Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr19 | 34868644 | . | C | A | CCDS54246.1:NM_001184722.1:c.524cCc>cAc_NP_001171651.1:p.175P>H | Homo sapiens glucose-6-phosphate isomerase (GPI), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
1iri | 1 | P06744 | 94.98 | 0.0 |
X-RAY |
2002-06-05 | PRO | A:164 | A:164 | 0.0 | 0.0 | H | -53.4 | -37.8 | 0.0 | 0.0 | 0.0 |
E4P HOH |
9.515 4.001 |
CD CB |
O2 O |
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PRO | B:164 | B:164 | 0.0 | 0.0 | H | -59.7 | -35.3 | 0.0 | 0.0 | 0.0 |
E4P HOH |
9.544 3.631 |
CD CD |
O2 O |
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PRO | C:164 | C:164 | 0.0 | 0.0 | H | -55.4 | -37.1 | NA | NA | NA | |||||||||||||
PRO | D:164 | D:164 | 0.0 | 0.0 | H | -59.7 | -35.2 | NA | NA | NA | |||||||||||||
1jiq | 1 | P06744 | 94.98 | 0.0 |
X-RAY |
2002-06-19 | PRO | A:164 | A:164 | 0.0 | 0.0 | H | -53.7 | -40.3 | 0.0 | 0.0 | 0.0 |
HOH |
3.856 |
CD |
O |
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PRO | B:164 | B:164 | 0.0 | 0.0 | H | -52.1 | -42.4 | 0.0 | 0.0 | 0.0 |
HOH |
3.996 |
CD |
O |
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PRO | C:164 | C:164 | 0.0 | 0.0 | H | -53.1 | -40.7 | NA | NA | NA | |||||||||||||
PRO | D:164 | D:164 | 0.0 | 0.0 | H | -54.6 | -42.7 | NA | NA | NA | |||||||||||||
1nuh | 1 | P06744 | 94.98 | 0.0 |
X-RAY |
2003-02-11 | PRO | A:164 | A:163 | 0.0 | 0.0 | H | -48.6 | -42.6 | 0.0 | 0.0 | 0.0 |
PA5 HOH |
9.575 3.852 |
CD CD |
O3 O |
||
1jlh | 1 | P06744 | 94.8 | 0.0 |
X-RAY |
2003-02-11 | PRO | A:164 | A:163 | 0.0 | 0.0 | H | -54.4 | -41.2 | 0.0 | 0.0 | 0.0 |
HOH |
3.983 |
CD |
O |
||
PRO | B:164 | B:163 | 0.0 | 0.0 | H | -53.8 | -41.7 | 0.0 | 0.0 | 0.0 |
HOH |
4.066 |
CD |
O |
|||||||||
PRO | C:164 | C:163 | 0.0 | 0.0 | H | -53.7 | -38.7 | NA | NA | NA | |||||||||||||
PRO | D:164 | D:163 | 0.0 | 0.0 | H | -54.6 | -40.7 | NA | NA | NA | |||||||||||||
1iat | 1 | P06744 | 94.97 | 0.0 |
X-RAY |
2001-05-30 | PRO | A:163 | A:163 | 0.0 | 0.0 | H | -57.0 | -39.5 | 0.0 | 0.0 | 0.0 |
SO4 BME HOH |
9.995 9.913 3.918 |
CD CD CD |
O3 O1 O |
||
6xuh | 1 | P06744 | 94.96 | 0.0 |
X-RAY |
2020-07-29 | PRO | A:163 | A:163 | 0.0 | 0.0 | H | -64.6 | -32.4 | 0.0 | 0.0 | 0.0 |
PA5 HOH |
9.292 5.436 |
CD CD |
O3 O |
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PRO | B:163 | B:163 | 0.0 | 0.0 | H | -63.9 | -32.8 | 0.0 | 0.0 | 0.0 |
O1B HOH |
9.338 4.163 |
CD CD |
O2 O |
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PRO | C:163 | C:163 | 0.0 | 0.0 | H | -64.3 | -32.1 | NA | NA | NA | |||||||||||||
PRO | D:163 | D:163 | 0.0 | 0.0 | H | -64.7 | -32.0 | NA | NA | NA | |||||||||||||
6xui | 1 | P06744 | 94.96 | 0.0 |
X-RAY |
2020-07-29 | PRO | A:163 | A:163 | 0.0 | 0.0 | H | -56.3 | -36.8 | 0.0 | 0.0 | 0.0 |
PA5 HOH |
9.531 3.975 |
CD CD |
O3 O |
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PRO | B:163 | B:163 | 0.0 | 0.0 | H | -57.4 | -37.6 | NA | NA | NA | |||||||||||||
PRO | C:163 | C:163 | 0.0 | 0.0 | H | -57.9 | -38.3 | NA | NA | NA | |||||||||||||
PRO | D:163 | D:163 | 0.0 | 0.0 | H | -57.7 | -39.6 | 0.0 | 0.0 | 0.0 |
PA5 HOH |
9.238 3.966 |
CD CD |
O3 O |
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1gzd | 1 | P08059 | 88.51 | 0.0 |
X-RAY |
2002-06-10 | PRO | A:163 | A:163 | 0.0 | 0.0 | H | -43.5 | -55.7 | 0.0 | 0.0 | 0.0 |
SO4 HOH |
9.911 4.175 |
CG CG |
O3 O |
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1gzv | 1 | P08059 | 88.51 | 0.0 |
X-RAY |
2002-10-31 | PRO | A:163 | A:163 | 0.0 | 0.0 | H | -49.3 | -47.4 | 0.0 | 0.0 | 0.0 |
PA5 |
9.552 |
CD |
O3 |
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1g98 | 1 | Q9N1E2 | 87.81 | 0.0 |
X-RAY |
2001-06-01 | PRO | A:164 | A:163 | 0.0 | 0.0 | H | -59.6 | -35.7 | 0.0 | 0.0 | 0.0 |
PA5 HOH |
9.415 3.971 |
CD CD |
O3 O |
||
PRO | B:164 | B:163 | 0.0 | 0.0 | H | -55.5 | -42.1 | 0.0 | 0.0 | 0.0 |
PA5 HOH |
9.391 3.911 |
CD CD |
O3 O |
|||||||||
1hm5 | 1 | Q9N1E2 | 87.81 | 0.0 |
X-RAY |
2002-09-27 | PRO | A:164 | A:163 | 0.0 | 0.0 | H | -56.1 | -41.1 | 0.0 | 0.0 | 0.0 |
HOH |
4.083 |
CD |
O |
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PRO | B:164 | B:163 | 0.0 | 0.0 | H | -57.0 | -40.4 | 0.0 | 0.0 | 0.0 |
HOH |
4.016 |
CD |
O |
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1hox | 1 | Q9N1E2 | 87.81 | 0.0 |
X-RAY |
2001-07-20 | PRO | A:164 | A:163 | 0.0 | 0.0 | H | -55.0 | -50.1 | 0.0 | 0.0 | 0.0 |
F6P HOH |
9.254 3.956 |
CD CD |
O4 O |
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PRO | B:164 | B:163 | 0.0 | 0.0 | H | -56.6 | -37.6 | 0.0 | 0.0 | 0.0 |
F6P HOH |
9.167 3.909 |
CD CD |
O4 O |
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1xtb | 1 | Q9N1E2 | 87.81 | 0.0 |
X-RAY |
2005-03-22 | PRO | A:164 | A:163 | 0.0 | 0.0 | H | -58.7 | -42.1 | 0.0 | 0.0 | 0.0 |
S6P HOH |
9.943 3.985 |
CD CD |
O4 O |
||
PRO | B:164 | B:1163 | 0.0 | 0.0 | H | -56.7 | -33.9 | 0.0 | 0.0 | 0.0 |
HOH |
3.988 |
CD |
O |
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1n8t | 1 | Q9N1E2 | 87.97 | 0.0 |
X-RAY |
2003-03-04 | PRO | A:163 | A:163 | 0.0 | 0.0 | H | -58.9 | -41.0 | 0.0 | 0.0 | 0.0 |
HOH |
4.285 |
CB |
O |
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PRO | B:163 | B:163 | 0.0 | 0.0 | H | -52.3 | -39.8 | 0.0 | 0.0 | 0.0 |
HOH |
3.874 |
CG |
O |
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1dqr | 1 | Q9N1E2 | 87.79 | 0.0 |
X-RAY |
2000-02-09 | PRO | A:163 | A:163 | 0.0 | 0.0 | H | -56.3 | -42.4 | 0.0 | 0.0 | 0.0 |
6PG HOH |
9.795 6.719 |
CD CB |
O4 O |
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PRO | B:163 | B:163 | 0.0 | 0.0 | H | -56.4 | -41.0 | 0.0 | 0.0 | 0.0 |
6PG HOH |
9.369 4.061 |
CD CG |
O4 O |
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1koj | 1 | Q9N1E2 | 87.79 | 0.0 |
X-RAY |
2002-05-03 | PRO | A:163 | A:163 | 0.0 | 0.0 | H | -59.9 | -34.0 | 0.0 | 0.0 | 0.0 |
PAN HOH |
9.390 4.134 |
CD CD |
O3 O |
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PRO | B:163 | B:163 | 0.0 | 0.0 | H | -61.2 | -33.3 | 0.0 | 0.0 | 0.0 |
PAN HOH |
9.465 3.996 |
CD CD |
O3 O |
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2cvp | 1 | P06745 | 84.38 | 0.0 |
X-RAY |
2006-05-23 | PRO | A:164 | A:164 | 0.0 | 0.0 | H | -58.5 | -39.6 | 0.0 | 0.0 | 0.0 |
HOH |
3.953 |
CD |
O |
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PRO | B:164 | B:164 | 0.0 | 0.0 | H | -55.3 | -42.3 | 0.0 | 0.0 | 0.0 |
HOH |
4.066 |
CD |
O |
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2cxn | 1 | P06745 | 84.38 | 0.0 |
X-RAY |
2006-05-23 | PRO | A:164 | A:164 | 0.0 | 0.0 | H | -55.3 | -40.2 | 0.0 | 0.0 | 0.0 |
HOH |
4.034 |
CD |
O |
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PRO | B:164 | B:164 | 0.0 | 0.0 | H | -54.3 | -40.8 | 0.0 | 0.0 | 0.0 |
HOH |
4.034 |
CD |
O |
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2cxo | 1 | P06745 | 84.38 | 0.0 |
X-RAY |
2006-05-23 | PRO | A:164 | A:164 | 0.0 | 0.0 | H | -53.4 | -41.3 | 0.0 | 0.0 | 0.0 |
DER HOH |
9.386 3.974 |
CD CD |
O2 O |
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PRO | B:164 | B:164 | 0.0 | 0.0 | H | -52.3 | -43.0 | 0.0 | 0.0 | 0.0 |
DER HOH |
9.456 3.969 |
CD CD |
O2 O |
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2cxp | 1 | P06745 | 84.38 | 0.0 |
X-RAY |
2006-05-23 | PRO | A:164 | A:164 | 0.0 | 0.0 | H | -52.0 | -43.0 | 0.0 | 0.0 | 0.0 |
A5P HOH |
9.307 3.936 |
CD CD |
O3 O |
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PRO | B:164 | B:164 | 0.0 | 0.0 | H | -52.5 | -45.3 | 0.0 | 0.0 | 0.0 |
A5P HOH |
9.478 3.931 |
CD CD |
O3 O |
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2cxq | 1 | P06745 | 84.38 | 0.0 |
X-RAY |
2006-05-23 | PRO | A:164 | A:164 | 0.0 | 0.0 | H | -58.0 | -37.1 | 0.0 | 0.0 | 0.0 |
S6P HOH |
9.405 3.983 |
CD CD |
O4 O |
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PRO | B:164 | B:164 | 0.0 | 0.0 | H | -55.2 | -39.8 | 0.0 | 0.0 | 0.0 |
S6P HOH |
9.435 4.004 |
CD CD |
O4 O |
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2cxr | 1 | P06745 | 84.38 | 0.0 |
X-RAY |
2006-05-23 | PRO | A:164 | A:164 | 0.0 | 0.0 | H | -55.9 | -39.1 | 0.0 | 0.0 | 0.0 |
6PG HOH |
9.432 3.931 |
CD CD |
O4 O |
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PRO | B:164 | B:164 | 0.0 | 0.0 | H | -54.0 | -40.2 | 0.0 | 0.0 | 0.0 |
6PG HOH |
9.524 3.948 |
CD CD |
O4 O |
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2cxs | 1 | P06745 | 84.38 | 0.0 |
X-RAY |
2006-05-23 | PRO | A:164 | A:164 | 0.0 | 0.0 | H | -54.5 | -40.7 | 0.0 | 0.0 | 0.0 |
F6P HOH |
9.410 4.003 |
CD CD |
O4 O |
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PRO | B:164 | B:164 | 0.0 | 0.0 | H | -54.5 | -40.1 | 0.0 | 0.0 | 0.0 |
F6P HOH |
9.474 3.979 |
CD CD |
O4 O |
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2cxt | 1 | P06745 | 84.38 | 0.0 |
X-RAY |
2006-05-23 | PRO | A:164 | A:164 | 0.0 | 0.0 | H | -53.9 | -41.6 | 0.0 | 0.0 | 0.0 |
F6P HOH |
9.419 4.028 |
CD CD |
O4 O |
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PRO | B:164 | B:164 | 0.0 | 0.0 | H | -56.5 | -41.6 | 0.0 | 0.0 | 0.0 |
F6P HOH |
9.414 3.951 |
CD CD |
O4 O |
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2cxu | 1 | P06745 | 84.38 | 0.0 |
X-RAY |
2006-05-23 | PRO | A:164 | A:164 | 0.0 | 0.0 | H | -51.6 | -43.5 | 0.0 | 0.0 | 0.0 |
PO4 HOH |
9.995 3.997 |
CD CD |
O2 O |
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PRO | B:164 | B:164 | 0.0 | 0.0 | H | -53.5 | -41.7 | 0.0 | 0.0 | 0.0 |
HOH |
4.022 |
CD |
O |
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1u0e | 1 | P06745 | 84.05 | 0.0 |
X-RAY |
2004-11-02 | PRO | A:164 | A:163 | 0.0 | 0.0 | H | -54.5 | -43.2 | 0.0 | 0.0 | 0.0 |
SO4 BME GOL GOL HOH |
9.962 9.493 7.314 9.136 4.006 |
CD C O O CD |
O3 O1 O1 O3 O |
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PRO | B:164 | B:163 | 0.0 | 0.0 | H | -53.5 | -42.8 | 0.0 | 0.0 | 0.0 |
SO4 HOH |
9.178 3.990 |
CD CD |
O1 O |
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1u0f | 1 | P06745 | 84.05 | 0.0 |
X-RAY |
2004-11-02 | PRO | A:164 | A:163 | 0.0 | 0.0 | H | -56.6 | -40.7 | 0.0 | 0.0 | 0.0 |
G6P G6Q GOL GOL HOH |
9.448 9.711 7.924 9.003 3.999 |
CD CD O O CD |
O4 O4 C3 O3 O |
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PRO | B:164 | B:163 | 0.0 | 0.0 | H | -54.3 | -40.2 | 0.0 | 0.0 | 0.0 |
SO4 SO4 HOH |
9.948 9.341 3.989 |
CD CD CD |
O3 O1 O |
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1u0g | 1 | P06745 | 84.05 | 0.0 |
X-RAY |
2004-11-02 | PRO | A:164 | A:163 | 0.0 | 0.0 | H | -52.6 | -41.2 | 0.0 | 0.0 | 0.0 |
E4P BME HOH |
9.485 9.807 4.054 |
CD C CD |
O2 C1 O |
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PRO | B:164 | B:163 | 0.0 | 0.0 | H | -53.5 | -41.4 | 0.0 | 0.0 | 0.0 |
E4P HOH |
9.624 3.991 |
CD CD |
O2 O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p06744-f1 | 1 | P06744 | 94.98 | 0.0 | PRO | A:164 | A:164 | 0.0 | 0.0 | H | -51.6 | -45.9 |