Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 41836977 . G A CCDS33031.1:NM_000660.4:c.1153Cgc>Tgc_NP_000651.3:p.385R>C Homo sapiens transforming growth factor, beta 1 (TGFB1), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5ffo 3 P01137 99.17 0.0 X-RAY
 2017-01-25 ARG C:358 C:356 80.0 0.356 -93.8 -68.9 80.0 0.356 0.0
ARG D:358 D:356 139.0 0.618 -95.0 -69.5 139.0 0.618 0.0
ARG G:358 G:356 81.0 0.36 -92.3 -68.5 81.0 0.36 0.0
ARG H:358 H:356 140.0 0.622 -94.0 -70.9 133.0 0.591 0.031 G:P01137:0.031
5vqp 1 P01137 99.17 0.0 X-RAY
 2017-11-15 ARG A:358 A:356 73.0 0.324 E -106.2 -21.7 73.0 0.324 0.0
6uja 3 P07200 94.18 0.0 EM
 2020-02-05 ARG C:358 NA:NA DO NA DO DO DO NA NA NA
3rjr 1 P07200 93.63 0.0 X-RAY
 2011-06-15 ARG A:358 A:356 72.0 0.32 -102.9 -49.0 72.0 0.32 0.0
ARG B:358 B:356 69.0 0.307 -102.9 -49.0 69.0 0.307 0.0
ARG C:358 C:356 70.0 0.311 -103.0 -48.9 NA NA NA
ARG D:358 D:356 71.0 0.316 -103.0 -48.9 NA NA NA
5vqf 1 P07200 93.63 0.0 X-RAY
 2017-11-15 ARG A:358 A:356 63.0 0.28 -100.5 -31.7 63.0 0.28 0.0
ARG B:358 B:356 78.0 0.347 -101.4 -31.2 78.0 0.347 0.0
ARG C:358 C:356 68.0 0.302 -99.2 -31.0 NA NA NA
ARG D:358 D:356 68.0 0.302 -99.0 -31.8 NA NA NA
1kla 1 P01137 100.0 1e-80 NMR
 1996-08-17 ARG A:107 A:107 148.0 0.658 E -120.1 -17.7 148.0 0.658 0.0
ARG B:107 B:107 145.0 0.644 E -120.6 -17.9 145.0 0.644 0.0
1klc 1 P01137 100.0 1e-80 NMR
 1996-08-17 ARG A:107 A:107 164.0 0.729 E -144.2 13.3 164.0 0.729 0.0
ARG B:107 B:107 163.0 0.724 E -144.6 14.7 163.0 0.724 0.0
1kld 1 P01137 100.0 1e-80 NMR
 1996-08-17 ARG A:107 A:107 NA NA NA NA NA 156.0 0.693 NA
ARG B:107 B:107 NA NA NA NA NA 158.0 0.702 NA
3kfd 1 P01137 100.0 1e-80 X-RAY
 2010-03-02 ARG A:107 A:107 78.0 0.347 E -90.9 -49.2 78.0 0.347 0.0 HOH
 3.488
 CZ
 O
ARG B:107 B:107 90.0 0.4 E -101.3 -15.7 90.0 0.4 0.0 HOH
 8.873
 N
 O
ARG G:107 C:107 75.0 0.333 E -92.6 -52.9 NA NA NA
ARG H:107 D:107 92.0 0.409 E -108.6 -18.4 NA NA NA
4kv5 1 P01137 100.0 1e-80 X-RAY
 2014-09-24 ARG A:107 C:107 84.0 0.373 E -103.2 -20.6 84.0 0.373 0.0
ARG B:107 D:107 73.0 0.324 -104.2 -20.2 73.0 0.324 0.0
ARG C:107 A:107 73.0 0.324 E -102.1 -21.4 NA NA NA
ARG D:107 B:107 82.0 0.364 -101.2 -21.4 NA NA NA
6gff 2 P01137 100.0 1e-80 X-RAY
 2018-11-07 ARG B:107 B:385 73.0 0.324 E -103.8 -34.6 73.0 0.324 0.0
ARG D:107 D:385 155.0 0.689 E -105.4 -30.0 155.0 0.689 0.0
ARG F:107 F:385 71.0 0.316 E -105.1 -32.5 NA NA NA
ARG H:107 H:385 109.0 0.484 E -104.6 -32.3 NA NA NA
5ty4 2 ? 81.44 6e-54 ELECTRON CRYSTALLOGRAPHY
 2017-04-26 LYS B:93 B:407 73.0 0.365 -131.5 -85.1 73.0 0.365 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p01137-f1 1 P01137 99.74 0.0 ARG A:385 A:385 69.0 0.307 -94.3 -45.1