Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 34859597 . C A CCDS54246.1:NM_001184722.1:c.509tCt>tAt_NP_001171651.1:p.170S>Y Homo sapiens glucose-6-phosphate isomerase (GPI), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1iri 1 P06744 94.98 0.0 X-RAY
 2002-06-05 SER A:131 A:131 66.0 0.574 H -58.6 -48.5 66.0 0.574 0.0 HOH
 6.603
 O
 O
SER B:131 B:131 62.0 0.539 H -58.5 -44.8 62.0 0.539 0.0 HOH
 6.045
 CB
 O
SER C:131 C:131 62.0 0.539 H -66.2 -49.1 NA NA NA
SER D:131 D:131 65.0 0.565 H -62.6 -44.6 NA NA NA
1jiq 1 P06744 94.98 0.0 X-RAY
 2002-06-19 SER A:131 A:131 64.0 0.557 H -62.3 -48.0 64.0 0.557 0.0 HOH
 4.765
 N
 O
SER B:131 B:131 65.0 0.565 H -59.6 -48.1 65.0 0.565 0.0 HOH
 2.785
 OG
 O
SER C:131 C:131 64.0 0.557 H -58.7 -51.6 NA NA NA
SER D:131 D:131 63.0 0.548 H -65.0 -44.6 NA NA NA
1nuh 1 P06744 94.98 0.0 X-RAY
 2003-02-11 SER A:131 A:130 67.0 0.583 H -62.2 -44.9 67.0 0.583 0.0 SO4
HOH
 8.168
3.324
 O
OG
 O4
O
1jlh 1 P06744 94.8 0.0 X-RAY
 2003-02-11 SER A:131 A:130 48.0 0.417 H -61.5 -46.6 48.0 0.417 0.0 HOH
 3.407
 OG
 O
SER B:131 B:130 47.0 0.409 H -58.3 -45.9 47.0 0.409 0.0 HOH
 3.544
 OG
 O
SER C:131 C:130 52.0 0.452 H -61.0 -44.0 NA NA NA
SER D:131 D:130 51.0 0.443 H -61.6 -46.9 NA NA NA
1iat 1 P06744 94.97 0.0 X-RAY
 2001-05-30 SER A:130 A:130 58.0 0.504 H -61.5 -45.8 58.0 0.504 0.0 HOH
 2.975
 OG
 O
6xuh 1 P06744 94.96 0.0 X-RAY
 2020-07-29 SER A:130 A:130 63.0 0.548 H -61.6 -49.7 63.0 0.548 0.0 HOH
 7.324
 O
 O
SER B:130 B:130 64.0 0.557 H -61.5 -50.0 64.0 0.557 0.0 HOH
 4.300
 CB
 O
SER C:130 C:130 64.0 0.557 H -62.0 -49.7 NA NA NA
SER D:130 D:130 64.0 0.557 H -61.9 -49.6 NA NA NA
6xui 1 P06744 94.96 0.0 X-RAY
 2020-07-29 SER A:130 A:130 60.0 0.522 H -62.5 -42.6 60.0 0.522 0.0 HOH
 2.727
 OG
 O
SER B:130 B:130 61.0 0.53 H -65.8 -44.7 NA NA NA
SER C:130 C:130 63.0 0.548 H -60.6 -47.8 NA NA NA
SER D:130 D:130 68.0 0.591 H -63.4 -50.5 68.0 0.591 0.0 HOH
 3.500
 CB
 O
1gzd 1 P08059 88.51 0.0 X-RAY
 2002-06-10 SER A:130 A:130 51.0 0.443 H -70.9 -38.6 51.0 0.443 0.0 HOH
 9.252
 O
 O
1gzv 1 P08059 88.51 0.0 X-RAY
 2002-10-31 SER A:130 A:130 52.0 0.452 H -72.2 -38.6 52.0 0.452 0.0
1g98 1 Q9N1E2 87.81 0.0 X-RAY
 2001-06-01 ALA A:131 A:130 58.0 0.504 H -58.5 -49.5 58.0 0.504 0.0 HOH
 2.762
 O
 O
ALA B:131 B:130 60.0 0.522 H -59.7 -45.3 60.0 0.522 0.0 HOH
 2.704
 O
 O
1hm5 1 Q9N1E2 87.81 0.0 X-RAY
 2002-09-27 ALA A:131 A:130 48.0 0.417 H -55.2 -49.6 48.0 0.417 0.0 HOH
 2.761
 O
 O
ALA B:131 B:130 57.0 0.496 H -57.1 -50.0 57.0 0.496 0.0 HOH
 2.846
 O
 O
1hox 1 Q9N1E2 87.81 0.0 X-RAY
 2001-07-20 ALA A:131 A:130 57.0 0.496 H -63.5 -43.9 57.0 0.496 0.0 HOH
 2.881
 O
 O
ALA B:131 B:130 46.0 0.4 H -55.5 -47.7 46.0 0.4 0.0 HOH
 3.711
 N
 O
1xtb 1 Q9N1E2 87.81 0.0 X-RAY
 2005-03-22 ALA A:131 A:130 59.0 0.513 H -57.4 -38.5 59.0 0.513 0.0 HOH
 2.968
 O
 O
ALA B:131 B:1130 44.0 0.383 H -55.2 -48.8 44.0 0.383 0.0 HOH
 3.831
 CB
 O
1n8t 1 Q9N1E2 87.97 0.0 X-RAY
 2003-03-04 ALA A:130 A:130 43.0 0.374 H -61.7 -45.7 43.0 0.374 0.0 HOH
 3.629
 CB
 O
ALA B:130 B:130 58.0 0.504 H -52.3 -44.1 58.0 0.504 0.0 HOH
 3.704
 C
 O
1dqr 1 Q9N1E2 87.79 0.0 X-RAY
 2000-02-09 ALA A:130 A:130 59.0 0.513 H -61.7 -46.5 59.0 0.513 0.0 HOH
 5.810
 C
 O
ALA B:130 B:130 56.0 0.487 H -60.7 -46.6 56.0 0.487 0.0 HOH
 3.373
 CB
 O
1koj 1 Q9N1E2 87.79 0.0 X-RAY
 2002-05-03 ALA A:130 A:130 58.0 0.504 H -52.8 -46.8 58.0 0.504 0.0 HOH
 3.415
 N
 O
ALA B:130 B:130 57.0 0.496 H -67.8 -38.0 57.0 0.496 0.0 HOH
 2.675
 O
 O
2cvp 1 P06745 84.38 0.0 X-RAY
 2006-05-23 SER A:131 A:131 64.0 0.557 H -62.9 -46.5 64.0 0.557 0.0 GOL
HOH
 9.796
3.035
 O
O
 C1
O
SER B:131 B:131 75.0 0.652 H -61.6 -49.2 75.0 0.652 0.0 HOH
 3.097
 O
 O
2cxn 1 P06745 84.38 0.0 X-RAY
 2006-05-23 SER A:131 A:131 67.0 0.583 H -61.9 -45.9 67.0 0.583 0.0 GOL
HOH
 9.984
2.961
 O
OG
 C1
O
SER B:131 B:131 73.0 0.635 H -62.2 -45.0 73.0 0.635 0.0 HOH
 3.069
 O
 O
2cxo 1 P06745 84.38 0.0 X-RAY
 2006-05-23 SER A:131 A:131 64.0 0.557 H -63.6 -47.0 64.0 0.557 0.0 GOL
HOH
 9.965
3.107
 O
O
 C1
O
SER B:131 B:131 74.0 0.643 H -59.0 -49.2 74.0 0.643 0.0 HOH
 3.191
 OG
 O
2cxp 1 P06745 84.38 0.0 X-RAY
 2006-05-23 SER A:131 A:131 64.0 0.557 H -61.3 -46.1 64.0 0.557 0.0 GOL
HOH
 9.967
2.889
 O
O
 C1
O
SER B:131 B:131 73.0 0.635 H -61.3 -47.6 73.0 0.635 0.0 HOH
 3.091
 OG
 O
2cxq 1 P06745 84.38 0.0 X-RAY
 2006-05-23 SER A:131 A:131 66.0 0.574 H -61.7 -46.5 66.0 0.574 0.0 GOL
HOH
 9.954
2.867
 O
OG
 C1
O
SER B:131 B:131 74.0 0.643 H -62.1 -44.6 74.0 0.643 0.0 HOH
 3.126
 O
 O
2cxr 1 P06745 84.38 0.0 X-RAY
 2006-05-23 SER A:131 A:131 66.0 0.574 H -61.2 -47.2 66.0 0.574 0.0 GOL
HOH
 9.920
3.032
 O
O
 C1
O
SER B:131 B:131 74.0 0.643 H -60.1 -47.5 74.0 0.643 0.0 HOH
 3.186
 O
 O
2cxs 1 P06745 84.38 0.0 X-RAY
 2006-05-23 SER A:131 A:131 65.0 0.565 H -61.1 -45.4 65.0 0.565 0.0 GOL
HOH
 9.915
2.929
 O
O
 C1
O
SER B:131 B:131 73.0 0.635 H -63.1 -44.3 73.0 0.635 0.0 HOH
 3.060
 O
 O
2cxt 1 P06745 84.38 0.0 X-RAY
 2006-05-23 SER A:131 A:131 66.0 0.574 H -58.8 -47.8 66.0 0.574 0.0 GOL
HOH
 9.896
2.937
 O
O
 C1
O
SER B:131 B:131 73.0 0.635 H -64.9 -42.4 73.0 0.635 0.0 HOH
 3.032
 OG
 O
2cxu 1 P06745 84.38 0.0 X-RAY
 2006-05-23 SER A:131 A:131 65.0 0.565 H -60.7 -46.4 65.0 0.565 0.0 GOL
HOH
 9.986
2.846
 O
OG
 C1
O
SER B:131 B:131 76.0 0.661 H -62.3 -43.9 76.0 0.661 0.0 HOH
 3.119
 O
 O
1u0e 1 P06745 84.05 0.0 X-RAY
 2004-11-02 SER A:131 A:130 72.0 0.626 H -60.3 -47.1 72.0 0.626 0.0 GOL
HOH
 6.377
3.367
 C
OG
 C3
O
SER B:131 B:130 70.0 0.609 H -62.2 -44.2 70.0 0.609 0.0 SO4
HOH
 8.930
3.151
 O
O
 O4
O
1u0f 1 P06745 84.05 0.0 X-RAY
 2004-11-02 SER A:131 A:130 68.0 0.591 H -63.6 -44.0 68.0 0.591 0.0 GOL
GOL
HOH
 7.614
6.559
3.282
 O
OG
OG
 O3
O3
O
SER B:131 B:130 73.0 0.635 H -61.0 -47.0 73.0 0.635 0.0 SO4
HOH
 8.875
4.996
 O
N
 O4
O
1u0g 1 P06745 84.05 0.0 X-RAY
 2004-11-02 SER A:131 A:130 73.0 0.635 H -58.8 -48.7 73.0 0.635 0.0 GOL
GOL
GOL
HOH
 9.980
8.911
6.504
3.748
 O
N
C
CB
 C1
C3
C3
O
SER B:131 B:130 63.0 0.548 H -64.7 -43.1 63.0 0.548 0.0 SO4
HOH
 9.004
2.762
 O
OG
 O4
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p06744-f1 1 P06744 94.98 0.0 SER A:131 A:131 64.0 0.557 H -59.5 -44.8