Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 45419482 . A C CCDS12648.1:NM_001645.3:c.94Agt>Cgt_NP_001636.1:p.32S>R Homo sapiens apolipoprotein C-I (APOC1), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6dvu 1 P02654 100.0 2e-54 X-RAY
 2018-12-26 SER A:32 A:6 104.0 0.904 H -65.0 -51.1 104.0 0.904 0.0
SER B:32 B:6 66.0 0.574 H -56.8 -32.6 NA NA NA
6dxr 1 P02654 100.0 2e-54 X-RAY
 2018-12-26 SER A:32 A:6 76.0 0.661 H -71.1 -49.1 76.0 0.661 0.0
SER B:32 B:6 71.0 0.617 H -67.2 -29.2 NA NA NA
6dz6 1 P02654 100.0 2e-54 X-RAY
 2018-12-26 SER A:32 A:6 78.0 0.678 H -65.6 -39.7 78.0 0.678 0.0 HOH
 3.929
 O
 O
SER B:32 B:6 106.0 0.922 H -81.0 -34.9 106.0 0.922 0.0 HOH
 3.503
 OG
 O
6nf3 1 P02654 100.0 2e-54 X-RAY
 2018-12-26 SER A:32 NA:NA DO NA DO DO DO NA NA NA
SER B:32 B:6 98.0 0.852 H -81.8 -9.3 NA NA NA
1ioj 1 P02654 100.0 7e-35 NMR
 1998-08-12 SER A:6 A:6 92.0 0.8 S 45.4 57.4 92.0 0.8 0.0
1opp 1 P02654 100.0 3e-20 NMR
 1998-05-13 SER A:6 A:6 70.0 0.609 S -150.2 44.1 70.0 0.609 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p02654-f1 1 P02654 100.0 7e-55 SER A:32 A:32 57.0 0.496 H -68.3 -32.4