Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 44171787 . C A CCDS33041.1:NM_001005376.2:c.112Gag>Tag_NP_001005376.1:p.38E>* Homo sapiens plasminogen activator, urokinase receptor (PLAUR), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1ywh 1 Q9UMV0 99.68 0.0 X-RAY
 2005-05-10 GLU A:16 A:16 122.0 0.642 E -98.5 111.2 7.0 0.037 0.605 H:None:0.205
G:Q9UMV0:0.521
 SO4
HOH
 7.176
2.897
 OE1
OE2
 O4
O
GLU C:16 C:16 155.0 0.816 E -99.3 111.3 42.0 0.221 0.595 B:None:0.532
A:Q9UMV0:0.116
 SO4
HOH
 7.593
7.340
 N
OE2
 O3
O
GLU E:16 E:16 120.0 0.632 E -91.2 106.7 16.0 0.084 0.548 C:Q9UMV0:0.468
D:None:0.195
 SO4
HOH
 6.500
2.551
 OE1
OE2
 O4
O
GLU G:16 G:16 145.0 0.763 E -83.3 114.4 72.0 0.379 0.384 F:None:0.326
E:Q9UMV0:0.058
 SO4
HOH
 8.170
3.237
 N
N
 O4
O
GLU I:16 I:16 136.0 0.716 E -80.9 129.2 68.0 0.358 0.358 O:Q9UMV0:0.089
P:None:0.332
 SO4
HOH
 8.936
3.728
 N
OE2
 O2
O
GLU K:16 K:16 109.0 0.574 E -87.0 121.2 8.0 0.042 0.532 J:None:0.232
I:Q9UMV0:0.437
 SO4
HOH
 7.446
2.754
 OE1
N
 O4
O
GLU M:16 M:16 121.0 0.637 E -83.6 115.0 18.0 0.095 0.542 K:Q9UMV0:0.221
L:None:0.4
 SO4
HOH
 8.784
3.751
 N
N
 O2
O
GLU O:16 O:16 124.0 0.653 E -79.4 127.1 6.0 0.032 0.621 M:Q9UMV0:0.516
N:None:0.247
 SO4
HOH
 7.225
2.887
 OE1
OE1
 O1
O
4qti 3 Q03405 100.0 0.0 X-RAY
 2015-02-25 GLU C:16 U:16 140.0 0.737 E -63.5 107.0 140.0 0.737 0.0
3bt1 3 Q03405 100.0 0.0 X-RAY
 2008-03-25 GLU C:18 U:16 168.0 0.884 E -64.7 98.5 168.0 0.884 0.0
3bt2 5 Q03405 100.0 0.0 X-RAY
 2008-03-25 GLU E:18 U:16 137.0 0.721 E -75.7 124.8 137.0 0.721 0.0
4k24 5 Q03405 100.0 0.0 X-RAY
 2014-02-26 GLU E:18 U:16 119.0 0.626 -84.5 7.6 119.0 0.626 0.0
3u73 1 Q03405 99.29 0.0 X-RAY
 2012-04-18 GLU A:16 U:16 141.0 0.742 E -79.2 113.0 141.0 0.742 0.0
3u74 1 Q03405 99.29 0.0 X-RAY
 2012-04-18 GLU A:16 U:16 126.0 0.663 E -70.2 116.5 126.0 0.663 0.0
7e17 1 Q03405 100.0 0.0 X-RAY
 2021-12-22 GLU A:18 A:16 132.0 0.695 E -71.6 137.6 132.0 0.695 0.0
GLU B:18 B:16 114.0 0.6 E -59.1 142.3 114.0 0.6 0.0
7v63 1 Q03405 100.0 0.0 X-RAY
 2021-12-22 GLU A:18 A:16 148.0 0.779 E -64.4 115.0 148.0 0.779 0.0
GLU B:18 B:16 127.0 0.668 E -65.0 104.1 127.0 0.668 0.0
2fd6 4 Q03405 100.0 0.0 X-RAY
 2006-02-21 GLU D:17 U:16 153.0 0.805 E -90.0 106.5 153.0 0.805 0.0 HOH
 2.830
 N
 O
2i9b 2 Q03405 98.56 0.0 X-RAY
 2007-01-02 GLU E:18 E:16 134.0 0.705 E -99.9 128.3 134.0 0.705 0.0 HOH
 8.713
 OE2
 O
GLU F:18 F:16 133.0 0.7 E -98.0 125.8 NA NA NA
GLU G:18 G:16 167.0 0.879 -82.9 66.8 NA NA NA
GLU H:18 H:16 167.0 0.879 -85.1 66.0 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q03405-f1 1 Q03405 100.0 0.0 GLU A:38 A:38 140.0 0.737 E -88.6 122.1