Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 34887267 . C A CCDS54246.1:NM_001184722.1:c.1157aCa>aAa_NP_001171651.1:p.386T>K Homo sapiens glucose-6-phosphate isomerase (GPI), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1iri 1 P06744 94.98 0.0 X-RAY
2002-06-05 THR A:375 A:375 17.0 0.121 -116.3 -134.8 0.0 0.0 0.121 B:P06744:0.121
HOH
2.609
OG1
O
THR B:375 B:375 16.0 0.114 -115.5 -139.6 0.0 0.0 0.114 A:P06744:0.114
HOH
2.704
OG1
O
THR C:375 C:375 17.0 0.121 -114.0 -132.8 NA NA NA
THR D:375 D:375 16.0 0.114 -118.1 -140.9 NA NA NA
1jiq 1 P06744 94.98 0.0 X-RAY
2002-06-19 THR A:375 A:375 16.0 0.114 -119.6 -139.2 0.0 0.0 0.114 B:P06744:0.114
HOH
2.809
OG1
O
THR B:375 B:375 16.0 0.114 -116.7 -140.7 0.0 0.0 0.114 A:P06744:0.114
HOH
2.825
OG1
O
THR C:375 C:375 16.0 0.114 -116.7 -140.2 NA NA NA
THR D:375 D:375 16.0 0.114 -116.4 -136.8 NA NA NA
1nuh 1 P06744 94.98 0.0 X-RAY
2003-02-11 THR A:375 A:374 18.0 0.129 -121.6 -136.3 0.0 0.0 0.129 A:P06744:0.129
HOH
5.545
C
O
1jlh 1 P06744 94.8 0.0 X-RAY
2003-02-11 THR A:375 A:374 18.0 0.129 -122.0 -136.5 0.0 0.0 0.129 B:P06744:0.129
HOH
2.766
OG1
O
THR B:375 B:374 19.0 0.136 -122.9 -136.0 0.0 0.0 0.136 A:P06744:0.136
HOH
2.761
O
O
THR C:375 C:374 16.0 0.114 -120.9 -132.2 NA NA NA
THR D:375 D:374 19.0 0.136 -117.0 -134.8 NA NA NA
1iat 1 P06744 94.97 0.0 X-RAY
2001-05-30 THR A:374 A:374 16.0 0.114 -118.5 -138.0 0.0 0.0 0.114 A:P06744:0.114
HOH
2.920
OG1
O
6xuh 1 P06744 94.96 0.0 X-RAY
2020-07-29 THR A:374 A:374 18.0 0.129 -99.3 -138.5 0.0 0.0 0.129 B:P06744:0.129
HOH
6.862
N
O
THR B:374 B:374 19.0 0.136 -99.4 -138.7 0.0 0.0 0.136 A:P06744:0.136
HOH
5.460
C
O
THR C:374 C:374 17.0 0.121 -100.6 -138.2 NA NA NA
THR D:374 D:374 18.0 0.129 -100.0 -138.1 NA NA NA
6xui 1 P06744 94.96 0.0 X-RAY
2020-07-29 THR A:374 A:374 16.0 0.114 -111.8 -139.0 0.0 0.0 0.114 D:P06744:0.114
PG6
HOH
6.685
2.900
N
OG1
O1
O
THR B:374 B:374 17.0 0.121 -113.0 -136.4 NA NA NA
THR C:374 C:374 16.0 0.114 -113.4 -141.3 NA NA NA
THR D:374 D:374 15.0 0.107 -118.5 -139.3 0.0 0.0 0.107 A:P06744:0.107
PG6
HOH
6.719
2.926
N
OG1
C11
O
1gzd 1 P08059 88.51 0.0 X-RAY
2002-06-10 THR A:374 A:374 16.0 0.114 -116.8 -138.9 0.0 0.0 0.114 A:P08059:0.114
HOH
2.764
OG1
O
1gzv 1 P08059 88.51 0.0 X-RAY
2002-10-31 THR A:374 A:374 17.0 0.121 -115.8 -141.3 0.0 0.0 0.121 A:P08059:0.121
1g98 1 Q9N1E2 87.81 0.0 X-RAY
2001-06-01 THR A:375 A:374 16.0 0.114 -119.9 -139.8 0.0 0.0 0.114 B:Q9N1E2:0.114
HOH
2.823
OG1
O
THR B:375 B:374 16.0 0.114 -119.3 -141.8 0.0 0.0 0.114 A:Q9N1E2:0.114
HOH
2.771
OG1
O
1hm5 1 Q9N1E2 87.81 0.0 X-RAY
2002-09-27 THR A:375 A:374 16.0 0.114 -121.2 -140.7 0.0 0.0 0.114 B:Q9N1E2:0.114
HOH
2.760
OG1
O
THR B:375 B:374 19.0 0.136 -120.1 -140.7 0.0 0.0 0.136 A:Q9N1E2:0.136
HOH
2.712
OG1
O
1hox 1 Q9N1E2 87.81 0.0 X-RAY
2001-07-20 THR A:375 A:374 20.0 0.143 -117.9 -143.3 0.0 0.0 0.143 B:Q9N1E2:0.143
HOH
2.750
OG1
O
THR B:375 B:374 19.0 0.136 -119.7 -142.9 0.0 0.0 0.136 A:Q9N1E2:0.136
HOH
2.701
OG1
O
1xtb 1 Q9N1E2 87.81 0.0 X-RAY
2005-03-22 THR A:375 A:374 18.0 0.129 -118.3 -140.4 0.0 0.0 0.129 B:Q9N1E2:0.129
HOH
2.797
OG1
O
THR B:375 B:1374 18.0 0.129 -120.2 -143.5 0.0 0.0 0.129 A:Q9N1E2:0.129
HOH
2.635
OG1
O
1n8t 1 Q9N1E2 87.97 0.0 X-RAY
2003-03-04 THR A:374 A:374 13.0 0.093 -124.6 -150.8 0.0 0.0 0.093 B:Q9N1E2:0.093
HOH
3.272
CG2
O
THR B:374 B:374 18.0 0.129 -115.4 -138.5 0.0 0.0 0.129 A:Q9N1E2:0.129
HOH
2.825
OG1
O
1dqr 1 Q9N1E2 87.79 0.0 X-RAY
2000-02-09 THR A:374 A:374 20.0 0.143 -122.4 -142.5 0.0 0.0 0.143 B:Q9N1E2:0.143
HOH
2.963
OG1
O
THR B:374 B:374 19.0 0.136 -122.2 -143.4 0.0 0.0 0.136 A:Q9N1E2:0.136
HOH
5.404
C
O
1koj 1 Q9N1E2 87.79 0.0 X-RAY
2002-05-03 THR A:374 A:374 16.0 0.114 -119.0 -134.7 0.0 0.0 0.114 B:Q9N1E2:0.114
HOH
2.798
OG1
O
THR B:374 B:374 17.0 0.121 -123.0 -141.8 0.0 0.0 0.121 A:Q9N1E2:0.121
HOH
2.915
OG1
O
2cvp 1 P06745 84.38 0.0 X-RAY
2006-05-23 THR A:375 A:375 16.0 0.114 -111.2 -133.9 0.0 0.0 0.114 B:P06745:0.114
HOH
2.814
OG1
O
THR B:375 B:375 16.0 0.114 -113.6 -136.9 0.0 0.0 0.114 A:P06745:0.114
HOH
2.889
OG1
O
2cxn 1 P06745 84.38 0.0 X-RAY
2006-05-23 THR A:375 A:375 17.0 0.121 -112.6 -136.9 0.0 0.0 0.121 B:P06745:0.121
HOH
2.920
OG1
O
THR B:375 B:375 16.0 0.114 -115.8 -138.0 0.0 0.0 0.114 A:P06745:0.114
HOH
2.883
OG1
O
2cxo 1 P06745 84.38 0.0 X-RAY
2006-05-23 THR A:375 A:375 16.0 0.114 -113.8 -136.4 0.0 0.0 0.114 B:P06745:0.114
HOH
2.804
OG1
O
THR B:375 B:375 15.0 0.107 -116.3 -138.9 0.0 0.0 0.107 A:P06745:0.107
HOH
2.878
OG1
O
2cxp 1 P06745 84.38 0.0 X-RAY
2006-05-23 THR A:375 A:375 17.0 0.121 -112.8 -138.5 0.0 0.0 0.121 B:P06745:0.121
HOH
2.923
OG1
O
THR B:375 B:375 16.0 0.114 -113.8 -138.8 0.0 0.0 0.114 A:P06745:0.114
HOH
2.904
OG1
O
2cxq 1 P06745 84.38 0.0 X-RAY
2006-05-23 THR A:375 A:375 17.0 0.121 -112.5 -135.4 0.0 0.0 0.121 B:P06745:0.121
HOH
2.848
OG1
O
THR B:375 B:375 16.0 0.114 -115.2 -137.1 0.0 0.0 0.114 A:P06745:0.114
HOH
2.862
OG1
O
2cxr 1 P06745 84.38 0.0 X-RAY
2006-05-23 THR A:375 A:375 16.0 0.114 -114.1 -138.9 0.0 0.0 0.114 B:P06745:0.114
HOH
2.889
OG1
O
THR B:375 B:375 16.0 0.114 -114.6 -137.0 0.0 0.0 0.114 A:P06745:0.114
HOH
2.865
OG1
O
2cxs 1 P06745 84.38 0.0 X-RAY
2006-05-23 THR A:375 A:375 17.0 0.121 -113.4 -136.4 0.0 0.0 0.121 B:P06745:0.121
HOH
2.870
OG1
O
THR B:375 B:375 16.0 0.114 -116.2 -137.8 0.0 0.0 0.114 A:P06745:0.114
HOH
2.870
OG1
O
2cxt 1 P06745 84.38 0.0 X-RAY
2006-05-23 THR A:375 A:375 16.0 0.114 -112.1 -134.3 0.0 0.0 0.114 B:P06745:0.114
HOH
2.893
OG1
O
THR B:375 B:375 16.0 0.114 -116.9 -135.8 0.0 0.0 0.114 A:P06745:0.114
HOH
2.942
OG1
O
2cxu 1 P06745 84.38 0.0 X-RAY
2006-05-23 THR A:375 A:375 17.0 0.121 -110.3 -139.0 0.0 0.0 0.121 B:P06745:0.121
HOH
2.870
OG1
O
THR B:375 B:375 16.0 0.114 -115.3 -139.9 0.0 0.0 0.114 A:P06745:0.114
HOH
2.895
OG1
O
1u0e 1 P06745 84.05 0.0 X-RAY
2004-11-02 THR A:375 A:374 17.0 0.121 -113.1 -137.9 0.0 0.0 0.121 B:P06745:0.121
HOH
2.816
OG1
O
THR B:375 B:374 16.0 0.114 -117.1 -138.1 0.0 0.0 0.114 A:P06745:0.114
GOL
HOH
9.617
2.822
OG1
OG1
O1
O
1u0f 1 P06745 84.05 0.0 X-RAY
2004-11-02 THR A:375 A:374 18.0 0.129 -112.2 -136.8 0.0 0.0 0.129 B:P06745:0.129
HOH
2.811
OG1
O
THR B:375 B:374 16.0 0.114 -115.5 -137.1 0.0 0.0 0.114 A:P06745:0.114
HOH
2.876
OG1
O
1u0g 1 P06745 84.05 0.0 X-RAY
2004-11-02 THR A:375 A:374 17.0 0.121 -113.1 -137.5 0.0 0.0 0.121 B:P06745:0.121
HOH
2.892
OG1
O
THR B:375 B:374 16.0 0.114 -115.1 -135.9 0.0 0.0 0.114 A:P06745:0.114
HOH
2.924
OG1
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p06744-f1 1 P06744 94.98 0.0 THR A:375 A:375 16.0 0.114 -124.9 -135.1