Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 34869886 . G A CCDS54246.1:NM_001184722.1:c.714gaG>gaA_NP_001171651.1:p.238E>E Homo sapiens glucose-6-phosphate isomerase (GPI), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1iri 1 P06744 94.98 0.0 X-RAY
2002-06-05 GLU A:227 A:227 127.0 0.668 H -63.6 -41.0 95.0 0.5 0.168 B:P06744:0.168
HOH
2.603
OE1
O
GLU B:227 B:227 125.0 0.658 H -54.4 -48.8 97.0 0.511 0.147 A:P06744:0.147
GLU C:227 C:227 139.0 0.732 H -69.6 -38.6 NA NA NA
GLU D:227 D:227 122.0 0.642 H -60.4 -37.6 NA NA NA
1jiq 1 P06744 94.98 0.0 X-RAY
2002-06-19 GLU A:227 A:227 143.0 0.753 H -64.3 -42.9 112.0 0.589 0.164 B:P06744:0.163
HOH
2.530
OE1
O
GLU B:227 B:227 143.0 0.753 H -63.1 -44.4 112.0 0.589 0.164 A:P06744:0.163
HOH
2.791
O
O
GLU C:227 C:227 121.0 0.637 H -61.3 -48.3 NA NA NA
GLU D:227 D:227 129.0 0.679 H -58.2 -46.8 NA NA NA
1nuh 1 P06744 94.98 0.0 X-RAY
2003-02-11 GLU A:227 A:226 122.0 0.642 H -61.9 -44.7 94.0 0.495 0.147 A:P06744:0.147
HOH
5.478
O
O
1jlh 1 P06744 94.8 0.0 X-RAY
2003-02-11 GLU A:227 A:226 141.0 0.742 H -60.7 -42.3 111.0 0.584 0.158 B:P06744:0.158
HOH
2.685
O
O
GLU B:227 B:226 143.0 0.753 H -61.4 -44.2 106.0 0.558 0.195 A:P06744:0.195
HOH
3.511
CB
O
GLU C:227 C:226 144.0 0.758 H -58.2 -47.5 NA NA NA
GLU D:227 D:226 137.0 0.721 H -66.3 -47.0 NA NA NA
1iat 1 P06744 94.97 0.0 X-RAY
2001-05-30 GLU A:226 A:226 122.0 0.642 H -63.7 -44.6 93.0 0.489 0.153 A:P06744:0.153
HOH
2.546
OE1
O
6xuh 1 P06744 94.96 0.0 X-RAY
2020-07-29 GLU A:226 A:226 130.0 0.684 H -66.2 -41.4 102.0 0.537 0.147 B:P06744:0.147
HOH
2.699
OE1
O
GLU B:226 B:226 130.0 0.684 H -66.4 -41.2 98.0 0.516 0.168 A:P06744:0.168
HOH
2.998
OE2
O
GLU C:226 C:226 132.0 0.695 H -66.9 -40.7 NA NA NA
GLU D:226 D:226 135.0 0.711 H -66.7 -41.0 NA NA NA
6xui 1 P06744 94.96 0.0 X-RAY
2020-07-29 GLU A:226 A:226 153.0 0.805 H -61.1 -47.7 117.0 0.616 0.189 D:P06744:0.189
HOH
2.726
OE1
O
GLU B:226 B:226 146.0 0.768 H -64.3 -45.8 NA NA NA
GLU C:226 C:226 123.0 0.647 H -61.6 -47.1 NA NA NA
GLU D:226 D:226 128.0 0.674 H -60.7 -48.3 101.0 0.532 0.142 A:P06744:0.142
HOH
2.478
OE1
O
1gzd 1 P08059 88.51 0.0 X-RAY
2002-06-10 GLU A:226 A:226 137.0 0.721 H -62.8 -47.7 112.0 0.589 0.132 A:P08059:0.132
HOH
3.589
CB
O
1gzv 1 P08059 88.51 0.0 X-RAY
2002-10-31 GLU A:226 A:226 138.0 0.726 H -61.9 -46.5 117.0 0.616 0.11 A:P08059:0.111
1g98 1 Q9N1E2 87.81 0.0 X-RAY
2001-06-01 ASP A:227 A:226 105.0 0.7 H -62.2 -40.9 89.0 0.593 0.107 B:Q9N1E2:0.107
HOH
3.542
CB
O
ASP B:227 B:226 109.0 0.727 H -59.2 -45.8 87.0 0.58 0.147 A:Q9N1E2:0.147
HOH
2.345
OD1
O
1hm5 1 Q9N1E2 87.81 0.0 X-RAY
2002-09-27 ASP A:227 A:226 103.0 0.687 H -62.9 -44.6 78.0 0.52 0.167 B:Q9N1E2:0.167
HOH
3.729
CB
O
ASP B:227 B:226 104.0 0.693 H -62.3 -42.4 78.0 0.52 0.173 A:Q9N1E2:0.173
HOH
2.681
O
O
1hox 1 Q9N1E2 87.81 0.0 X-RAY
2001-07-20 ASP A:227 A:226 105.0 0.7 H -63.2 -50.5 80.0 0.533 0.167 B:Q9N1E2:0.167
HOH
2.844
O
O
ASP B:227 B:226 104.0 0.693 H -57.8 -51.9 81.0 0.54 0.153 A:Q9N1E2:0.153
HOH
2.700
OD2
O
1xtb 1 Q9N1E2 87.81 0.0 X-RAY
2005-03-22 ASP A:227 A:226 90.0 0.6 H -62.8 -46.4 64.0 0.427 0.173 B:Q9N1E2:0.173
HOH
5.653
CB
O
ASP B:227 B:1226 98.0 0.653 H -62.3 -47.5 78.0 0.52 0.133 A:Q9N1E2:0.133
HOH
2.661
OD1
O
1n8t 1 Q9N1E2 87.97 0.0 X-RAY
2003-03-04 ASP A:226 A:226 104.0 0.693 H -54.3 -39.9 85.0 0.567 0.126 B:Q9N1E2:0.127
HOH
3.736
CB
O
ASP B:226 B:226 99.0 0.66 H -67.8 -36.3 76.0 0.507 0.153 A:Q9N1E2:0.153
HOH
3.112
OD2
O
1dqr 1 Q9N1E2 87.79 0.0 X-RAY
2000-02-09 ASP A:226 A:226 99.0 0.66 H -66.9 -33.7 75.0 0.5 0.16 B:Q9N1E2:0.16
HOH
6.349
C
O
ASP B:226 B:226 100.0 0.667 H -66.1 -35.3 79.0 0.527 0.14 A:Q9N1E2:0.14
HOH
5.171
OD2
O
1koj 1 Q9N1E2 87.79 0.0 X-RAY
2002-05-03 ASP A:226 A:226 95.0 0.633 H -61.0 -53.3 65.0 0.433 0.2 B:Q9N1E2:0.2
HOH
3.405
CG
O
ASP B:226 B:226 85.0 0.567 H -60.4 -44.9 66.0 0.44 0.127 A:Q9N1E2:0.127
HOH
2.736
OD2
O
2cvp 1 P06745 84.38 0.0 X-RAY
2006-05-23 GLU A:227 A:227 121.0 0.637 H -64.0 -45.2 90.0 0.474 0.163 B:P06745:0.163
HOH
2.541
OE1
O
GLU B:227 B:227 123.0 0.647 H -56.8 -50.0 89.0 0.468 0.179 A:P06745:0.179
HOH
2.633
OE1
O
2cxn 1 P06745 84.38 0.0 X-RAY
2006-05-23 GLU A:227 A:227 122.0 0.642 H -64.8 -44.6 89.0 0.468 0.174 B:P06745:0.174
HOH
2.735
OE2
O
GLU B:227 B:227 127.0 0.668 H -61.2 -46.0 93.0 0.489 0.179 A:P06745:0.179
HOH
2.692
OE1
O
2cxo 1 P06745 84.38 0.0 X-RAY
2006-05-23 GLU A:227 A:227 121.0 0.637 H -61.2 -45.9 90.0 0.474 0.163 B:P06745:0.163
HOH
2.742
OE1
O
GLU B:227 B:227 129.0 0.679 H -61.0 -44.0 97.0 0.511 0.168 A:P06745:0.168
HOH
2.678
OE2
O
2cxp 1 P06745 84.38 0.0 X-RAY
2006-05-23 GLU A:227 A:227 119.0 0.626 H -63.5 -46.0 84.0 0.442 0.184 B:P06745:0.184
HOH
2.676
OE1
O
GLU B:227 B:227 128.0 0.674 H -62.7 -44.7 96.0 0.505 0.169 A:P06745:0.168
HOH
2.690
OE1
O
2cxq 1 P06745 84.38 0.0 X-RAY
2006-05-23 GLU A:227 A:227 122.0 0.642 H -61.8 -46.1 91.0 0.479 0.163 B:P06745:0.163
HOH
2.705
OE1
O
GLU B:227 B:227 124.0 0.653 H -62.0 -45.8 93.0 0.489 0.164 A:P06745:0.163
HOH
2.677
OE1
O
2cxr 1 P06745 84.38 0.0 X-RAY
2006-05-23 GLU A:227 A:227 120.0 0.632 H -61.8 -46.0 89.0 0.468 0.164 B:P06745:0.163
HOH
2.701
OE2
O
GLU B:227 B:227 126.0 0.663 H -61.3 -45.6 92.0 0.484 0.179 A:P06745:0.179
HOH
2.712
O
O
2cxs 1 P06745 84.38 0.0 X-RAY
2006-05-23 GLU A:227 A:227 122.0 0.642 H -64.1 -45.0 90.0 0.474 0.168 B:P06745:0.168
HOH
2.813
OE1
O
GLU B:227 B:227 126.0 0.663 H -61.9 -46.3 92.0 0.484 0.179 A:P06745:0.179
HOH
2.702
O
O
2cxt 1 P06745 84.38 0.0 X-RAY
2006-05-23 GLU A:227 A:227 123.0 0.647 H -64.8 -44.2 88.0 0.463 0.184 B:P06745:0.184
HOH
2.686
OE1
O
GLU B:227 B:227 125.0 0.658 H -62.0 -44.9 91.0 0.479 0.179 A:P06745:0.179
HOH
2.796
O
O
2cxu 1 P06745 84.38 0.0 X-RAY
2006-05-23 GLU A:227 A:227 123.0 0.647 H -65.3 -44.1 89.0 0.468 0.179 B:P06745:0.179
HOH
2.714
OE2
O
GLU B:227 B:227 125.0 0.658 H -61.0 -46.3 94.0 0.495 0.163 A:P06745:0.163
HOH
2.606
OE1
O
1u0e 1 P06745 84.05 0.0 X-RAY
2004-11-02 GLU A:227 A:226 119.0 0.626 H -62.0 -43.2 90.0 0.474 0.152 B:P06745:0.153
BME
HOH
9.582
2.484
C
OE1
C2
O
GLU B:227 B:226 149.0 0.784 H -59.8 -45.5 114.0 0.6 0.184 A:P06745:0.184
HOH
2.699
O
O
1u0f 1 P06745 84.05 0.0 X-RAY
2004-11-02 GLU A:227 A:226 144.0 0.758 H -65.8 -45.8 115.0 0.605 0.153 B:P06745:0.153
GOL
HOH
4.171
2.783
OE1
OE1
O3
O
GLU B:227 B:226 151.0 0.795 H -59.3 -45.3 116.0 0.611 0.184 A:P06745:0.184
GOL
HOH
4.244
2.801
OE1
O
O3
O
1u0g 1 P06745 84.05 0.0 X-RAY
2004-11-02 GLU A:227 A:226 122.0 0.642 H -63.1 -45.5 88.0 0.463 0.179 B:P06745:0.179
GOL
HOH
4.279
2.803
OE1
O
O3
O
GLU B:227 B:226 130.0 0.684 H -61.2 -43.3 90.0 0.474 0.21 A:P06745:0.211
HOH
3.468
CB
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p06744-f1 1 P06744 94.98 0.0 GLU A:227 A:227 123.0 0.647 H -59.2 -53.2