Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 47349273 . C A CCDS12693.1:NM_021575.2:c.130Gcc>Tcc_NP_067586.1:p.44A>S Homo sapiens adaptor-related protein complex 2, sigma 1 subunit (AP2S1), transcript variant AP17, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2jkr 3 P62743 100.0 1e-102 X-RAY
2008-10-28 ALA D:44 I:44 100.0 0.87 S 58.7 -14.8 NA NA NA
ALA I:44 S:44 101.0 0.878 S 60.2 -15.4 99.0 0.861 0.017 A:P17427:0.017
2jkt 3 P62743 100.0 1e-102 X-RAY
2008-10-28 ALA D:44 I:44 99.0 0.861 S 63.4 -31.9 NA NA NA
ALA I:44 S:44 100.0 0.87 S 64.5 -31.5 96.0 0.835 0.035 A:P17427:0.035
2vgl 4 P62743 100.0 1e-102 X-RAY
2007-12-25 ALA D:44 S:44 108.0 0.939 T -43.7 -32.2 108.0 0.939 0.0
2xa7 5 P62743 100.0 1e-102 X-RAY
2010-07-21 ALA E:44 S:44 67.0 0.583 T -68.7 -53.4 67.0 0.583 0.0 SO4
SO4
SO4
9.674
2.739
5.038
C
N
CA
O4
O2
O4
4nee 1 P62744 100.0 1e-102 X-RAY
2014-01-29 ALA A:44 D:44 89.0 0.774 S -51.5 -42.6 32.0 0.278 0.496 F:Q66HM2:0.009
L:Q90VU7:0.487
ALA B:44 L:44 91.0 0.791 T -49.4 -32.2 NA NA NA
ALA C:44 F:44 99.0 0.861 S 63.4 -113.1 NA NA NA
ALA D:44 I:44 95.0 0.826 S -51.8 -61.2 NA NA NA
4uqi 4 P62743 100.0 1e-102 X-RAY
2014-07-30 ALA D:44 S:44 106.0 0.922 T -64.5 -12.6 106.0 0.922 0.0
6owo 4 P62744 100.0 1e-102 EM
2019-09-11 ALA D:44 S:44 92.0 0.8 T -78.3 -8.0 92.0 0.8 0.0
6oxl 4 P62744 100.0 1e-102 EM
2019-09-11 ALA D:44 S:44 100.0 0.87 T -76.0 -7.6 98.0 0.852 0.018 A:None:0.017
6qh5 5 P62743 100.0 1e-102 X-RAY
2019-09-04 ALA E:44 S:44 106.0 0.922 T -68.0 -8.2 104.0 0.904 0.018 A:Q66HM2:0.017
6qh6 7 P62743 100.0 1e-102 X-RAY
2019-09-04 ALA G:44 S:44 109.0 0.948 T -61.6 -21.5 106.0 0.922 0.026 A:Q66HM2:0.026
6qh7 6 P62743 100.0 1e-102 X-RAY
2019-09-04 ALA G:44 S:44 107.0 0.93 S -63.0 -25.0 107.0 0.93 0.0
6yae 4 P62743 100.0 1e-102 EM
2020-07-29 ALA D:44 S:44 97.0 0.843 T -64.1 -27.1 97.0 0.843 0.0
6yaf 5 P62743 100.0 1e-102 EM
2020-07-29 ALA E:44 S:44 92.0 0.8 T -79.3 -27.7 91.0 0.791 0.009 A:P18484:0.009
6yah 4 P62743 100.0 1e-102 EM
2020-07-29 ALA D:44 S:44 95.0 0.826 T -79.3 -27.6 94.0 0.817 0.009 A:P18484:0.009
6uri 2 P53680 99.3 4e-102 X-RAY
2020-07-29 ALA B:44 S:44 106.0 0.922 T -56.0 -36.9 36.0 0.313 0.609 A:Q66HM2:0.043
C:Q90VU7:0.565
6owt 5 P62744 98.59 6e-100 EM
2019-09-25 ALA F:44 S:44 98.0 0.852 T -75.0 -19.0 52.0 0.452 0.4 E:C3VHQ5+Q4JGV0:0.4

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p53680-f1 1 P53680 100.0 6e-103 ALA A:44 A:44 110.0 0.957 T -67.6 -9.4