Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 41838037 . C A CCDS33031.1:NM_000660.4:c.1010aGc>aTc_NP_000651.3:p.337S>I Homo sapiens transforming growth factor, beta 1 (TGFB1), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5ffo 3 P01137 99.17 0.0 X-RAY
 2017-01-25 SER C:310 NA:NA DO NA DO DO DO NA NA NA
SER D:310 NA:NA DO NA DO DO DO NA NA NA
SER G:310 NA:NA DO NA DO DO DO NA NA NA
SER H:310 NA:NA DO NA DO DO DO NA NA NA
5vqp 1 P01137 99.17 0.0 X-RAY
 2017-11-15 SER A:310 NA:NA DO NA DO DO DO NA NA NA
6uja 3 P07200 94.18 0.0 EM
 2020-02-05 SER C:310 NA:NA DO NA DO DO DO NA NA NA
3rjr 1 P07200 93.63 0.0 X-RAY
 2011-06-15 SER A:310 A:308 111.0 0.965 H -64.7 -40.2 111.0 0.965 0.0
SER B:310 NA:NA DO NA DO DO DO NA NA NA
SER C:310 C:308 98.0 0.852 H -59.2 -41.8 NA NA NA
SER D:310 D:308 58.0 0.504 H -59.4 -35.0 NA NA NA
5vqf 1 P07200 93.63 0.0 X-RAY
 2017-11-15 SER A:310 A:308 105.0 0.913 H -64.7 -33.7 105.0 0.913 0.0
SER B:310 NA:NA DO NA DO DO DO NA NA NA
SER C:310 C:308 106.0 0.922 H -60.7 -40.1 NA NA NA
SER D:310 D:308 60.0 0.522 H -62.9 -32.4 NA NA NA
1kla 1 P01137 100.0 1e-80 NMR
 1996-08-17 SER A:59 A:59 0.0 0.0 H -70.4 -24.7 0.0 0.0 0.0
SER B:59 B:59 0.0 0.0 H -70.7 -24.0 0.0 0.0 0.0
1klc 1 P01137 100.0 1e-80 NMR
 1996-08-17 SER A:59 A:59 0.0 0.0 H -78.4 -30.5 0.0 0.0 0.0
SER B:59 B:59 0.0 0.0 H -78.2 -30.7 0.0 0.0 0.0
1kld 1 P01137 100.0 1e-80 NMR
 1996-08-17 SER A:59 A:59 NA NA NA NA NA 0.0 0.0 NA
SER B:59 B:59 NA NA NA NA NA 0.0 0.0 NA
3kfd 1 P01137 100.0 1e-80 X-RAY
 2010-03-02 SER A:59 A:59 1.0 0.009 H -65.7 -39.7 1.0 0.009 0.0 HOH
 5.763
 O
 O
SER B:59 B:59 0.0 0.0 H -61.4 -40.1 0.0 0.0 0.0 HOH
 2.773
 OG
 O
SER G:59 C:59 1.0 0.009 H -62.4 -49.1 NA NA NA
SER H:59 D:59 1.0 0.009 H -56.9 -43.5 NA NA NA
4kv5 1 P01137 100.0 1e-80 X-RAY
 2014-09-24 SER A:59 C:59 0.0 0.0 H -52.4 -48.5 0.0 0.0 0.0
SER B:59 D:59 0.0 0.0 H -53.8 -49.5 0.0 0.0 0.0
SER C:59 A:59 0.0 0.0 H -53.1 -50.0 NA NA NA
SER D:59 B:59 0.0 0.0 H -52.7 -48.7 NA NA NA
6gff 2 P01137 100.0 1e-80 X-RAY
 2018-11-07 SER B:59 B:337 85.0 NA G -62.2 -29.8 85.0 NA NA
SER D:59 D:337 81.0 0.704 G -63.5 -37.7 63.0 0.548 0.156 C:P01137:0.113
L:None:0.052
SER F:59 F:337 100.0 NA T -61.9 -37.3 NA NA NA
SER H:59 H:337 79.0 0.687 G -63.9 -36.7 NA NA NA
5ty4 2 ? 81.44 6e-54 ELECTRON CRYSTALLOGRAPHY
 2017-04-26 SER B:45 NA:NA DO NA DO DO DO NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p01137-f1 1 P01137 99.74 0.0 SER A:337 A:337 1.0 0.009 H -64.0 -34.1