Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 41836971 . A C CCDS33031.1:NM_000660.4:c.1159Tgc>Ggc_NP_000651.3:p.387C>G Homo sapiens transforming growth factor, beta 1 (TGFB1), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5ffo 3 P01137 99.17 0.0 X-RAY
 2017-01-25 CYS C:360 C:358 10.0 0.074 E -139.2 139.8 10.0 0.074 0.0
CYS D:360 D:358 17.0 0.126 E -136.0 138.2 17.0 0.126 0.0
CYS G:360 G:358 10.0 0.074 E -139.5 139.0 10.0 0.074 0.0
CYS H:360 H:358 17.0 0.126 E -134.2 137.4 17.0 0.126 0.0
5vqp 1 P01137 99.17 0.0 X-RAY
 2017-11-15 CYS A:360 A:358 9.0 0.067 E -106.9 169.3 9.0 0.067 0.0
6uja 3 P07200 94.18 0.0 EM
 2020-02-05 CYS C:360 NA:NA DO NA DO DO DO NA NA NA
3rjr 1 P07200 93.63 0.0 X-RAY
 2011-06-15 CYS A:360 A:358 0.0 0.0 E -135.8 145.7 0.0 0.0 0.0
CYS B:360 B:358 3.0 0.022 E -135.7 146.0 3.0 0.022 0.0
CYS C:360 C:358 0.0 0.0 E -135.7 145.9 NA NA NA
CYS D:360 D:358 1.0 0.007 E -135.7 146.1 NA NA NA
5vqf 1 P07200 93.63 0.0 X-RAY
 2017-11-15 CYS A:360 A:358 0.0 0.0 E -127.1 153.6 0.0 0.0 0.0
CYS B:360 B:358 24.0 0.178 E -128.0 153.5 24.0 0.178 0.0
CYS C:360 C:358 0.0 0.0 E -125.9 152.5 NA NA NA
CYS D:360 D:358 22.0 0.163 E -126.9 150.8 NA NA NA
1kla 1 P01137 100.0 1e-80 NMR
 1996-08-17 CYS A:109 A:109 4.0 0.03 E -106.7 160.5 4.0 0.03 0.0
CYS B:109 B:109 4.0 0.03 E -106.2 160.6 4.0 0.03 0.0
1klc 1 P01137 100.0 1e-80 NMR
 1996-08-17 CYS A:109 A:109 7.0 0.052 E -94.9 -171.5 7.0 0.052 0.0
CYS B:109 B:109 7.0 0.052 E -93.7 -165.7 7.0 0.052 0.0
1kld 1 P01137 100.0 1e-80 NMR
 1996-08-17 CYS A:109 A:109 NA NA NA NA NA 8.0 0.059 NA
CYS B:109 B:109 NA NA NA NA NA 8.0 0.059 NA
3kfd 1 P01137 100.0 1e-80 X-RAY
 2010-03-02 CYS A:109 A:109 2.0 0.015 E -119.8 177.9 2.0 0.015 0.0 HOH
 8.561
 N
 O
CYS B:109 B:109 0.0 0.0 E -126.3 174.0 0.0 0.0 0.0 HOH
 7.926
 O
 O
CYS G:109 C:109 2.0 0.015 E -116.5 173.5 NA NA NA
CYS H:109 D:109 0.0 0.0 E -124.4 172.5 NA NA NA
4kv5 1 P01137 100.0 1e-80 X-RAY
 2014-09-24 CYS A:109 C:109 0.0 0.0 E -116.0 163.9 0.0 0.0 0.0
CYS B:109 D:109 2.0 0.015 E -118.4 165.5 2.0 0.015 0.0
CYS C:109 A:109 0.0 0.0 E -117.0 167.7 NA NA NA
CYS D:109 B:109 2.0 0.015 E -119.7 165.3 NA NA NA
6gff 2 P01137 100.0 1e-80 X-RAY
 2018-11-07 CYS B:109 B:387 0.0 0.0 E -118.6 146.6 0.0 0.0 0.0
CYS D:109 D:387 25.0 0.185 E -120.1 144.3 25.0 0.185 0.0
CYS F:109 F:387 0.0 0.0 E -120.0 145.7 NA NA NA
CYS H:109 H:387 7.0 0.052 E -120.0 141.6 NA NA NA
5ty4 2 ? 81.44 6e-54 ELECTRON CRYSTALLOGRAPHY
 2017-04-26 CYS B:95 B:409 32.0 0.237 E -101.6 139.9 32.0 0.237 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p01137-f1 1 P01137 99.74 0.0 CYS A:387 A:387 16.0 0.119 E -122.8 151.5