Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 42471403 . C A CCDS12594.1:NM_152296.4:c.3011gGg>gTg_NP_689509.1:p.1004G>V Homo sapiens ATPase Na+/K+ transporting subunit alpha 3 (ATP1A3), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3wgu 1 I7HD36 88.01 0.0 X-RAY
 2013-10-09 GLY A:1007 A:1007 48.0 0.64 T 78.8 -6.6 48.0 0.64 0.0
GLY D:1007 C:1007 36.0 0.48 T 100.6 -22.9 NA NA NA
3wgv 1 I7HD36 88.01 0.0 X-RAY
 2013-10-09 GLY A:1007 A:1007 46.0 0.613 T 77.3 -7.0 46.0 0.613 0.0
GLY D:1007 C:1007 38.0 0.507 T 92.9 -19.7 NA NA NA
4xe5 1 Q08DA1 87.61 0.0 X-RAY
 2016-03-09 GLY A:1012 A:1012 63.0 0.84 S -69.3 -61.6 63.0 0.84 0.0
4hqj 1 P05024 87.51 0.0 X-RAY
 2013-10-02 GLY A:1012 A:1007 60.0 0.8 S -52.4 -45.5 60.0 0.8 0.0
GLY D:1012 C:1007 59.0 0.787 S -51.5 -45.2 NA NA NA
4hyt 1 P05024 87.51 0.0 X-RAY
 2013-06-26 GLY A:1012 A:1007 63.0 0.84 S -69.0 -62.0 63.0 0.84 0.0 CE1
 4.648
 CA
 O28
GLY D:1012 C:1007 64.0 0.853 S -69.1 -61.9 NA NA NA
4res 1 P05024 87.51 0.0 X-RAY
 2015-01-28 GLY A:1012 A:1007 61.0 0.813 S -70.8 -60.6 61.0 0.813 0.0
GLY D:1012 C:1007 63.0 0.84 S -71.0 -59.9 NA NA NA
4ret 1 P05024 87.51 0.0 X-RAY
 2015-01-28 GLY A:1012 A:1007 65.0 0.867 S -69.7 -62.2 65.0 0.867 0.0
GLY D:1012 C:1007 64.0 0.853 S -69.7 -62.2 NA NA NA
7evx 1 P05024 87.51 0.0 X-RAY
 2021-07-07 GLY A:1012 A:1007 53.0 0.707 S -80.7 -86.7 53.0 0.707 0.0
GLY D:1012 C:1007 46.0 0.613 S -92.6 -101.0 NA NA NA
7d91 1 P05024 87.51 0.0 X-RAY
 2021-01-27 GLY A:1007 A:1007 50.0 0.667 S -96.1 -102.4 50.0 0.667 0.0 PCW
PCW
 8.049
5.129
 N
CA
 C6
O2P
7d92 1 P05024 87.51 0.0 X-RAY
 2021-01-27 GLY A:1007 A:1007 50.0 0.667 S -96.9 -101.9 50.0 0.667 0.0 PCW
PCW
 9.185
5.559
 N
CA
 O2P
O2P
7d93 1 P05024 87.51 0.0 X-RAY
 2021-01-27 GLY A:1007 A:1007 49.0 0.653 S -71.8 -85.0 49.0 0.653 0.0 PCW
 4.768
 CA
 C6
GLY C:1007 C:1007 55.0 0.733 S -74.1 -85.5 NA NA NA
7d94 1 P05024 87.51 0.0 X-RAY
 2021-01-27 GLY A:1007 A:1007 55.0 0.733 S -71.6 -85.6 55.0 0.733 0.0
GLY D:1007 C:1007 54.0 0.72 S -71.9 -85.7 NA NA NA
7ddf 1 P05024 87.51 0.0 X-RAY
 2021-01-27 GLY A:1007 A:1007 58.0 0.773 S -70.6 -83.9 58.0 0.773 0.0
GLY D:1007 C:1007 55.0 0.733 S -73.4 -85.0 NA NA NA
7ddh 1 P05024 87.51 0.0 X-RAY
 2021-01-27 GLY A:1007 A:1007 63.0 0.84 S -57.8 -66.1 63.0 0.84 0.0
GLY D:1007 C:1007 66.0 0.88 S -58.7 -65.0 NA NA NA
7ddi 1 P05024 87.51 0.0 X-RAY
 2021-01-27 GLY A:1007 A:1007 43.0 0.573 S -95.9 -107.1 43.0 0.573 0.0
GLY D:1007 C:1007 46.0 0.613 S -96.6 -107.7 NA NA NA
7ddj 1 P05024 87.51 0.0 X-RAY
 2021-01-27 GLY A:1007 A:1007 58.0 0.773 S -70.8 -84.5 58.0 0.773 0.0 PCW
 6.023
 C
 O2P
GLY D:1007 C:1007 52.0 0.693 S -72.3 -85.8 NA NA NA
7ddk 1 P05024 87.51 0.0 X-RAY
 2021-01-27 GLY A:1007 A:1007 55.0 0.733 S -76.0 -77.4 55.0 0.733 0.0
GLY D:1007 C:1007 56.0 0.747 S -76.4 -77.5 NA NA NA
7ddl 1 P05024 87.51 0.0 X-RAY
 2021-01-27 GLY A:1007 A:1007 56.0 0.747 S -74.6 -83.6 56.0 0.747 0.0
GLY D:1007 C:1007 55.0 0.733 S -74.4 -83.6 NA NA NA
3b8e 1 P05024 87.58 0.0 X-RAY
 2007-12-18 GLY A:989 A:1007 63.0 0.84 S -57.6 -21.5 63.0 0.84 0.0
GLY D:989 C:1007 54.0 0.72 T -85.3 44.2 NA NA NA
3kdp 1 P05024 87.58 0.0 X-RAY
 2010-02-16 GLY A:989 A:1007 62.0 0.827 S -103.7 -8.8 62.0 0.827 0.0
GLY D:989 C:1007 63.0 0.84 S -105.8 -9.8 NA NA NA
3n23 1 P05024 87.8 0.0 X-RAY
 2011-01-19 GLY A:983 A:1007 42.0 0.56 S -83.4 -98.7 42.0 0.56 0.0
GLY D:983 C:1007 42.0 0.56 S -83.3 -98.7 NA NA NA
2zxe 1 Q4H132 85.56 0.0 X-RAY
 2009-05-19 GLY A:1019 A:1014 73.0 0.973 T -36.8 -77.5 73.0 0.973 0.0 HOH
 5.545
 C
 O
3a3y 1 Q4H132 85.56 0.0 X-RAY
 2009-09-08 GLY A:1019 A:1014 63.0 0.84 S -36.7 -75.0 63.0 0.84 0.0
5avq 1 Q4H132 85.56 0.0 X-RAY
 2015-09-02 GLY A:1019 A:1014 73.0 0.973 T -36.8 -77.5 73.0 0.973 0.0
5avr 1 Q4H132 85.56 0.0 X-RAY
 2015-09-02 GLY A:1019 A:1014 73.0 0.973 T -36.8 -77.5 73.0 0.973 0.0
5avs 1 Q4H132 85.56 0.0 X-RAY
 2015-09-02 GLY A:1019 A:1014 73.0 0.973 T -36.7 -77.5 73.0 0.973 0.0
5avt 1 Q4H132 85.56 0.0 X-RAY
 2015-09-02 GLY A:1019 A:1014 73.0 0.973 T -36.8 -77.5 73.0 0.973 0.0
5avu 1 Q4H132 85.56 0.0 X-RAY
 2015-09-02 GLY A:1019 A:1014 73.0 0.973 T -36.8 -77.5 73.0 0.973 0.0
5avv 1 Q4H132 85.56 0.0 X-RAY
 2015-09-02 GLY A:1019 A:1014 74.0 0.987 T -36.8 -77.5 74.0 0.987 0.0
5avw 1 Q4H132 85.56 0.0 X-RAY
 2015-09-02 GLY A:1019 A:1014 73.0 0.973 T -36.9 -77.5 73.0 0.973 0.0
5avx 1 Q4H132 85.56 0.0 X-RAY
 2015-09-02 GLY A:1019 A:1014 74.0 0.987 T -36.8 -77.4 74.0 0.987 0.0
5avy 1 Q4H132 85.56 0.0 X-RAY
 2015-09-02 GLY A:1019 A:1014 74.0 0.987 T -36.8 -77.5 74.0 0.987 0.0
5avz 1 Q4H132 85.56 0.0 X-RAY
 2015-09-02 GLY A:1019 A:1014 73.0 0.973 T -36.8 -77.4 73.0 0.973 0.0
5aw0 1 Q4H132 85.56 0.0 X-RAY
 2015-09-02 GLY A:1019 A:1014 73.0 0.973 T -36.8 -77.4 73.0 0.973 0.0
5aw1 1 Q4H132 85.56 0.0 X-RAY
 2015-09-02 GLY A:1019 A:1014 73.0 0.973 T -36.8 -77.4 73.0 0.973 0.0
5aw2 1 Q4H132 85.56 0.0 X-RAY
 2015-09-02 GLY A:1019 A:1014 73.0 0.973 T -36.9 -77.4 73.0 0.973 0.0
5aw3 1 Q4H132 85.56 0.0 X-RAY
 2015-09-02 GLY A:1019 A:1014 73.0 0.973 T -36.7 -77.5 73.0 0.973 0.0
5aw4 1 Q4H132 85.56 0.0 X-RAY
 2015-09-02 GLY A:1019 A:1014 73.0 0.973 T -36.8 -77.4 73.0 0.973 0.0
5aw5 1 Q4H132 85.56 0.0 X-RAY
 2015-09-02 GLY A:1019 A:1014 73.0 0.973 T -36.8 -77.4 73.0 0.973 0.0
5aw6 1 Q4H132 85.56 0.0 X-RAY
 2015-09-02 GLY A:1019 A:1014 73.0 0.973 T -36.7 -77.5 73.0 0.973 0.0
5aw7 1 Q4H132 85.56 0.0 X-RAY
 2015-09-02 GLY A:1019 A:1014 73.0 0.973 T -36.8 -77.5 73.0 0.973 0.0
5aw8 1 Q4H132 85.56 0.0 X-RAY
 2015-09-02 GLY A:1019 A:1014 73.0 0.973 T -36.8 -77.3 73.0 0.973 0.0
5aw9 1 Q4H132 85.56 0.0 X-RAY
 2015-09-02 GLY A:1019 A:1014 74.0 0.987 S -31.6 -77.8 74.0 0.987 0.0 HOH
 5.576
 C
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p13637-f1 1 P13637 100.0 0.0 GLY A:1004 A:1004 47.0 0.627 T 81.9 -1.7
af-p50993-f1 1 P50993 88.81 0.0 GLY A:1011 A:1011 46.0 0.613 T 79.5 0.7
af-p05023-f1 1 P05023 88.03 0.0 GLY A:1014 A:1014 48.0 0.64 T 79.5 0.7