Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr19 | 47342760 | . | T | A | CCDS33062.1:NM_004069.3:c.229Aac>Tac_NP_004060.2:p.77N>Y | Homo sapiens adaptor-related protein complex 2, sigma 1 subunit (AP2S1), transcript variant AP17, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
2jkr | 3 | P62743 | 100.0 | 1e-102 |
X-RAY |
2008-10-28 | ASN | D:77 | I:77 | 36.0 | 0.225 | H | -54.3 | -53.5 | NA | NA | NA | ||||||
ASN | I:77 | S:77 | 37.0 | 0.231 | H | -56.4 | -52.1 | 8.0 | 0.05 | 0.181 |
A:P17427:0.181 |
HOH |
7.173 |
N |
O |
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2jkt | 3 | P62743 | 100.0 | 1e-102 |
X-RAY |
2008-10-28 | ASN | D:77 | I:77 | 36.0 | 0.225 | H | -53.3 | -47.1 | NA | NA | NA | ||||||
ASN | I:77 | S:77 | 35.0 | 0.219 | H | -54.3 | -45.9 | 8.0 | 0.05 | 0.169 |
A:P17427:0.169 |
HOH |
7.205 |
N |
O |
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2vgl | 4 | P62743 | 100.0 | 1e-102 |
X-RAY |
2007-12-25 | ASN | D:77 | S:77 | 43.0 | 0.269 | H | -59.0 | -46.8 | 14.0 | 0.087 | 0.182 |
A:Q66HM2:0.181 |
HOH |
8.685 |
N |
O |
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2xa7 | 5 | P62743 | 100.0 | 1e-102 |
X-RAY |
2010-07-21 | ASN | E:77 | S:77 | 44.0 | 0.275 | H | -22.0 | -70.4 | 4.0 | 0.025 | 0.25 |
A:Q66HM2:0.25 |
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4nee | 1 | P62744 | 100.0 | 1e-102 |
X-RAY |
2014-01-29 | ASN | A:77 | D:77 | 48.0 | 0.3 | H | -61.1 | -50.5 | 10.0 | 0.062 | 0.238 |
F:Q66HM2:0.237 |
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ASN | B:77 | L:77 | 40.0 | 0.25 | H | -61.1 | -49.8 | NA | NA | NA | |||||||||||||
ASN | C:77 | F:77 | 35.0 | 0.219 | H | -60.5 | -50.8 | NA | NA | NA | |||||||||||||
ASN | D:77 | I:77 | 42.0 | 0.263 | H | -60.2 | -49.6 | NA | NA | NA | |||||||||||||
4uqi | 4 | P62743 | 100.0 | 1e-102 |
X-RAY |
2014-07-30 | ASN | D:77 | S:77 | 43.0 | 0.269 | H | -54.2 | -47.3 | 12.0 | 0.075 | 0.194 |
A:P18484:0.194 |
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6owo | 4 | P62744 | 100.0 | 1e-102 |
EM |
2019-09-11 | ASN | D:77 | S:77 | 40.0 | 0.25 | T | -75.1 | -10.3 | 9.0 | 0.056 | 0.194 |
A:None:0.194 |
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6oxl | 4 | P62744 | 100.0 | 1e-102 |
EM |
2019-09-11 | ASN | D:77 | S:77 | 33.0 | 0.206 | T | -76.0 | -18.3 | 4.0 | 0.025 | 0.181 |
A:None:0.181 |
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6qh5 | 5 | P62743 | 100.0 | 1e-102 |
X-RAY |
2019-09-04 | ASN | E:77 | S:77 | 45.0 | 0.281 | H | -63.4 | -42.1 | 13.0 | 0.081 | 0.2 |
A:Q66HM2:0.2 |
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6qh6 | 7 | P62743 | 100.0 | 1e-102 |
X-RAY |
2019-09-04 | ASN | G:77 | S:77 | 46.0 | 0.287 | H | -55.0 | -54.0 | 2.0 | 0.013 | 0.274 |
A:Q66HM2:0.275 |
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6qh7 | 6 | P62743 | 100.0 | 1e-102 |
X-RAY |
2019-09-04 | ASN | G:77 | S:77 | 45.0 | 0.281 | H | -56.3 | -53.3 | 2.0 | 0.013 | 0.268 |
A:Q66HM2:0.269 |
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6yae | 4 | P62743 | 100.0 | 1e-102 |
EM |
2020-07-29 | ASN | D:77 | S:77 | 39.0 | 0.244 | S | -113.7 | -51.4 | 11.0 | 0.069 | 0.175 |
A:Q66HM2:0.175 |
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6yaf | 5 | P62743 | 100.0 | 1e-102 |
EM |
2020-07-29 | ASN | E:77 | S:77 | 43.0 | 0.269 | H | -39.7 | -43.2 | 24.0 | 0.15 | 0.119 |
A:P18484:0.119 |
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6yah | 4 | P62743 | 100.0 | 1e-102 |
EM |
2020-07-29 | ASN | D:77 | S:77 | 43.0 | 0.269 | H | -39.8 | -43.2 | 25.0 | 0.156 | 0.113 |
A:P18484:0.113 |
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6uri | 2 | P53680 | 99.3 | 4e-102 |
X-RAY |
2020-07-29 | ASN | B:77 | S:77 | 42.0 | 0.263 | H | -75.6 | -50.1 | 5.0 | 0.031 | 0.232 |
A:Q66HM2:0.231 |
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6owt | 5 | P62744 | 98.59 | 6e-100 |
EM |
2019-09-25 | ASN | F:77 | S:77 | 26.0 | 0.163 | H | -71.4 | -35.8 | 3.0 | 0.019 | 0.144 |
A:Q66HM2:0.144 |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p53680-f1 | 1 | P53680 | 100.0 | 6e-103 | ASN | A:77 | A:77 | 32.0 | 0.2 | H | -50.2 | -40.0 |