Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 40331077 . A C CCDS12545.1:NM_001436.3:c.260aTg>aGg_NP_001427.2:p.87M>R Homo sapiens fibrillarin (FBL), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
7mq8 53 P22087 100.0 0.0 EM
 2021-09-22 MET CB:87 SC:87 96.0 0.519 -116.9 135.9 96.0 0.519 0.0
MET DB:87 SD:87 101.0 0.546 E -119.0 142.6 8.0 0.043 0.503 OB:Q5QJE6:0.503
7mq9 46 P22087 100.0 0.0 EM
 2021-09-22 MET UA:87 SC:87 98.0 0.53 -117.6 137.1 98.0 0.53 0.0
MET VA:87 SD:87 112.0 0.605 E -117.1 143.3 10.0 0.054 0.551 DB:Q5QJE6:0.551
7mqa 51 P22087 100.0 0.0 EM
 2021-09-22 MET ZA:87 SC:88 94.0 0.508 E -119.2 135.8 13.0 0.07 0.438 SB:Q9Y3A2:0.416
EA:Q86WX3:0.027
MET AB:87 SD:88 96.0 0.519 E -117.1 140.5 9.0 0.049 0.47 LB:Q5QJE6:0.47
2ipx 1 P22087 100.0 3e-174 X-RAY
 2006-10-24 MSE A:5 A:88 165.0 NA 360.0 127.3 165.0 NA NA HOH
 2.665
 N
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p22087-f1 1 P22087 100.0 0.0 MET A:87 A:87 119.0 0.643 E -99.9 136.4
af-a6nhq2-f1 1 A6NHQ2 83.33 1e-153 SER A:99 A:99 35.0 0.304 E -128.9 154.6