Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 47342760 . T A CCDS33062.1:NM_004069.3:c.229Aac>Tac_NP_004060.2:p.77N>Y Homo sapiens adaptor-related protein complex 2, sigma 1 subunit (AP2S1), transcript variant AP17, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2jkr 3 P62743 100.0 1e-102 X-RAY
2008-10-28 ASN D:77 I:77 36.0 0.225 H -54.3 -53.5 NA NA NA
ASN I:77 S:77 37.0 0.231 H -56.4 -52.1 8.0 0.05 0.181 A:P17427:0.181
HOH
7.173
N
O
2jkt 3 P62743 100.0 1e-102 X-RAY
2008-10-28 ASN D:77 I:77 36.0 0.225 H -53.3 -47.1 NA NA NA
ASN I:77 S:77 35.0 0.219 H -54.3 -45.9 8.0 0.05 0.169 A:P17427:0.169
HOH
7.205
N
O
2vgl 4 P62743 100.0 1e-102 X-RAY
2007-12-25 ASN D:77 S:77 43.0 0.269 H -59.0 -46.8 14.0 0.087 0.182 A:Q66HM2:0.181
HOH
8.685
N
O
2xa7 5 P62743 100.0 1e-102 X-RAY
2010-07-21 ASN E:77 S:77 44.0 0.275 H -22.0 -70.4 4.0 0.025 0.25 A:Q66HM2:0.25
4nee 1 P62744 100.0 1e-102 X-RAY
2014-01-29 ASN A:77 D:77 48.0 0.3 H -61.1 -50.5 10.0 0.062 0.238 F:Q66HM2:0.237
ASN B:77 L:77 40.0 0.25 H -61.1 -49.8 NA NA NA
ASN C:77 F:77 35.0 0.219 H -60.5 -50.8 NA NA NA
ASN D:77 I:77 42.0 0.263 H -60.2 -49.6 NA NA NA
4uqi 4 P62743 100.0 1e-102 X-RAY
2014-07-30 ASN D:77 S:77 43.0 0.269 H -54.2 -47.3 12.0 0.075 0.194 A:P18484:0.194
6owo 4 P62744 100.0 1e-102 EM
2019-09-11 ASN D:77 S:77 40.0 0.25 T -75.1 -10.3 9.0 0.056 0.194 A:None:0.194
6oxl 4 P62744 100.0 1e-102 EM
2019-09-11 ASN D:77 S:77 33.0 0.206 T -76.0 -18.3 4.0 0.025 0.181 A:None:0.181
6qh5 5 P62743 100.0 1e-102 X-RAY
2019-09-04 ASN E:77 S:77 45.0 0.281 H -63.4 -42.1 13.0 0.081 0.2 A:Q66HM2:0.2
6qh6 7 P62743 100.0 1e-102 X-RAY
2019-09-04 ASN G:77 S:77 46.0 0.287 H -55.0 -54.0 2.0 0.013 0.274 A:Q66HM2:0.275
6qh7 6 P62743 100.0 1e-102 X-RAY
2019-09-04 ASN G:77 S:77 45.0 0.281 H -56.3 -53.3 2.0 0.013 0.268 A:Q66HM2:0.269
6yae 4 P62743 100.0 1e-102 EM
2020-07-29 ASN D:77 S:77 39.0 0.244 S -113.7 -51.4 11.0 0.069 0.175 A:Q66HM2:0.175
6yaf 5 P62743 100.0 1e-102 EM
2020-07-29 ASN E:77 S:77 43.0 0.269 H -39.7 -43.2 24.0 0.15 0.119 A:P18484:0.119
6yah 4 P62743 100.0 1e-102 EM
2020-07-29 ASN D:77 S:77 43.0 0.269 H -39.8 -43.2 25.0 0.156 0.113 A:P18484:0.113
6uri 2 P53680 99.3 4e-102 X-RAY
2020-07-29 ASN B:77 S:77 42.0 0.263 H -75.6 -50.1 5.0 0.031 0.232 A:Q66HM2:0.231
6owt 5 P62744 98.59 6e-100 EM
2019-09-25 ASN F:77 S:77 26.0 0.163 H -71.4 -35.8 3.0 0.019 0.144 A:Q66HM2:0.144

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p53680-f1 1 P53680 100.0 6e-103 ASN A:77 A:77 32.0 0.2 H -50.2 -40.0