Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 40330899 . A C CCDS12545.1:NM_001436.3:c.352Tat>Gat_NP_001427.2:p.118Y>D Homo sapiens fibrillarin (FBL), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
7mq8 53 P22087 100.0 0.0 EM
 2021-09-22 TYR CB:118 SC:118 81.0 0.352 S -124.2 22.8 81.0 0.352 0.0 A
C
 7.011
5.954
 O
O
 O3'
OP1
TYR DB:118 SD:118 41.0 0.178 S -135.1 29.6 32.0 0.139 0.039 AB:O00567:0.039
 C
 8.659
 O
 O2
7mq9 46 P22087 100.0 0.0 EM
 2021-09-22 TYR UA:118 SC:118 72.0 0.313 S -130.8 32.5 72.0 0.313 0.0 A
C
G
 6.976
5.632
9.510
 C
O
O
 O3'
OP1
OP1
TYR VA:118 SD:118 38.0 0.165 S -136.2 29.0 30.0 0.13 0.035 SA:O00567:0.035
 C
 8.814
 O
 O2
7mqa 51 P22087 100.0 0.0 EM
 2021-09-22 TYR ZA:118 SC:119 80.0 0.348 S -132.8 27.1 80.0 0.348 0.0 A
C
G
 7.630
6.285
6.439
 N
C
O
 O3'
C5'
OP1
TYR AB:118 SD:119 37.0 0.161 S -135.4 31.6 31.0 0.135 0.026 XA:O00567:0.026
 C
 8.436
 O
 O2
2ipx 1 P22087 100.0 3e-174 X-RAY
 2006-10-24 TYR A:36 A:119 46.0 0.2 S -133.6 26.7 46.0 0.2 0.0 HOH
 2.846
 OH
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p22087-f1 1 P22087 100.0 0.0 TYR A:118 A:118 55.0 0.239 S -134.0 18.3
af-a6nhq2-f1 1 A6NHQ2 83.33 1e-153 TYR A:130 A:130 48.0 0.209 S -136.8 21.3