Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr19 | 34884165 | . | C | A | CCDS54246.1:NM_001184722.1:c.850Cgc>Agc_NP_001171651.1:p.284R>S | Homo sapiens glucose-6-phosphate isomerase (GPI), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
1iri | 1 | P06744 | 94.98 | 0.0 |
X-RAY |
2002-06-05 | ARG | A:273 | A:273 | 7.0 | 0.031 | G | -68.6 | -1.9 | 7.0 | 0.031 | 0.0 |
E4P HOH |
4.685 2.888 |
NH1 O |
O1 O |
||
ARG | B:273 | B:273 | 7.0 | 0.031 | G | -74.6 | 8.4 | 7.0 | 0.031 | 0.0 |
E4P HOH |
4.533 2.730 |
NH1 NH1 |
O1 O |
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ARG | C:273 | C:273 | 6.0 | 0.027 | G | -73.2 | 0.1 | NA | NA | NA | |||||||||||||
ARG | D:273 | D:273 | 6.0 | 0.027 | G | -74.4 | 5.6 | NA | NA | NA | |||||||||||||
1jiq | 1 | P06744 | 94.98 | 0.0 |
X-RAY |
2002-06-19 | ARG | A:273 | A:273 | 5.0 | 0.022 | G | -79.5 | 5.7 | 5.0 | 0.022 | 0.0 |
HOH |
2.776 |
O |
O |
||
ARG | B:273 | B:273 | 5.0 | 0.022 | G | -75.6 | 5.0 | 5.0 | 0.022 | 0.0 |
HOH |
2.801 |
O |
O |
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ARG | C:273 | C:273 | 7.0 | 0.031 | G | -78.6 | 4.4 | NA | NA | NA | |||||||||||||
ARG | D:273 | D:273 | 5.0 | 0.022 | G | -75.7 | 2.7 | NA | NA | NA | |||||||||||||
1nuh | 1 | P06744 | 94.98 | 0.0 |
X-RAY |
2003-02-11 | ARG | A:273 | A:272 | 3.0 | 0.013 | G | -74.6 | 2.4 | 3.0 | 0.013 | 0.0 |
PA5 HOH |
3.981 2.706 |
N O |
O1A O |
||
1jlh | 1 | P06744 | 94.8 | 0.0 |
X-RAY |
2003-02-11 | ARG | A:273 | A:272 | 3.0 | 0.013 | G | -75.8 | 7.7 | 3.0 | 0.013 | 0.0 |
HOH |
2.881 |
O |
O |
||
ARG | B:273 | B:272 | 6.0 | 0.027 | G | -75.3 | 9.8 | 6.0 | 0.027 | 0.0 |
HOH |
2.746 |
O |
O |
|||||||||
ARG | C:273 | C:272 | 4.0 | 0.018 | G | -72.1 | 4.3 | NA | NA | NA | |||||||||||||
ARG | D:273 | D:272 | 5.0 | 0.022 | G | -79.8 | 12.0 | NA | NA | NA | |||||||||||||
1iat | 1 | P06744 | 94.97 | 0.0 |
X-RAY |
2001-05-30 | ARG | A:272 | A:272 | 6.0 | 0.027 | G | -74.5 | 4.1 | 6.0 | 0.027 | 0.0 |
SO4 BME HOH |
7.655 4.357 2.780 |
N N O |
O3 C2 O |
||
6xuh | 1 | P06744 | 94.96 | 0.0 |
X-RAY |
2020-07-29 | ARG | A:272 | A:272 | 4.0 | 0.018 | G | -70.3 | 7.2 | 4.0 | 0.018 | 0.0 |
PA5 HOH |
4.047 3.276 |
N O |
O1A O |
||
ARG | B:272 | B:272 | 6.0 | 0.027 | G | -70.3 | 6.9 | 6.0 | 0.027 | 0.0 |
O1B HOH |
2.799 2.780 |
N O |
N O |
|||||||||
ARG | C:272 | C:272 | 5.0 | 0.022 | G | -70.2 | 7.8 | NA | NA | NA | |||||||||||||
ARG | D:272 | D:272 | 6.0 | 0.027 | G | -69.5 | 6.6 | NA | NA | NA | |||||||||||||
6xui | 1 | P06744 | 94.96 | 0.0 |
X-RAY |
2020-07-29 | ARG | A:272 | A:272 | 6.0 | 0.027 | G | -76.8 | 1.5 | 6.0 | 0.027 | 0.0 |
PA5 HOH |
4.111 2.777 |
NH2 NH2 |
O1A O |
||
ARG | B:272 | B:272 | 6.0 | 0.027 | G | -73.1 | 1.6 | NA | NA | NA | |||||||||||||
ARG | C:272 | C:272 | 6.0 | 0.027 | G | -76.6 | -0.8 | NA | NA | NA | |||||||||||||
ARG | D:272 | D:272 | 6.0 | 0.027 | G | -75.4 | -2.7 | 6.0 | 0.027 | 0.0 |
PA5 HOH |
4.053 2.722 |
NH2 O |
O1 O |
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1gzd | 1 | P08059 | 88.51 | 0.0 |
X-RAY |
2002-06-10 | ARG | A:272 | A:272 | 7.0 | 0.031 | G | -81.2 | 14.5 | 7.0 | 0.031 | 0.0 |
SO4 HOH |
7.787 2.723 |
N O |
O3 O |
||
1gzv | 1 | P08059 | 88.51 | 0.0 |
X-RAY |
2002-10-31 | ARG | A:272 | A:272 | 7.0 | 0.031 | G | -78.7 | 13.0 | 7.0 | 0.031 | 0.0 |
PA5 |
4.080 |
N |
O1A |
||
1g98 | 1 | Q9N1E2 | 87.81 | 0.0 |
X-RAY |
2001-06-01 | ARG | A:273 | A:272 | 6.0 | 0.027 | G | -73.1 | 1.2 | 6.0 | 0.027 | 0.0 |
PA5 HOH |
4.037 2.747 |
N O |
O1A O |
||
ARG | B:273 | B:272 | 6.0 | 0.027 | G | -73.4 | 3.6 | 6.0 | 0.027 | 0.0 |
PA5 HOH |
4.024 2.720 |
N O |
O1A O |
|||||||||
1hm5 | 1 | Q9N1E2 | 87.81 | 0.0 |
X-RAY |
2002-09-27 | ARG | A:273 | A:272 | 4.0 | 0.018 | G | -73.3 | 3.3 | 4.0 | 0.018 | 0.0 |
HOH |
2.747 |
O |
O |
||
ARG | B:273 | B:272 | 6.0 | 0.027 | G | -73.6 | 3.3 | 6.0 | 0.027 | 0.0 |
HOH |
2.777 |
N |
O |
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1hox | 1 | Q9N1E2 | 87.81 | 0.0 |
X-RAY |
2001-07-20 | ARG | A:273 | A:272 | 5.0 | 0.022 | G | -76.9 | 4.2 | 5.0 | 0.022 | 0.0 |
F6P HOH |
4.311 2.673 |
NH1 O |
O3 O |
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ARG | B:273 | B:272 | 6.0 | 0.027 | G | -82.2 | 8.1 | 6.0 | 0.027 | 0.0 |
F6P HOH |
4.080 2.690 |
NH1 O |
O3 O |
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1xtb | 1 | Q9N1E2 | 87.81 | 0.0 |
X-RAY |
2005-03-22 | ARG | A:273 | A:272 | 6.0 | 0.027 | G | -71.1 | 5.4 | 6.0 | 0.027 | 0.0 |
S6P HOH |
2.946 2.742 |
N O |
O1 O |
||
ARG | B:273 | B:1272 | 7.0 | 0.031 | G | -71.1 | 5.0 | 7.0 | 0.031 | 0.0 |
S6P HOH |
2.901 2.892 |
N O |
O1 O |
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1n8t | 1 | Q9N1E2 | 87.97 | 0.0 |
X-RAY |
2003-03-04 | ARG | A:272 | A:272 | 6.0 | 0.027 | G | -74.3 | 3.9 | 6.0 | 0.027 | 0.0 |
HOH |
2.432 |
O |
O |
||
ARG | B:272 | B:272 | 5.0 | 0.022 | G | -75.2 | 8.2 | 5.0 | 0.022 | 0.0 |
HOH |
2.553 |
O |
O |
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1dqr | 1 | Q9N1E2 | 87.79 | 0.0 |
X-RAY |
2000-02-09 | ARG | A:272 | A:272 | 12.0 | 0.053 | G | -82.4 | 9.9 | 12.0 | 0.053 | 0.0 |
6PG HOH |
3.422 2.806 |
NH1 O |
O1 O |
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ARG | B:272 | B:272 | 9.0 | 0.04 | G | -83.7 | 13.0 | 9.0 | 0.04 | 0.0 |
6PG HOH |
2.992 2.761 |
NH1 O |
O1A O |
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1koj | 1 | Q9N1E2 | 87.79 | 0.0 |
X-RAY |
2002-05-03 | ARG | A:272 | A:272 | 8.0 | 0.036 | G | -72.9 | 5.2 | 8.0 | 0.036 | 0.0 |
PAN HOH |
2.639 2.819 |
N O |
ON1 O |
||
ARG | B:272 | B:272 | 9.0 | 0.04 | G | -73.9 | 0.8 | 9.0 | 0.04 | 0.0 |
PAN HOH |
2.692 2.920 |
N O |
ON1 O |
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2cvp | 1 | P06745 | 84.38 | 0.0 |
X-RAY |
2006-05-23 | ARG | A:273 | A:273 | 6.0 | 0.027 | G | -77.6 | 4.3 | 6.0 | 0.027 | 0.0 |
ACT HOH |
7.833 2.701 |
N O |
OXT O |
||
ARG | B:273 | B:273 | 5.0 | 0.022 | G | -82.7 | 5.5 | 5.0 | 0.022 | 0.0 |
HOH |
2.798 |
O |
O |
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2cxn | 1 | P06745 | 84.38 | 0.0 |
X-RAY |
2006-05-23 | ARG | A:273 | A:273 | 4.0 | 0.018 | G | -76.5 | 3.6 | 4.0 | 0.018 | 0.0 |
PO4 HOH |
7.742 2.763 |
N O |
O2 O |
||
ARG | B:273 | B:273 | 5.0 | 0.022 | G | -75.9 | 3.9 | 5.0 | 0.022 | 0.0 |
HOH |
2.782 |
O |
O |
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2cxo | 1 | P06745 | 84.38 | 0.0 |
X-RAY |
2006-05-23 | ARG | A:273 | A:273 | 5.0 | 0.022 | G | -76.3 | 3.1 | 5.0 | 0.022 | 0.0 |
DER HOH |
4.448 2.654 |
NH1 O |
OH1 O |
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ARG | B:273 | B:273 | 4.0 | 0.018 | G | -76.5 | 4.5 | 4.0 | 0.018 | 0.0 |
DER HOH |
4.372 2.744 |
NH1 O |
OH1 O |
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2cxp | 1 | P06745 | 84.38 | 0.0 |
X-RAY |
2006-05-23 | ARG | A:273 | A:273 | 7.0 | 0.031 | G | -73.3 | 2.0 | 7.0 | 0.031 | 0.0 |
A5P HOH |
3.238 2.730 |
N O |
O1 O |
||
ARG | B:273 | B:273 | 4.0 | 0.018 | G | -74.4 | 3.9 | 4.0 | 0.018 | 0.0 |
A5P HOH |
3.498 2.756 |
N O |
O1 O |
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2cxq | 1 | P06745 | 84.38 | 0.0 |
X-RAY |
2006-05-23 | ARG | A:273 | A:273 | 5.0 | 0.022 | G | -75.0 | 4.0 | 5.0 | 0.022 | 0.0 |
S6P HOH |
2.926 2.785 |
N O |
O1 O |
||
ARG | B:273 | B:273 | 6.0 | 0.027 | G | -75.9 | 3.4 | 6.0 | 0.027 | 0.0 |
S6P HOH |
2.999 2.749 |
N O |
O1 O |
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2cxr | 1 | P06745 | 84.38 | 0.0 |
X-RAY |
2006-05-23 | ARG | A:273 | A:273 | 6.0 | 0.027 | G | -74.0 | 3.6 | 6.0 | 0.027 | 0.0 |
6PG HOH |
3.120 2.702 |
N O |
O1A O |
||
ARG | B:273 | B:273 | 6.0 | 0.027 | G | -75.8 | 4.4 | 6.0 | 0.027 | 0.0 |
6PG HOH |
3.049 2.716 |
N O |
O1A O |
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2cxs | 1 | P06745 | 84.38 | 0.0 |
X-RAY |
2006-05-23 | ARG | A:273 | A:273 | 5.0 | 0.022 | G | -76.9 | 5.1 | 5.0 | 0.022 | 0.0 |
F6P HOH |
4.268 2.747 |
NH1 O |
O3 O |
||
ARG | B:273 | B:273 | 5.0 | 0.022 | G | -76.7 | 4.1 | 5.0 | 0.022 | 0.0 |
F6P HOH |
4.144 2.788 |
NH1 O |
O3 O |
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2cxt | 1 | P06745 | 84.38 | 0.0 |
X-RAY |
2006-05-23 | ARG | A:273 | A:273 | 6.0 | 0.027 | G | -76.1 | 5.5 | 6.0 | 0.027 | 0.0 |
F6P HOH |
4.215 2.699 |
NH1 O |
O3 O |
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ARG | B:273 | B:273 | 5.0 | 0.022 | G | -76.9 | 4.4 | 5.0 | 0.022 | 0.0 |
F6P HOH |
4.094 2.761 |
NH1 O |
O3 O |
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2cxu | 1 | P06745 | 84.38 | 0.0 |
X-RAY |
2006-05-23 | ARG | A:273 | A:273 | 4.0 | 0.018 | G | -77.1 | 3.9 | 4.0 | 0.018 | 0.0 |
PO4 HOH |
7.726 2.723 |
N O |
O2 O |
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ARG | B:273 | B:273 | 5.0 | 0.022 | G | -74.6 | 4.8 | 5.0 | 0.022 | 0.0 |
HOH |
2.742 |
O |
O |
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1u0e | 1 | P06745 | 84.05 | 0.0 |
X-RAY |
2004-11-02 | ARG | A:273 | A:272 | 5.0 | 0.022 | G | -79.4 | 5.6 | 5.0 | 0.022 | 0.0 |
SO4 HOH |
7.520 2.690 |
N O |
O3 O |
||
ARG | B:273 | B:272 | 6.0 | 0.027 | G | -77.3 | 3.9 | 6.0 | 0.027 | 0.0 |
SO4 HOH |
3.637 2.765 |
N O |
O1 O |
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1u0f | 1 | P06745 | 84.05 | 0.0 |
X-RAY |
2004-11-02 | ARG | A:273 | A:272 | 7.0 | 0.031 | G | -81.0 | 4.9 | 7.0 | 0.031 | 0.0 |
G6P G6Q HOH |
4.209 2.925 2.788 |
NH1 N O |
O3 O1 O |
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ARG | B:273 | B:272 | 6.0 | 0.027 | G | -77.3 | 5.2 | 6.0 | 0.027 | 0.0 |
SO4 SO4 HOH |
7.664 3.616 2.755 |
N N O |
O3 O1 O |
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1u0g | 1 | P06745 | 84.05 | 0.0 |
X-RAY |
2004-11-02 | ARG | A:273 | A:272 | 6.0 | 0.027 | G | -73.3 | 2.3 | 6.0 | 0.027 | 0.0 |
E4P HOH |
4.448 2.746 |
NH1 O |
O1 O |
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ARG | B:273 | B:272 | 5.0 | 0.022 | G | -75.2 | 2.3 | 5.0 | 0.022 | 0.0 |
E4P HOH |
4.379 2.664 |
NH1 O |
O1 O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p06744-f1 | 1 | P06744 | 94.98 | 0.0 | ARG | A:273 | A:273 | 3.0 | 0.013 | G | -70.8 | 1.9 |