Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr19 | 42473723 | . | T | A | CCDS12594.1:NM_152296.4:c.2552cAg>cTg_NP_689509.1:p.851Q>L | Homo sapiens ATPase Na+/K+ transporting subunit alpha 3 (ATP1A3), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
3wgu | 1 | I7HD36 | 88.01 | 0.0 |
X-RAY |
2013-10-09 | GLN | A:854 | A:854 | 0.0 | 0.0 | H | -51.8 | -45.4 | 0.0 | 0.0 | 0.0 |
NA NA |
8.318 4.577 |
OE1 OE1 |
NA NA |
||
GLN | D:854 | C:854 | 0.0 | 0.0 | H | -55.5 | -38.5 | NA | NA | NA | |||||||||||||
3wgv | 1 | I7HD36 | 88.01 | 0.0 |
X-RAY |
2013-10-09 | GLN | A:854 | A:854 | 0.0 | 0.0 | H | -52.3 | -38.4 | 0.0 | 0.0 | 0.0 |
NA NA |
8.367 4.790 |
OE1 OE1 |
NA NA |
||
GLN | D:854 | C:854 | 0.0 | 0.0 | H | -63.7 | -27.9 | NA | NA | NA | |||||||||||||
4xe5 | 1 | Q08DA1 | 87.61 | 0.0 |
X-RAY |
2016-03-09 | GLN | A:859 | A:859 | 0.0 | 0.0 | H | -59.1 | -45.8 | 0.0 | 0.0 | 0.0 |
MG HOH |
9.476 8.500 |
OE1 OE1 |
MG O |
||
4hqj | 1 | P05024 | 87.51 | 0.0 |
X-RAY |
2013-10-02 | GLN | A:859 | A:854 | 1.0 | 0.006 | H | -52.7 | -38.0 | 1.0 | 0.006 | 0.0 |
NA NA |
9.207 2.431 |
OE1 OE1 |
NA NA |
||
GLN | D:859 | C:854 | 1.0 | 0.006 | H | -52.9 | -37.5 | NA | NA | NA | |||||||||||||
4hyt | 1 | P05024 | 87.51 | 0.0 |
X-RAY |
2013-06-26 | GLN | A:859 | A:854 | 0.0 | 0.0 | H | -57.1 | -54.9 | 0.0 | 0.0 | 0.0 |
MG HOH |
9.403 8.340 |
OE1 OE1 |
MG O |
||
GLN | D:859 | C:854 | 0.0 | 0.0 | H | -56.5 | -55.2 | NA | NA | NA | |||||||||||||
4res | 1 | P05024 | 87.51 | 0.0 |
X-RAY |
2015-01-28 | GLN | A:859 | A:854 | 0.0 | 0.0 | H | -62.2 | -48.1 | 0.0 | 0.0 | 0.0 |
K |
8.749 |
OE1 |
K |
||
GLN | D:859 | C:854 | 0.0 | 0.0 | H | -64.3 | -48.0 | NA | NA | NA | |||||||||||||
4ret | 1 | P05024 | 87.51 | 0.0 |
X-RAY |
2015-01-28 | GLN | A:859 | A:854 | 0.0 | 0.0 | H | -55.3 | -52.7 | 0.0 | 0.0 | 0.0 |
MG HOH |
9.449 8.496 |
OE1 OE1 |
MG O |
||
GLN | D:859 | C:854 | 0.0 | 0.0 | H | -54.7 | -53.4 | NA | NA | NA | |||||||||||||
7evx | 1 | P05024 | 87.51 | 0.0 |
X-RAY |
2021-07-07 | GLN | A:859 | A:854 | 0.0 | 0.0 | H | -64.0 | -38.1 | 0.0 | 0.0 | 0.0 |
MG HOH |
9.781 9.036 |
OE1 OE1 |
MG O |
||
GLN | D:859 | C:854 | 0.0 | 0.0 | H | -63.5 | -38.6 | NA | NA | NA | |||||||||||||
7d91 | 1 | P05024 | 87.51 | 0.0 |
X-RAY |
2021-01-27 | GLN | A:854 | A:854 | 0.0 | 0.0 | H | -63.9 | -38.2 | 0.0 | 0.0 | 0.0 | ||||||
7d92 | 1 | P05024 | 87.51 | 0.0 |
X-RAY |
2021-01-27 | GLN | A:854 | A:854 | 0.0 | 0.0 | H | -62.5 | -40.7 | 0.0 | 0.0 | 0.0 |
HOH |
8.886 |
OE1 |
O |
||
7d93 | 1 | P05024 | 87.51 | 0.0 |
X-RAY |
2021-01-27 | GLN | A:854 | A:854 | 0.0 | 0.0 | H | -62.9 | -36.8 | 0.0 | 0.0 | 0.0 |
HOH |
9.271 |
OE1 |
O |
||
GLN | C:854 | C:854 | 0.0 | 0.0 | H | -62.2 | -37.7 | NA | NA | NA | |||||||||||||
7d94 | 1 | P05024 | 87.51 | 0.0 |
X-RAY |
2021-01-27 | GLN | A:854 | A:854 | 0.0 | 0.0 | H | -62.5 | -37.1 | 0.0 | 0.0 | 0.0 |
RB |
8.461 |
OE1 |
RB |
||
GLN | D:854 | C:854 | 0.0 | 0.0 | H | -61.6 | -37.3 | NA | NA | NA | |||||||||||||
7ddf | 1 | P05024 | 87.51 | 0.0 |
X-RAY |
2021-01-27 | GLN | A:854 | A:854 | 0.0 | 0.0 | H | -67.5 | -39.1 | 0.0 | 0.0 | 0.0 |
HOH |
9.112 |
OE1 |
O |
||
GLN | D:854 | C:854 | 0.0 | 0.0 | H | -65.9 | -39.3 | NA | NA | NA | |||||||||||||
7ddh | 1 | P05024 | 87.51 | 0.0 |
X-RAY |
2021-01-27 | GLN | A:854 | A:854 | 0.0 | 0.0 | H | -64.4 | -39.7 | 0.0 | 0.0 | 0.0 |
HOH |
9.596 |
OE1 |
O |
||
GLN | D:854 | C:854 | 0.0 | 0.0 | H | -64.1 | -38.6 | NA | NA | NA | |||||||||||||
7ddi | 1 | P05024 | 87.51 | 0.0 |
X-RAY |
2021-01-27 | GLN | A:854 | A:854 | 0.0 | 0.0 | H | -62.4 | -42.1 | 0.0 | 0.0 | 0.0 |
HOH |
9.360 |
OE1 |
O |
||
GLN | D:854 | C:854 | 0.0 | 0.0 | H | -62.2 | -42.3 | NA | NA | NA | |||||||||||||
7ddj | 1 | P05024 | 87.51 | 0.0 |
X-RAY |
2021-01-27 | GLN | A:854 | A:854 | 0.0 | 0.0 | H | -62.5 | -37.2 | 0.0 | 0.0 | 0.0 |
HOH |
9.439 |
OE1 |
O |
||
GLN | D:854 | C:854 | 0.0 | 0.0 | H | -61.7 | -37.5 | NA | NA | NA | |||||||||||||
7ddk | 1 | P05024 | 87.51 | 0.0 |
X-RAY |
2021-01-27 | GLN | A:854 | A:854 | 0.0 | 0.0 | H | -62.6 | -41.0 | 0.0 | 0.0 | 0.0 |
HOH |
9.210 |
OE1 |
O |
||
GLN | D:854 | C:854 | 0.0 | 0.0 | H | -62.7 | -41.1 | NA | NA | NA | |||||||||||||
7ddl | 1 | P05024 | 87.51 | 0.0 |
X-RAY |
2021-01-27 | GLN | A:854 | A:854 | 0.0 | 0.0 | H | -63.2 | -37.8 | 0.0 | 0.0 | 0.0 |
HOH |
9.506 |
OE1 |
O |
||
GLN | D:854 | C:854 | 0.0 | 0.0 | H | -62.3 | -37.7 | NA | NA | NA | |||||||||||||
3b8e | 1 | P05024 | 87.58 | 0.0 |
X-RAY |
2007-12-18 | GLN | A:836 | A:854 | 1.0 | 0.006 | H | -67.4 | -47.5 | 1.0 | 0.006 | 0.0 |
RB |
8.257 |
NE2 |
RB |
||
GLN | D:836 | C:854 | 2.0 | 0.011 | H | -81.3 | -21.8 | NA | NA | NA | |||||||||||||
3kdp | 1 | P05024 | 87.58 | 0.0 |
X-RAY |
2010-02-16 | GLN | A:836 | A:854 | 0.0 | 0.0 | H | -69.2 | -26.2 | 0.0 | 0.0 | 0.0 |
RB |
7.394 |
OE1 |
RB |
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GLN | D:836 | C:854 | 0.0 | 0.0 | H | -67.8 | -25.7 | NA | NA | NA | |||||||||||||
3n23 | 1 | P05024 | 87.8 | 0.0 |
X-RAY |
2011-01-19 | GLN | A:830 | A:854 | 0.0 | 0.0 | H | -74.4 | -27.1 | 0.0 | 0.0 | 0.0 | ||||||
GLN | D:830 | C:854 | 0.0 | 0.0 | H | -72.7 | -27.5 | NA | NA | NA | |||||||||||||
2zxe | 1 | Q4H132 | 85.56 | 0.0 |
X-RAY |
2009-05-19 | GLN | A:866 | A:861 | 0.0 | 0.0 | H | -66.4 | -41.6 | 0.0 | 0.0 | 0.0 |
K HOH |
7.749 8.031 |
OE1 OE1 |
K O |
||
3a3y | 1 | Q4H132 | 85.56 | 0.0 |
X-RAY |
2009-09-08 | GLN | A:866 | A:861 | 0.0 | 0.0 | H | -65.8 | -37.7 | 0.0 | 0.0 | 0.0 |
K HOH |
7.842 7.950 |
OE1 NE2 |
K O |
||
5avq | 1 | Q4H132 | 85.56 | 0.0 |
X-RAY |
2015-09-02 | GLN | A:866 | A:861 | 0.0 | 0.0 | H | -66.4 | -41.6 | 0.0 | 0.0 | 0.0 |
K TL HOH |
7.748 7.748 8.454 |
OE1 OE1 OE1 |
K TL O |
||
5avr | 1 | Q4H132 | 85.56 | 0.0 |
X-RAY |
2015-09-02 | GLN | A:866 | A:861 | 0.0 | 0.0 | H | -66.3 | -41.6 | 0.0 | 0.0 | 0.0 |
K TL HOH |
7.749 7.749 8.455 |
OE1 OE1 OE1 |
K TL O |
||
5avs | 1 | Q4H132 | 85.56 | 0.0 |
X-RAY |
2015-09-02 | GLN | A:866 | A:861 | 0.0 | 0.0 | H | -66.3 | -41.7 | 0.0 | 0.0 | 0.0 |
K TL HOH |
7.749 7.749 8.455 |
OE1 OE1 OE1 |
K TL O |
||
5avt | 1 | Q4H132 | 85.56 | 0.0 |
X-RAY |
2015-09-02 | GLN | A:866 | A:861 | 0.0 | 0.0 | H | -66.3 | -41.5 | 0.0 | 0.0 | 0.0 |
K TL HOH |
7.748 7.748 8.455 |
OE1 OE1 OE1 |
K TL O |
||
5avu | 1 | Q4H132 | 85.56 | 0.0 |
X-RAY |
2015-09-02 | GLN | A:866 | A:861 | 0.0 | 0.0 | H | -66.4 | -41.6 | 0.0 | 0.0 | 0.0 |
K TL HOH |
7.749 7.749 8.455 |
OE1 OE1 OE1 |
K TL O |
||
5avv | 1 | Q4H132 | 85.56 | 0.0 |
X-RAY |
2015-09-02 | GLN | A:866 | A:861 | 0.0 | 0.0 | H | -66.4 | -41.6 | 0.0 | 0.0 | 0.0 |
TL HOH |
7.750 8.455 |
OE1 OE1 |
TL O |
||
5avw | 1 | Q4H132 | 85.56 | 0.0 |
X-RAY |
2015-09-02 | GLN | A:866 | A:861 | 0.0 | 0.0 | H | -66.3 | -41.6 | 0.0 | 0.0 | 0.0 |
TL HOH |
7.749 8.456 |
OE1 OE1 |
TL O |
||
5avx | 1 | Q4H132 | 85.56 | 0.0 |
X-RAY |
2015-09-02 | GLN | A:866 | A:861 | 0.0 | 0.0 | H | -66.3 | -41.5 | 0.0 | 0.0 | 0.0 |
TL HOH |
7.748 8.454 |
OE1 OE1 |
TL O |
||
5avy | 1 | Q4H132 | 85.56 | 0.0 |
X-RAY |
2015-09-02 | GLN | A:866 | A:861 | 0.0 | 0.0 | H | -66.4 | -41.6 | 0.0 | 0.0 | 0.0 |
TL HOH |
7.748 8.454 |
OE1 OE1 |
TL O |
||
5avz | 1 | Q4H132 | 85.56 | 0.0 |
X-RAY |
2015-09-02 | GLN | A:866 | A:861 | 0.0 | 0.0 | H | -66.4 | -41.5 | 0.0 | 0.0 | 0.0 |
TL HOH |
7.748 8.454 |
OE1 OE1 |
TL O |
||
5aw0 | 1 | Q4H132 | 85.56 | 0.0 |
X-RAY |
2015-09-02 | GLN | A:866 | A:861 | 0.0 | 0.0 | H | -66.4 | -41.6 | 0.0 | 0.0 | 0.0 |
TL HOH |
7.749 8.455 |
OE1 OE1 |
TL O |
||
5aw1 | 1 | Q4H132 | 85.56 | 0.0 |
X-RAY |
2015-09-02 | GLN | A:866 | A:861 | 0.0 | 0.0 | H | -66.4 | -41.5 | 0.0 | 0.0 | 0.0 |
K TL HOH |
7.748 7.748 8.454 |
OE1 OE1 OE1 |
K TL O |
||
5aw2 | 1 | Q4H132 | 85.56 | 0.0 |
X-RAY |
2015-09-02 | GLN | A:866 | A:861 | 0.0 | 0.0 | H | -66.4 | -41.5 | 0.0 | 0.0 | 0.0 |
TL HOH |
7.749 8.455 |
OE1 OE1 |
TL O |
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5aw3 | 1 | Q4H132 | 85.56 | 0.0 |
X-RAY |
2015-09-02 | GLN | A:866 | A:861 | 0.0 | 0.0 | H | -66.3 | -41.6 | 0.0 | 0.0 | 0.0 |
TL HOH |
7.749 8.455 |
OE1 OE1 |
TL O |
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5aw4 | 1 | Q4H132 | 85.56 | 0.0 |
X-RAY |
2015-09-02 | GLN | A:866 | A:861 | 0.0 | 0.0 | H | -66.5 | -41.5 | 0.0 | 0.0 | 0.0 |
K RB HOH |
7.750 7.750 8.456 |
OE1 OE1 OE1 |
K RB O |
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5aw5 | 1 | Q4H132 | 85.56 | 0.0 |
X-RAY |
2015-09-02 | GLN | A:866 | A:861 | 0.0 | 0.0 | H | -66.3 | -41.6 | 0.0 | 0.0 | 0.0 |
K RB HOH |
7.750 7.750 8.457 |
OE1 OE1 OE1 |
K RB O |
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5aw6 | 1 | Q4H132 | 85.56 | 0.0 |
X-RAY |
2015-09-02 | GLN | A:866 | A:861 | 0.0 | 0.0 | H | -66.4 | -41.6 | 0.0 | 0.0 | 0.0 |
K RB HOH |
7.749 7.749 8.456 |
OE1 OE1 OE1 |
K RB O |
||
5aw7 | 1 | Q4H132 | 85.56 | 0.0 |
X-RAY |
2015-09-02 | GLN | A:866 | A:861 | 0.0 | 0.0 | H | -66.3 | -41.5 | 0.0 | 0.0 | 0.0 |
K RB HOH |
7.749 7.749 8.456 |
OE1 OE1 OE1 |
K RB O |
||
5aw8 | 1 | Q4H132 | 85.56 | 0.0 |
X-RAY |
2015-09-02 | GLN | A:866 | A:861 | 0.0 | 0.0 | H | -66.4 | -41.5 | 0.0 | 0.0 | 0.0 |
RB HOH |
7.749 8.456 |
OE1 OE1 |
RB O |
||
5aw9 | 1 | Q4H132 | 85.56 | 0.0 |
X-RAY |
2015-09-02 | GLN | A:866 | A:861 | 0.0 | 0.0 | H | -61.5 | -40.6 | 0.0 | 0.0 | 0.0 |
K HOH |
7.764 7.992 |
OE1 OE1 |
K O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p13637-f1 | 1 | P13637 | 100.0 | 0.0 | GLN | A:851 | A:851 | 1.0 | 0.006 | H | -61.4 | -46.6 | |
af-p50993-f1 | 1 | P50993 | 88.81 | 0.0 | GLN | A:858 | A:858 | 1.0 | 0.006 | H | -61.6 | -46.8 | |
af-p05023-f1 | 1 | P05023 | 88.03 | 0.0 | GLN | A:861 | A:861 | 1.0 | 0.006 | H | -61.5 | -47.3 |