat 1 P06744 94.97 0.0 X-RAY
 2001-05-30 ARG A:103 A:103 0.0 0.0 T -116.9 23.1 0.0 0.0 0.0 HOH
 3.384
 CA
 O
6xuh 1 P06744 94.96 0.0 X-RAY
 2020-07-29 ARG A:103 A:103 0.0 0.0 T -113.9 14.0 0.0 0.0 0.0 HOH
 6.453
 C
 O
ARG B:103 B:103 0.0 0.0 T -113.7 13.9 0.0 0.0 0.0 HOH
 3.983
 CG
 O
ARG C:103 C:103 0.0 0.0 T -113.9 13.3 NA NA NA
ARG D:103 D:103 0.0 0.0 T -113.0 12.8 NA NA NA
6xui 1 P06744 94.96 0.0 X-RAY
 2020-07-29 ARG A:103 A:103 0.0 0.0 T -113.4 23.1 0.0 0.0 0.0 HOH
 3.478
 CA
 O
ARG B:103 B:103 0.0 0.0 T -116.9 21.9 NA NA NA
ARG C:103 C:103 0.0 0.0 T -117.9 20.0 NA NA NA
ARG D:103 D:103 0.0 0.0 T -116.6 20.0 0.0 0.0 0.0 HOH
 3.318
 C
 O
1gzd 1 P08059 88.51 0.0 X-RAY
 2002-06-10 ARG A:103 A:103 1.0 0.004 T -121.6 21.6 1.0 0.004 0.0 HOH
 3.338
 CA
 O
1gzv 1 P08059 88.51 0.0 X-RAY
 2002-10-31 ARG A:103 A:103 0.0 0.0 T -112.8 25.6 0.0 0.0 0.0
1g98 1 Q9N1E2 87.81 0.0 X-RAY
 2001-06-01 ARG A:104 A:103 0.0 0.0 T -116.2 21.0 0.0 0.0 0.0 HOH
 3.431
 CA
 O
ARG B:104 B:103 1.0 0.004 T -114.3 24.8 1.0 0.004 0.0 HOH
 3.395
 CA
 O
1hm5 1 Q9N1E2 87.81 0.0 X-RAY
 2002-09-27 ARG A:104 A:103 0.0 0.0 T -114.6 21.6 0.0 0.0 0.0 HOH
 3.340
 CA
 O
ARG B:104 B:103 0.0 0.0 T -113.2 23.9 0.0 0.0 0.0 HOH
 3.382
 CA
 O
1hox 1 Q9N1E2 87.81 0.0 X-RAY
 2001-07-20 ARG A:104 A:103 0.0 0.0 T -112.9 18.6 0.0 0.0 0.0 HOH
 3.319
 CA
 O
ARG B:104 B:103 1.0 0.004 T -118.0 18.5 1.0 0.004 0.0 HOH
 3.243
 CA
 O
1xtb 1 Q9N1E2 87.81 0.0 X-RAY
 2005-03-22 ARG A:104 A:103 0.0 0.0 T -116.7 20.3 0.0 0.0 0.0 HOH
 3.386
 CA
 O
ARG B:104 B:1103 0.0 0.0 T -116.9 24.2 0.0 0.0 0.0 HOH
 3.342
 CA
 O
1n8t 1 Q9N1E2 87.97 0.0 X-RAY
 2003-03-04 ARG A:103 A:103 0.0 0.0 T -105.9 10.2 0.0 0.0 0.0 HOH
 3.559
 CG
 O
ARG B:103 B:103 0.0 0.0 T -110.7 18.7 0.0 0.0 0.0 HOH
 3.245
 C
 O
1dqr 1 Q9N1E2 87.79 0.0 X-RAY
 2000-02-09 ARG A:103 A:103 0.0 0.0 T -113.7 14.2 0.0 0.0 0.0 HOH
 5.652
 NH2
 O
ARG B:103 B:103 0.0 0.0 T -113.7 12.5 0.0 0.0 0.0 HOH
 3.437
 C
 O
1koj 1 Q9N1E2 87.79 0.0 X-RAY
 2002-05-03 ARG A:103 A:103 0.0 0.0 T -111.1 20.2 0.0 0.0 0.0 HOH
 3.497
 CA
 O
ARG B:103 B:103 0.0 0.0 T -112.2 21.7 0.0 0.0 0.0 HOH
 3.450
 CA
 O
2cvp 1 P06745 84.38 0.0 X-RAY
 2006-05-23 ARG A:104 A:104 0.0 0.0 T -112.6 19.9 0.0 0.0 0.0 HOH
 3.397
 CA
 O
ARG B:104 B:104 0.0 0.0 T -110.4 19.1 0.0 0.0 0.0 HOH
 3.409
 CA
 O
2cxn 1 P06745 84.38 0.0 X-RAY
 2006-05-23 ARG A:104 A:104 0.0 0.0 T -114.2 21.1 0.0 0.0 0.0 HOH
 3.399
 CA
 O
ARG B:104 B:104 0.0 0.0 T -113.0 20.8 0.0 0.0 0.0 HOH
 3.432
 CA
 O
2cxo 1 P06745 84.38 0.0 X-RAY
 2006-05-23 ARG A:104 A:104 0.0 0.0 T -114.0 22.4 0.0 0.0 0.0 HOH
 3.375
 CA
 O
ARG B:104 B:104 0.0 0.0 T -111.1 19.9 0.0 0.0 0.0 HOH
 3.404
 CA
 O
2cxp 1 P06745 84.38 0.0 X-RAY
 2006-05-23 ARG A:104 A:104 0.0 0.0 T -114.7 21.4 0.0 0.0 0.0 HOH
 3.344
 CA
 O
ARG B:104 B:104 0.0 0.0 T -114.2 19.2 0.0 0.0 0.0 HOH
 3.380
 CA
 O
2cxq 1 P06745 84.38 0.0 X-RAY
 2006-05-23 ARG A:104 A:104 0.0 0.0 T -114.6 21.2 0.0 0.0 0.0 HOH
 3.384
 CA
 O
ARG B:104 B:104 0.0 0.0 T -114.8 21.5 0.0 0.0 0.0 HOH
 3.376
 CA
 O
2cxr 1 P06745 84.38 0.0 X-RAY
 2006-05-23 ARG A:104 A:104 0.0 0.0 T -113.5 21.3 0.0 0.0 0.0 HOH
 3.326
 CA
 O
ARG B:104 B:104 0.0 0.0 T -115.2 22.5 0.0 0.0 0.0 HOH
 3.394
 CA
 O
2cxs 1 P06745 84.38 0.0 X-RAY
 2006-05-23 ARG A:104 A:104 0.0 0.0 T -115.0 20.8 0.0 0.0 0.0 HOH
 3.391
 CA
 O
ARG B:104 B:104 0.0 0.0 T -114.2 21.2 0.0 0.0 0.0 HOH
 3.402
 CA
 O
2cxt 1 P06745 84.38 0.0 X-RAY
 2006-05-23 ARG A:104 A:104 0.0 0.0 T -114.3 22.0 0.0 0.0 0.0 HOH
 3.370
 CA
 O
ARG B:104 B:104 0.0 0.0 T -113.9 21.2 0.0 0.0 0.0 HOH
 3.414
 CA
 O
2cxu 1 P06745 84.38 0.0 X-RAY
 2006-05-23 ARG A:104 A:104 0.0 0.0 T -113.1 20.2 0.0 0.0 0.0 HOH
 3.387
 CA
 O
ARG B:104 B:104 0.0 0.0 T -112.0 20.6 0.0 0.0 0.0 HOH
 3.374
 CA
 O
1u0e 1 P06745 84.05 0.0 X-RAY
 2004-11-02 ARG A:104 A:103 0.0 0.0 T -110.5 18.8 0.0 0.0 0.0 SO4
HOH
 7.241
3.360
 O
CA
 O1
O
ARG B:104 B:103 0.0 0.0 T -115.8 20.0 0.0 0.0 0.0 HOH
 3.433
 CA
 O
1u0f 1 P06745 84.05 0.0 X-RAY
 2004-11-02 ARG A:104 A:103 0.0 0.0 T -111.3 21.4 0.0 0.0 0.0 SO4
HOH
 7.329
3.416
 O
CA
 O1
O
ARG B:104 B:103 0.0 0.0 T -116.5 20.0 0.0 0.0 0.0 HOH
 3.417
 CA
 O
1u0g 1 P06745 84.05 0.0 X-RAY
 2004-11-02 ARG A:104 A:103 0.0 0.0 T -111.9 22.2 0.0 0.0 0.0 SO4
GOL
GOL
HOH
 7.081
8.076
7.151
3.370
 O
CA
C
CA
 O1
O3
O1
O
ARG B:104 B:103 0.0 0.0 T -113.6 22.0 0.0 0.0 0.0 HOH
 3.444
 CA
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p06744-f1 1 P06744 94.98 0.0 ARG A:104 A:104 0.0 0.0 T -119.7 16.4