Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 45419476 . G A CCDS12648.1:NM_001645.3:c.88Gtc>Atc_NP_001636.1:p.30V>I Homo sapiens apolipoprotein C-I (APOC1), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6dvu 1 P02654 100.0 2e-54 X-RAY
 2018-12-26 VAL A:30 NA:NA DO NA DO DO DO NA NA NA
VAL B:30 B:4 107.0 0.69 H -65.9 -33.7 NA NA NA
6dxr 1 P02654 100.0 2e-54 X-RAY
 2018-12-26 VAL A:30 NA:NA DO NA DO DO DO NA NA NA
VAL B:30 B:4 105.0 0.677 H -57.8 -38.7 NA NA NA
6dz6 1 P02654 100.0 2e-54 X-RAY
 2018-12-26 VAL A:30 A:4 93.0 0.6 -101.0 12.6 93.0 0.6 0.0 HOH
 8.397
 O
 O
VAL B:30 NA:NA DO NA DO DO DO NA NA NA
6nf3 1 P02654 100.0 2e-54 X-RAY
 2018-12-26 VAL A:30 NA:NA DO NA DO DO DO NA NA NA
VAL B:30 B:4 184.0 1.0 360.0 33.8 NA NA NA
1ioj 1 P02654 100.0 7e-35 NMR
 1998-08-12 VAL A:4 A:4 75.0 0.484 -92.2 149.5 75.0 0.484 0.0
1opp 1 P02654 100.0 3e-20 NMR
 1998-05-13 VAL A:4 A:4 114.0 0.735 T -79.0 84.6 114.0 0.735 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p02654-f1 1 P02654 100.0 7e-55 VAL A:30 A:30 101.0 0.652 H -53.6 -33.6