Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 40325411 . C A CCDS12545.1:NM_001436.3:c.838Gcc>Tcc_NP_001427.2:p.280A>S Homo sapiens fibrillarin (FBL), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
7mq8 53 P22087 100.0 0.0 EM
 2021-09-22 ALA CB:280 SC:280 43.0 0.374 H -69.6 -32.6 22.0 0.191 0.183 JA:Q9UMY1:0.183
ALA DB:280 SD:280 68.0 0.591 H -69.5 -35.4 7.0 0.061 0.53 LB:Q9Y324:0.53
7mq9 46 P22087 100.0 0.0 EM
 2021-09-22 ALA UA:280 SC:280 43.0 0.374 H -67.9 -28.9 25.0 0.217 0.157 FA:Q9UMY1:0.157
ALA VA:280 SD:280 65.0 0.565 H -76.0 -31.7 8.0 0.07 0.495 BB:Q9Y324:0.496
7mqa 51 P22087 100.0 0.0 EM
 2021-09-22 ALA ZA:280 SC:281 41.0 0.357 H -66.6 -34.8 30.0 0.261 0.096 IA:Q9UMY1:0.096
ALA AB:280 SD:281 67.0 0.583 H -69.1 -32.7 9.0 0.078 0.505 IB:Q9Y324:0.504
2ipx 1 P22087 100.0 3e-174 X-RAY
 2006-10-24 ALA A:198 A:281 60.0 0.522 H -61.1 -37.8 60.0 0.522 0.0 HOH
 2.729
 O
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p22087-f1 1 P22087 100.0 0.0 ALA A:280 A:280 62.0 0.539 H -61.8 -39.0
af-a6nhq2-f1 1 A6NHQ2 83.33 1e-153 ALA A:292 A:292 45.0 0.391 H -62.9 -36.6