Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 41838184 . G A CCDS33031.1:NM_000660.4:c.863tCc>tTc_NP_000651.3:p.288S>F Homo sapiens transforming growth factor, beta 1 (TGFB1), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5ffo 3 P01137 99.17 0.0 X-RAY
 2017-01-25 SER C:261 C:259 38.0 0.33 S -131.9 159.3 38.0 0.33 0.0
SER D:261 D:259 25.0 0.217 -129.3 141.8 25.0 0.217 0.0
SER G:261 G:259 37.0 0.322 S -131.8 159.1 34.0 0.296 0.026 A:P06756:0.026
SER H:261 H:259 140.0 1.0 360.0 -23.8 140.0 1.0 0.0
5vqp 1 P01137 99.17 0.0 X-RAY
 2017-11-15 SER A:261 A:259 33.0 0.287 H -75.7 -28.2 33.0 0.287 0.0
6uja 3 P07200 94.18 0.0 EM
 2020-02-05 SER C:261 NA:NA DO NA DO DO DO NA NA NA
3rjr 1 P07200 93.63 0.0 X-RAY
 2011-06-15 SER A:261 A:259 45.0 0.391 S -137.1 157.0 45.0 0.391 0.0
SER B:261 B:259 44.0 0.383 S -134.7 156.8 44.0 0.383 0.0
SER C:261 C:259 47.0 0.409 S -146.6 155.3 NA NA NA
SER D:261 D:259 36.0 0.313 S -104.5 149.3 NA NA NA
5vqf 1 P07200 93.63 0.0 X-RAY
 2017-11-15 SER A:261 A:259 38.0 0.33 S -110.4 146.8 38.0 0.33 0.0
SER B:261 B:259 58.0 0.504 S -110.2 146.0 58.0 0.504 0.0
SER C:261 C:259 47.0 0.409 S -113.2 149.9 NA NA NA
SER D:261 D:259 59.0 0.513 S -111.5 145.4 NA NA NA
1kla 1 P01137 100.0 1e-80 NMR
 1996-08-17 SER A:10 A:10 88.0 0.765 S -139.7 -160.4 88.0 0.765 0.0
SER B:10 B:10 87.0 0.757 S -140.6 -160.6 87.0 0.757 0.0
1klc 1 P01137 100.0 1e-80 NMR
 1996-08-17 SER A:10 A:10 96.0 0.835 S -83.2 -158.6 96.0 0.835 0.0
SER B:10 B:10 97.0 0.843 S -83.2 -158.7 97.0 0.843 0.0
1kld 1 P01137 100.0 1e-80 NMR
 1996-08-17 SER A:10 A:10 NA NA NA NA NA 120.0 1.0 NA
SER B:10 B:10 NA NA NA NA NA 121.0 1.0 NA
3kfd 1 P01137 100.0 1e-80 X-RAY
 2010-03-02 SER A:10 A:10 41.0 0.357 S -112.4 -174.6 41.0 0.357 0.0 HOH
 3.078
 CB
 O
SER B:10 B:10 53.0 0.461 S -116.7 -152.4 53.0 0.461 0.0
SER G:10 C:10 43.0 0.374 S -114.7 -170.0 NA NA NA
SER H:10 D:10 54.0 0.47 S -117.4 -152.1 NA NA NA
4kv5 1 P01137 100.0 1e-80 X-RAY
 2014-09-24 SER A:10 C:10 51.0 0.443 S -154.0 169.5 51.0 0.443 0.0
SER B:10 D:10 60.0 0.522 S -153.8 170.5 60.0 0.522 0.0
SER C:10 A:10 54.0 0.47 S -151.9 170.8 NA NA NA
SER D:10 B:10 57.0 0.496 S -151.9 171.0 NA NA NA
6gff 2 P01137 100.0 1e-80 X-RAY
 2018-11-07 SER B:10 B:288 51.0 0.443 -122.9 138.1 51.0 0.443 0.0
SER D:10 D:288 42.0 NA -174.7 138.0 38.0 NA NA A:P01137:NA
L:None:NA
SER F:10 F:288 41.0 0.357 S -121.4 133.1 NA NA NA
SER H:10 H:288 87.0 NA S -62.4 137.5 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p01137-f1 1 P01137 99.74 0.0 SER A:288 A:288 114.0 0.991 T -66.3 -20.1