Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 34872378 . T A CCDS54246.1:NM_001184722.1:c.791gTg>gAg_NP_001171651.1:p.264V>E Homo sapiens glucose-6-phosphate isomerase (GPI), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1iri 1 P06744 94.98 0.0 X-RAY
 2002-06-05 VAL A:253 A:253 1.0 0.006 H -66.0 -43.8 1.0 0.006 0.0
VAL B:253 B:253 0.0 0.0 H -68.4 -42.1 0.0 0.0 0.0
VAL C:253 C:253 0.0 0.0 H -62.6 -45.1 NA NA NA
VAL D:253 D:253 1.0 0.006 H -65.1 -49.5 NA NA NA
1jiq 1 P06744 94.98 0.0 X-RAY
 2002-06-19 VAL A:253 A:253 0.0 0.0 H -68.1 -45.7 0.0 0.0 0.0 HOH
 4.808
 N
 O
VAL B:253 B:253 0.0 0.0 H -65.3 -45.0 0.0 0.0 0.0 HOH
 4.700
 N
 O
VAL C:253 C:253 0.0 0.0 H -60.9 -53.0 NA NA NA
VAL D:253 D:253 0.0 0.0 H -64.2 -47.6 NA NA NA
1nuh 1 P06744 94.98 0.0 X-RAY
 2003-02-11 VAL A:253 A:252 0.0 0.0 H -58.5 -48.9 0.0 0.0 0.0 HOH
 6.946
 CG1
 O
1jlh 1 P06744 94.8 0.0 X-RAY
 2003-02-11 VAL A:253 A:252 1.0 0.006 H -63.4 -42.3 1.0 0.006 0.0 HOH
 4.715
 N
 O
VAL B:253 B:252 0.0 0.0 H -68.8 -34.0 0.0 0.0 0.0 HOH
 7.014
 CG1
 O
VAL C:253 C:252 0.0 0.0 H -60.1 -42.7 NA NA NA
VAL D:253 D:252 0.0 0.0 H -63.3 -40.8 NA NA NA
1iat 1 P06744 94.97 0.0 X-RAY
 2001-05-30 VAL A:252 A:252 0.0 0.0 H -65.9 -41.3 0.0 0.0 0.0 HOH
 4.623
 O
 O
6xuh 1 P06744 94.96 0.0 X-RAY
 2020-07-29 VAL A:252 A:252 0.0 0.0 H -63.7 -50.6 0.0 0.0 0.0 PA5
 9.966
 CG2
 O1P
VAL B:252 B:252 0.0 0.0 H -64.0 -50.3 0.0 0.0 0.0 HOH
 6.718
 N
 O
VAL C:252 C:252 0.0 0.0 H -64.1 -50.6 NA NA NA
VAL D:252 D:252 0.0 0.0 H -63.9 -50.4 NA NA NA
6xui 1 P06744 94.96 0.0 X-RAY
 2020-07-29 VAL A:252 A:252 0.0 0.0 H -59.9 -49.9 0.0 0.0 0.0 HOH
 4.722
 N
 O
VAL B:252 B:252 0.0 0.0 H -62.8 -47.2 NA NA NA
VAL C:252 C:252 0.0 0.0 H -65.6 -44.0 NA NA NA
VAL D:252 D:252 0.0 0.0 H -60.9 -48.1 0.0 0.0 0.0 HOH
 4.646
 N
 O
1gzd 1 P08059 88.51 0.0 X-RAY
 2002-06-10 VAL A:252 A:252 0.0 0.0 H -50.9 -49.5 0.0 0.0 0.0 HOH
 9.535
 CG2
 O
1gzv 1 P08059 88.51 0.0 X-RAY
 2002-10-31 VAL A:252 A:252 0.0 0.0 H -51.3 -49.5 0.0 0.0 0.0
1g98 1 Q9N1E2 87.81 0.0 X-RAY
 2001-06-01 VAL A:253 A:252 1.0 0.006 H -58.5 -56.8 1.0 0.006 0.0 HOH
 4.349
 CG1
 O
VAL B:253 B:252 2.0 0.013 H -64.8 -41.6 2.0 0.013 0.0 HOH
 6.524
 N
 O
1hm5 1 Q9N1E2 87.81 0.0 X-RAY
 2002-09-27 VAL A:253 A:252 0.0 0.0 H -68.8 -45.5 0.0 0.0 0.0 HOH
 6.260
 N
 O
VAL B:253 B:252 0.0 0.0 H -62.7 -49.8 0.0 0.0 0.0 HOH
 4.660
 N
 O
1hox 1 Q9N1E2 87.81 0.0 X-RAY
 2001-07-20 VAL A:253 A:252 2.0 0.013 H -63.8 -44.1 2.0 0.013 0.0 HOH
 6.219
 N
 O
VAL B:253 B:252 2.0 0.013 H -63.0 -49.4 2.0 0.013 0.0 HOH
 6.226
 N
 O
1xtb 1 Q9N1E2 87.81 0.0 X-RAY
 2005-03-22 VAL A:253 A:252 1.0 0.006 H -59.1 -49.2 1.0 0.006 0.0 HOH
 9.793
 CG2
 O
VAL B:253 B:1252 1.0 0.006 H -56.6 -44.2 1.0 0.006 0.0 HOH
 8.567
 O
 O
1n8t 1 Q9N1E2 87.97 0.0 X-RAY
 2003-03-04 VAL A:252 A:252 0.0 0.0 H -68.5 -45.7 0.0 0.0 0.0 HOH
 5.336
 N
 O
VAL B:252 B:252 0.0 0.0 H -65.2 -52.4 0.0 0.0 0.0 HOH
 4.728
 O
 O
1dqr 1 Q9N1E2 87.79 0.0 X-RAY
 2000-02-09 VAL A:252 A:252 0.0 0.0 H -55.9 -45.2 0.0 0.0 0.0 HOH
 7.775
 O
 O
VAL B:252 B:252 2.0 0.013 H -66.7 -32.1 2.0 0.013 0.0 HOH
 6.722
 N
 O
1koj 1 Q9N1E2 87.79 0.0 X-RAY
 2002-05-03 VAL A:252 A:252 1.0 0.006 H -80.4 -25.0 1.0 0.006 0.0 PAN
HOH
 9.864
5.525
 CG2
N
 O3P
O
VAL B:252 B:252 2.0 0.013 H -56.7 -36.3 2.0 0.013 0.0 HOH
 6.112
 O
 O
2cvp 1 P06745 84.38 0.0 X-RAY
 2006-05-23 VAL A:253 A:253 1.0 0.006 H -65.2 -49.6 1.0 0.006 0.0 HOH
 4.785
 O
 O
VAL B:253 B:253 0.0 0.0 H -62.7 -47.1 0.0 0.0 0.0 HOH
 4.708
 N
 O
2cxn 1 P06745 84.38 0.0 X-RAY
 2006-05-23 VAL A:253 A:253 2.0 0.013 H -62.6 -46.0 2.0 0.013 0.0 HOH
 4.754
 O
 O
VAL B:253 B:253 0.0 0.0 H -61.9 -46.5 0.0 0.0 0.0 HOH
 4.763
 N
 O
2cxo 1 P06745 84.38 0.0 X-RAY
 2006-05-23 VAL A:253 A:253 0.0 0.0 H -63.9 -47.3 0.0 0.0 0.0 HOH
 4.808
 N
 O
VAL B:253 B:253 1.0 0.006 H -63.6 -41.2 1.0 0.006 0.0 HOH
 4.341
 O
 O
2cxp 1 P06745 84.38 0.0 X-RAY
 2006-05-23 VAL A:253 A:253 2.0 0.013 H -64.7 -46.6 2.0 0.013 0.0 HOH
 4.388
 O
 O
VAL B:253 B:253 0.0 0.0 H -63.2 -48.1 0.0 0.0 0.0 HOH
 4.697
 N
 O
2cxq 1 P06745 84.38 0.0 X-RAY
 2006-05-23 VAL A:253 A:253 1.0 0.006 H -63.5 -45.4 1.0 0.006 0.0 HOH
 4.679
 O
 O
VAL B:253 B:253 1.0 0.006 H -66.6 -37.5 1.0 0.006 0.0 HOH
 4.452
 O
 O
2cxr 1 P06745 84.38 0.0 X-RAY
 2006-05-23 VAL A:253 A:253 2.0 0.013 H -62.5 -45.7 2.0 0.013 0.0 HOH
 4.600
 O
 O
VAL B:253 B:253 2.0 0.013 H -64.1 -40.7 2.0 0.013 0.0 HOH
 4.443
 O
 O
2cxs 1 P06745 84.38 0.0 X-RAY
 2006-05-23 VAL A:253 A:253 2.0 0.013 H -61.3 -47.9 2.0 0.013 0.0 HOH
 4.813
 N
 O
VAL B:253 B:253 2.0 0.013 H -65.0 -41.9 2.0 0.013 0.0 HOH
 4.384
 O
 O
2cxt 1 P06745 84.38 0.0 X-RAY
 2006-05-23 VAL A:253 A:253 3.0 0.019 H -62.0 -48.5 3.0 0.019 0.0 HOH
 4.703
 O
 O
VAL B:253 B:253 2.0 0.013 H -64.7 -43.2 2.0 0.013 0.0 HOH
 4.826
 N
 O
2cxu 1 P06745 84.38 0.0 X-RAY
 2006-05-23 VAL A:253 A:253 2.0 0.013 H -63.4 -46.8 2.0 0.013 0.0 HOH
 4.722
 O
 O
VAL B:253 B:253 0.0 0.0 H -62.8 -47.1 0.0 0.0 0.0 HOH
 4.852
 N
 O
1u0e 1 P06745 84.05 0.0 X-RAY
 2004-11-02 VAL A:253 A:252 0.0 0.0 H -64.7 -44.9 0.0 0.0 0.0 GOL
HOH
 9.709
4.766
 CG1
O
 O1
O
VAL B:253 B:252 1.0 0.006 H -66.4 -47.9 1.0 0.006 0.0 HOH
 4.639
 N
 O
1u0f 1 P06745 84.05 0.0 X-RAY
 2004-11-02 VAL A:253 A:252 0.0 0.0 H -62.3 -44.9 0.0 0.0 0.0 GOL
HOH
 9.986
4.966
 CG1
O
 O1
O
VAL B:253 B:252 0.0 0.0 H -62.2 -43.9 0.0 0.0 0.0 HOH
 6.998
 CG1
 O
1u0g 1 P06745 84.05 0.0 X-RAY
 2004-11-02 VAL A:253 A:252 0.0 0.0 H -60.7 -50.8 0.0 0.0 0.0 GOL
HOH
 9.680
4.983
 CG1
O
 O1
O
VAL B:253 B:252 1.0 0.006 H -65.7 -47.6 1.0 0.006 0.0 HOH
 6.427
 O
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p06744-f1 1 P06744 94.98 0.0 VAL A:253 A:253 1.0 0.006 H -61.8 -44.4