Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 44171766 . G A CCDS33041.1:NM_001005376.2:c.133Ctc>Ttc_NP_001005376.1:p.45L>F Homo sapiens plasminogen activator, urokinase receptor (PLAUR), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1ywh 1 Q9UMV0 99.68 0.0 X-RAY
 2005-05-10 LEU A:23 A:23 30.0 0.176 E -137.9 150.9 30.0 0.176 0.0 NAG
SO4
HOH
 8.353
8.817
3.936
 CD2
CD1
CD1
 N2
O2
O
LEU C:23 C:23 30.0 0.176 E -149.0 147.2 30.0 0.176 0.0 NAG
SO4
HOH
 8.712
8.392
3.351
 CD2
CD1
CD2
 N2
O4
O
LEU E:23 E:23 27.0 0.159 E -151.2 146.2 27.0 0.159 0.0 NAG
SO4
HOH
 8.905
8.365
3.976
 CD2
CD1
CD1
 N2
O1
O
LEU G:23 G:23 30.0 0.176 E -132.6 152.7 30.0 0.176 0.0 NAG
SO4
HOH
 8.160
8.603
4.235
 CD2
CD1
CD1
 C8
O3
O
LEU I:23 I:23 28.0 0.165 E -142.1 149.8 28.0 0.165 0.0 NAG
SO4
HOH
 8.247
8.884
5.394
 CD2
CD1
CD2
 N2
O1
O
LEU K:23 K:23 24.0 0.141 E -144.5 148.3 24.0 0.141 0.0 NAG
SO4
HOH
 7.676
8.552
3.750
 CD2
CD1
CD2
 C8
O3
O
LEU M:23 M:23 29.0 0.171 E -139.1 150.0 29.0 0.171 0.0 NAG
SO4
HOH
 8.313
8.645
3.771
 CD2
CD1
CD2
 N2
O4
O
LEU O:23 O:23 27.0 0.159 E -141.4 152.6 27.0 0.159 0.0 NAG
SO4
HOH
 8.669
8.634
5.905
 CD2
CD1
CD2
 N2
O3
O
4qti 3 Q03405 100.0 0.0 X-RAY
 2015-02-25 LEU C:23 U:23 31.0 0.182 E -142.1 142.0 31.0 0.182 0.0
3bt1 3 Q03405 100.0 0.0 X-RAY
 2008-03-25 LEU C:25 U:23 24.0 0.141 E -146.2 146.8 24.0 0.141 0.0 NAG
 8.997
 CD2
 C6
3bt2 5 Q03405 100.0 0.0 X-RAY
 2008-03-25 LEU E:25 U:23 27.0 0.159 E -131.7 164.6 27.0 0.159 0.0 NAG
 6.260
 CD2
 C8
4k24 5 Q03405 100.0 0.0 X-RAY
 2014-02-26 LEU E:25 U:23 23.0 0.135 E -94.8 123.4 23.0 0.135 0.0 NAG
 7.499
 CD1
 C8
3u73 1 Q03405 99.29 0.0 X-RAY
 2012-04-18 LEU A:23 U:23 23.0 0.135 E -153.6 141.9 23.0 0.135 0.0 NAG
 5.913
 CD1
 C8
3u74 1 Q03405 99.29 0.0 X-RAY
 2012-04-18 LEU A:23 U:23 24.0 0.141 E -124.5 155.7 24.0 0.141 0.0 NAG
HOH
 6.057
7.192
 CD2
O
 C8
O
7e17 1 Q03405 100.0 0.0 X-RAY
 2021-12-22 LEU A:25 A:23 73.0 0.429 E -130.2 137.2 31.0 0.182 0.247 B:Q03405:0.247
LEU B:25 B:23 74.0 0.435 E -134.4 139.8 25.0 0.147 0.288 A:Q03405:0.288
7v63 1 Q03405 100.0 0.0 X-RAY
 2021-12-22 LEU A:25 A:23 78.0 0.459 E -133.4 144.9 78.0 0.459 0.0
LEU B:25 B:23 80.0 0.471 E -134.0 143.0 80.0 0.471 0.0
2fd6 4 Q03405 100.0 0.0 X-RAY
 2006-02-21 LEU D:24 U:23 26.0 0.153 E -143.0 149.5 26.0 0.153 0.0 NAG
HOH
 7.900
3.651
 CD2
CD2
 O7
O
2i9b 2 Q03405 98.56 0.0 X-RAY
 2007-01-02 LEU E:25 E:23 31.0 0.182 E -145.2 136.1 31.0 0.182 0.0 NAG
NAG
SO4
 6.478
9.295
9.037
 CD2
CD1
N
 O7
O7
O4
LEU F:25 F:23 31.0 0.182 E -144.5 138.9 NA NA NA
LEU G:25 G:23 38.0 0.224 E -112.6 144.2 NA NA NA
LEU H:25 H:23 38.0 0.224 E -112.6 143.8 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q03405-f1 1 Q03405 100.0 0.0 LEU A:45 A:45 27.0 0.159 E -129.3 149.3