Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr19 | 34887267 | . | C | A | CCDS54246.1:NM_001184722.1:c.1157aCa>aAa_NP_001171651.1:p.386T>K | Homo sapiens glucose-6-phosphate isomerase (GPI), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
1iri | 1 | P06744 | 94.98 | 0.0 |
X-RAY |
2002-06-05 | THR | A:375 | A:375 | 17.0 | 0.121 | -116.3 | -134.8 | 0.0 | 0.0 | 0.121 |
B:P06744:0.121 |
HOH |
2.609 |
OG1 |
O |
||
THR | B:375 | B:375 | 16.0 | 0.114 | -115.5 | -139.6 | 0.0 | 0.0 | 0.114 |
A:P06744:0.114 |
HOH |
2.704 |
OG1 |
O |
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THR | C:375 | C:375 | 17.0 | 0.121 | -114.0 | -132.8 | NA | NA | NA | ||||||||||||||
THR | D:375 | D:375 | 16.0 | 0.114 | -118.1 | -140.9 | NA | NA | NA | ||||||||||||||
1jiq | 1 | P06744 | 94.98 | 0.0 |
X-RAY |
2002-06-19 | THR | A:375 | A:375 | 16.0 | 0.114 | -119.6 | -139.2 | 0.0 | 0.0 | 0.114 |
B:P06744:0.114 |
HOH |
2.809 |
OG1 |
O |
||
THR | B:375 | B:375 | 16.0 | 0.114 | -116.7 | -140.7 | 0.0 | 0.0 | 0.114 |
A:P06744:0.114 |
HOH |
2.825 |
OG1 |
O |
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THR | C:375 | C:375 | 16.0 | 0.114 | -116.7 | -140.2 | NA | NA | NA | ||||||||||||||
THR | D:375 | D:375 | 16.0 | 0.114 | -116.4 | -136.8 | NA | NA | NA | ||||||||||||||
1nuh | 1 | P06744 | 94.98 | 0.0 |
X-RAY |
2003-02-11 | THR | A:375 | A:374 | 18.0 | 0.129 | -121.6 | -136.3 | 0.0 | 0.0 | 0.129 |
A:P06744:0.129 |
HOH |
5.545 |
C |
O |
||
1jlh | 1 | P06744 | 94.8 | 0.0 |
X-RAY |
2003-02-11 | THR | A:375 | A:374 | 18.0 | 0.129 | -122.0 | -136.5 | 0.0 | 0.0 | 0.129 |
B:P06744:0.129 |
HOH |
2.766 |
OG1 |
O |
||
THR | B:375 | B:374 | 19.0 | 0.136 | -122.9 | -136.0 | 0.0 | 0.0 | 0.136 |
A:P06744:0.136 |
HOH |
2.761 |
O |
O |
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THR | C:375 | C:374 | 16.0 | 0.114 | -120.9 | -132.2 | NA | NA | NA | ||||||||||||||
THR | D:375 | D:374 | 19.0 | 0.136 | -117.0 | -134.8 | NA | NA | NA | ||||||||||||||
1iat | 1 | P06744 | 94.97 | 0.0 |
X-RAY |
2001-05-30 | THR | A:374 | A:374 | 16.0 | 0.114 | -118.5 | -138.0 | 0.0 | 0.0 | 0.114 |
A:P06744:0.114 |
HOH |
2.920 |
OG1 |
O |
||
6xuh | 1 | P06744 | 94.96 | 0.0 |
X-RAY |
2020-07-29 | THR | A:374 | A:374 | 18.0 | 0.129 | -99.3 | -138.5 | 0.0 | 0.0 | 0.129 |
B:P06744:0.129 |
HOH |
6.862 |
N |
O |
||
THR | B:374 | B:374 | 19.0 | 0.136 | -99.4 | -138.7 | 0.0 | 0.0 | 0.136 |
A:P06744:0.136 |
HOH |
5.460 |
C |
O |
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THR | C:374 | C:374 | 17.0 | 0.121 | -100.6 | -138.2 | NA | NA | NA | ||||||||||||||
THR | D:374 | D:374 | 18.0 | 0.129 | -100.0 | -138.1 | NA | NA | NA | ||||||||||||||
6xui | 1 | P06744 | 94.96 | 0.0 |
X-RAY |
2020-07-29 | THR | A:374 | A:374 | 16.0 | 0.114 | -111.8 | -139.0 | 0.0 | 0.0 | 0.114 |
D:P06744:0.114 |
PG6 HOH |
6.685 2.900 |
N OG1 |
O1 O |
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THR | B:374 | B:374 | 17.0 | 0.121 | -113.0 | -136.4 | NA | NA | NA | ||||||||||||||
THR | C:374 | C:374 | 16.0 | 0.114 | -113.4 | -141.3 | NA | NA | NA | ||||||||||||||
THR | D:374 | D:374 | 15.0 | 0.107 | -118.5 | -139.3 | 0.0 | 0.0 | 0.107 |
A:P06744:0.107 |
PG6 HOH |
6.719 2.926 |
N OG1 |
C11 O |
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1gzd | 1 | P08059 | 88.51 | 0.0 |
X-RAY |
2002-06-10 | THR | A:374 | A:374 | 16.0 | 0.114 | -116.8 | -138.9 | 0.0 | 0.0 | 0.114 |
A:P08059:0.114 |
HOH |
2.764 |
OG1 |
O |
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1gzv | 1 | P08059 | 88.51 | 0.0 |
X-RAY |
2002-10-31 | THR | A:374 | A:374 | 17.0 | 0.121 | -115.8 | -141.3 | 0.0 | 0.0 | 0.121 |
A:P08059:0.121 |
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1g98 | 1 | Q9N1E2 | 87.81 | 0.0 |
X-RAY |
2001-06-01 | THR | A:375 | A:374 | 16.0 | 0.114 | -119.9 | -139.8 | 0.0 | 0.0 | 0.114 |
B:Q9N1E2:0.114 |
HOH |
2.823 |
OG1 |
O |
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THR | B:375 | B:374 | 16.0 | 0.114 | -119.3 | -141.8 | 0.0 | 0.0 | 0.114 |
A:Q9N1E2:0.114 |
HOH |
2.771 |
OG1 |
O |
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1hm5 | 1 | Q9N1E2 | 87.81 | 0.0 |
X-RAY |
2002-09-27 | THR | A:375 | A:374 | 16.0 | 0.114 | -121.2 | -140.7 | 0.0 | 0.0 | 0.114 |
B:Q9N1E2:0.114 |
HOH |
2.760 |
OG1 |
O |
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THR | B:375 | B:374 | 19.0 | 0.136 | -120.1 | -140.7 | 0.0 | 0.0 | 0.136 |
A:Q9N1E2:0.136 |
HOH |
2.712 |
OG1 |
O |
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1hox | 1 | Q9N1E2 | 87.81 | 0.0 |
X-RAY |
2001-07-20 | THR | A:375 | A:374 | 20.0 | 0.143 | -117.9 | -143.3 | 0.0 | 0.0 | 0.143 |
B:Q9N1E2:0.143 |
HOH |
2.750 |
OG1 |
O |
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THR | B:375 | B:374 | 19.0 | 0.136 | -119.7 | -142.9 | 0.0 | 0.0 | 0.136 |
A:Q9N1E2:0.136 |
HOH |
2.701 |
OG1 |
O |
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1xtb | 1 | Q9N1E2 | 87.81 | 0.0 |
X-RAY |
2005-03-22 | THR | A:375 | A:374 | 18.0 | 0.129 | -118.3 | -140.4 | 0.0 | 0.0 | 0.129 |
B:Q9N1E2:0.129 |
HOH |
2.797 |
OG1 |
O |
||
THR | B:375 | B:1374 | 18.0 | 0.129 | -120.2 | -143.5 | 0.0 | 0.0 | 0.129 |
A:Q9N1E2:0.129 |
HOH |
2.635 |
OG1 |
O |
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1n8t | 1 | Q9N1E2 | 87.97 | 0.0 |
X-RAY |
2003-03-04 | THR | A:374 | A:374 | 13.0 | 0.093 | -124.6 | -150.8 | 0.0 | 0.0 | 0.093 |
B:Q9N1E2:0.093 |
HOH |
3.272 |
CG2 |
O |
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THR | B:374 | B:374 | 18.0 | 0.129 | -115.4 | -138.5 | 0.0 | 0.0 | 0.129 |
A:Q9N1E2:0.129 |
HOH |
2.825 |
OG1 |
O |
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1dqr | 1 | Q9N1E2 | 87.79 | 0.0 |
X-RAY |
2000-02-09 | THR | A:374 | A:374 | 20.0 | 0.143 | -122.4 | -142.5 | 0.0 | 0.0 | 0.143 |
B:Q9N1E2:0.143 |
HOH |
2.963 |
OG1 |
O |
||
THR | B:374 | B:374 | 19.0 | 0.136 | -122.2 | -143.4 | 0.0 | 0.0 | 0.136 |
A:Q9N1E2:0.136 |
HOH |
5.404 |
C |
O |
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1koj | 1 | Q9N1E2 | 87.79 | 0.0 |
X-RAY |
2002-05-03 | THR | A:374 | A:374 | 16.0 | 0.114 | -119.0 | -134.7 | 0.0 | 0.0 | 0.114 |
B:Q9N1E2:0.114 |
HOH |
2.798 |
OG1 |
O |
||
THR | B:374 | B:374 | 17.0 | 0.121 | -123.0 | -141.8 | 0.0 | 0.0 | 0.121 |
A:Q9N1E2:0.121 |
HOH |
2.915 |
OG1 |
O |
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2cvp | 1 | P06745 | 84.38 | 0.0 |
X-RAY |
2006-05-23 | THR | A:375 | A:375 | 16.0 | 0.114 | -111.2 | -133.9 | 0.0 | 0.0 | 0.114 |
B:P06745:0.114 |
HOH |
2.814 |
OG1 |
O |
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THR | B:375 | B:375 | 16.0 | 0.114 | -113.6 | -136.9 | 0.0 | 0.0 | 0.114 |
A:P06745:0.114 |
HOH |
2.889 |
OG1 |
O |
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2cxn | 1 | P06745 | 84.38 | 0.0 |
X-RAY |
2006-05-23 | THR | A:375 | A:375 | 17.0 | 0.121 | -112.6 | -136.9 | 0.0 | 0.0 | 0.121 |
B:P06745:0.121 |
HOH |
2.920 |
OG1 |
O |
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THR | B:375 | B:375 | 16.0 | 0.114 | -115.8 | -138.0 | 0.0 | 0.0 | 0.114 |
A:P06745:0.114 |
HOH |
2.883 |
OG1 |
O |
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2cxo | 1 | P06745 | 84.38 | 0.0 |
X-RAY |
2006-05-23 | THR | A:375 | A:375 | 16.0 | 0.114 | -113.8 | -136.4 | 0.0 | 0.0 | 0.114 |
B:P06745:0.114 |
HOH |
2.804 |
OG1 |
O |
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THR | B:375 | B:375 | 15.0 | 0.107 | -116.3 | -138.9 | 0.0 | 0.0 | 0.107 |
A:P06745:0.107 |
HOH |
2.878 |
OG1 |
O |
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2cxp | 1 | P06745 | 84.38 | 0.0 |
X-RAY |
2006-05-23 | THR | A:375 | A:375 | 17.0 | 0.121 | -112.8 | -138.5 | 0.0 | 0.0 | 0.121 |
B:P06745:0.121 |
HOH |
2.923 |
OG1 |
O |
||
THR | B:375 | B:375 | 16.0 | 0.114 | -113.8 | -138.8 | 0.0 | 0.0 | 0.114 |
A:P06745:0.114 |
HOH |
2.904 |
OG1 |
O |
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2cxq | 1 | P06745 | 84.38 | 0.0 |
X-RAY |
2006-05-23 | THR | A:375 | A:375 | 17.0 | 0.121 | -112.5 | -135.4 | 0.0 | 0.0 | 0.121 |
B:P06745:0.121 |
HOH |
2.848 |
OG1 |
O |
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THR | B:375 | B:375 | 16.0 | 0.114 | -115.2 | -137.1 | 0.0 | 0.0 | 0.114 |
A:P06745:0.114 |
HOH |
2.862 |
OG1 |
O |
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2cxr | 1 | P06745 | 84.38 | 0.0 |
X-RAY |
2006-05-23 | THR | A:375 | A:375 | 16.0 | 0.114 | -114.1 | -138.9 | 0.0 | 0.0 | 0.114 |
B:P06745:0.114 |
HOH |
2.889 |
OG1 |
O |
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THR | B:375 | B:375 | 16.0 | 0.114 | -114.6 | -137.0 | 0.0 | 0.0 | 0.114 |
A:P06745:0.114 |
HOH |
2.865 |
OG1 |
O |
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2cxs | 1 | P06745 | 84.38 | 0.0 |
X-RAY |
2006-05-23 | THR | A:375 | A:375 | 17.0 | 0.121 | -113.4 | -136.4 | 0.0 | 0.0 | 0.121 |
B:P06745:0.121 |
HOH |
2.870 |
OG1 |
O |
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THR | B:375 | B:375 | 16.0 | 0.114 | -116.2 | -137.8 | 0.0 | 0.0 | 0.114 |
A:P06745:0.114 |
HOH |
2.870 |
OG1 |
O |
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2cxt | 1 | P06745 | 84.38 | 0.0 |
X-RAY |
2006-05-23 | THR | A:375 | A:375 | 16.0 | 0.114 | -112.1 | -134.3 | 0.0 | 0.0 | 0.114 |
B:P06745:0.114 |
HOH |
2.893 |
OG1 |
O |
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THR | B:375 | B:375 | 16.0 | 0.114 | -116.9 | -135.8 | 0.0 | 0.0 | 0.114 |
A:P06745:0.114 |
HOH |
2.942 |
OG1 |
O |
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2cxu | 1 | P06745 | 84.38 | 0.0 |
X-RAY |
2006-05-23 | THR | A:375 | A:375 | 17.0 | 0.121 | -110.3 | -139.0 | 0.0 | 0.0 | 0.121 |
B:P06745:0.121 |
HOH |
2.870 |
OG1 |
O |
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THR | B:375 | B:375 | 16.0 | 0.114 | -115.3 | -139.9 | 0.0 | 0.0 | 0.114 |
A:P06745:0.114 |
HOH |
2.895 |
OG1 |
O |
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1u0e | 1 | P06745 | 84.05 | 0.0 |
X-RAY |
2004-11-02 | THR | A:375 | A:374 | 17.0 | 0.121 | -113.1 | -137.9 | 0.0 | 0.0 | 0.121 |
B:P06745:0.121 |
HOH |
2.816 |
OG1 |
O |
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THR | B:375 | B:374 | 16.0 | 0.114 | -117.1 | -138.1 | 0.0 | 0.0 | 0.114 |
A:P06745:0.114 |
GOL HOH |
9.617 2.822 |
OG1 OG1 |
O1 O |
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1u0f | 1 | P06745 | 84.05 | 0.0 |
X-RAY |
2004-11-02 | THR | A:375 | A:374 | 18.0 | 0.129 | -112.2 | -136.8 | 0.0 | 0.0 | 0.129 |
B:P06745:0.129 |
HOH |
2.811 |
OG1 |
O |
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THR | B:375 | B:374 | 16.0 | 0.114 | -115.5 | -137.1 | 0.0 | 0.0 | 0.114 |
A:P06745:0.114 |
HOH |
2.876 |
OG1 |
O |
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1u0g | 1 | P06745 | 84.05 | 0.0 |
X-RAY |
2004-11-02 | THR | A:375 | A:374 | 17.0 | 0.121 | -113.1 | -137.5 | 0.0 | 0.0 | 0.121 |
B:P06745:0.121 |
HOH |
2.892 |
OG1 |
O |
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THR | B:375 | B:374 | 16.0 | 0.114 | -115.1 | -135.9 | 0.0 | 0.0 | 0.114 |
A:P06745:0.114 |
HOH |
2.924 |
OG1 |
O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p06744-f1 | 1 | P06744 | 94.98 | 0.0 | THR | A:375 | A:375 | 16.0 | 0.114 | -124.9 | -135.1 |