Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 40325345 . A C CCDS12545.1:NM_001436.3:c.904Tat>Gat_NP_001427.2:p.302Y>D Homo sapiens fibrillarin (FBL), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
7mq8 53 P22087 100.0 0.0 EM
 2021-09-22 TYR CB:302 SC:302 51.0 0.222 T -82.4 -61.8 13.0 0.057 0.165 VB:Q9Y3A2:0.165
TYR DB:302 SD:302 65.0 0.283 T -108.7 -26.8 23.0 0.1 0.183 HA:Q9NQZ2:0.183
 G
C
C
 9.197
6.782
7.509
 OH
OH
CE1
 OP1
OP1
N4
7mq9 46 P22087 100.0 0.0 EM
 2021-09-22 TYR UA:302 SC:302 64.0 0.278 S -91.5 -32.5 29.0 0.126 0.152 HB:Q9Y3A2:0.152
TYR VA:302 SD:302 63.0 0.274 T -109.9 -33.8 13.0 0.057 0.217 EA:Q9NQZ2:0.217
 G
C
C
 9.188
6.941
7.110
 OH
OH
CE1
 OP1
OP1
N4
7mqa 51 P22087 100.0 0.0 EM
 2021-09-22 TYR ZA:302 SC:303 71.0 0.309 T -104.6 -25.9 19.0 0.083 0.226 SB:Q9Y3A2:0.165
EA:Q86WX3:0.065
TYR AB:302 SD:303 62.0 0.27 T -108.5 -26.9 23.0 0.1 0.17 HA:Q9NQZ2:0.17
 G
C
C
 9.342
6.912
7.588
 OH
OH
CE1
 O3'
OP1
N4
2ipx 1 P22087 100.0 3e-174 X-RAY
 2006-10-24 TYR A:220 A:303 55.0 0.239 T -60.6 -43.7 55.0 0.239 0.0 HOH
 2.450
 OH
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p22087-f1 1 P22087 100.0 0.0 TYR A:302 A:302 63.0 0.274 T -78.7 -45.9
af-a6nhq2-f1 1 A6NHQ2 83.33 1e-153 TYR A:314 A:314 65.0 0.283 T -71.9 -43.2