Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 40330880 . G A CCDS12545.1:NM_001436.3:c.371tCg>tTg_NP_001427.2:p.124S>L Homo sapiens fibrillarin (FBL), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
7mq8 53 P22087 100.0 0.0 EM
 2021-09-22 SER CB:124 SC:124 77.0 0.67 E -115.6 140.9 77.0 0.67 0.0 U
U
 8.121
7.465
 OG
OG
 O3'
OP1
SER DB:124 SD:124 99.0 0.861 E -94.2 132.4 54.0 0.47 0.391 OB:Q5QJE6:0.391
7mq9 46 P22087 100.0 0.0 EM
 2021-09-22 SER UA:124 SC:124 72.0 0.626 E -111.0 142.0 72.0 0.626 0.0 U
U
U
 9.576
7.343
6.938
 N
OG
OG
 O2'
O3'
OP1
SER VA:124 SD:124 100.0 0.87 E -96.5 130.4 52.0 0.452 0.418 DB:Q5QJE6:0.417
7mqa 51 P22087 100.0 0.0 EM
 2021-09-22 SER ZA:124 SC:125 77.0 0.67 E -119.2 144.0 77.0 0.67 0.0 U
U
U
 4.537
3.573
6.650
 OG
CB
OG
 O3'
OP1
OP1
SER AB:124 SD:125 97.0 0.843 E -101.9 137.1 52.0 0.452 0.391 LB:Q5QJE6:0.391
2ipx 1 P22087 100.0 3e-174 X-RAY
 2006-10-24 SER A:42 A:125 78.0 0.678 E -108.7 137.8 78.0 0.678 0.0 HOH
 2.755
 N
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p22087-f1 1 P22087 100.0 0.0 SER A:124 A:124 96.0 0.835 E -95.0 123.8
af-a6nhq2-f1 1 A6NHQ2 83.33 1e-153 THR A:136 A:136 86.0 0.614 E -96.6 122.4