Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr19 | 47349273 | . | C | A | CCDS12693.1:NM_021575.2:c.130Gcc>Tcc_NP_067586.1:p.44A>S | Homo sapiens adaptor-related protein complex 2, sigma 1 subunit (AP2S1), transcript variant AP17, mRNA. |
---|---|---|---|---|---|---|---|
|
|
|
|
PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
2jkr | 3 | P62743 | 100.0 | 1e-102 |
X-RAY |
2008-10-28 | ALA | D:44 | I:44 | 100.0 | 0.87 | S | 58.7 | -14.8 | NA | NA | NA | ||||||
ALA | I:44 | S:44 | 101.0 | 0.878 | S | 60.2 | -15.4 | 99.0 | 0.861 | 0.017 |
A:P17427:0.017 |
||||||||||||
2jkt | 3 | P62743 | 100.0 | 1e-102 |
X-RAY |
2008-10-28 | ALA | D:44 | I:44 | 99.0 | 0.861 | S | 63.4 | -31.9 | NA | NA | NA | ||||||
ALA | I:44 | S:44 | 100.0 | 0.87 | S | 64.5 | -31.5 | 96.0 | 0.835 | 0.035 |
A:P17427:0.035 |
||||||||||||
2vgl | 4 | P62743 | 100.0 | 1e-102 |
X-RAY |
2007-12-25 | ALA | D:44 | S:44 | 108.0 | 0.939 | T | -43.7 | -32.2 | 108.0 | 0.939 | 0.0 | ||||||
2xa7 | 5 | P62743 | 100.0 | 1e-102 |
X-RAY |
2010-07-21 | ALA | E:44 | S:44 | 67.0 | 0.583 | T | -68.7 | -53.4 | 67.0 | 0.583 | 0.0 |
SO4 SO4 SO4 |
9.674 2.739 5.038 |
C N CA |
O4 O2 O4 |
||
4nee | 1 | P62744 | 100.0 | 1e-102 |
X-RAY |
2014-01-29 | ALA | A:44 | D:44 | 89.0 | 0.774 | S | -51.5 | -42.6 | 32.0 | 0.278 | 0.496 |
F:Q66HM2:0.009 L:Q90VU7:0.487 |
|||||
ALA | B:44 | L:44 | 91.0 | 0.791 | T | -49.4 | -32.2 | NA | NA | NA | |||||||||||||
ALA | C:44 | F:44 | 99.0 | 0.861 | S | 63.4 | -113.1 | NA | NA | NA | |||||||||||||
ALA | D:44 | I:44 | 95.0 | 0.826 | S | -51.8 | -61.2 | NA | NA | NA | |||||||||||||
4uqi | 4 | P62743 | 100.0 | 1e-102 |
X-RAY |
2014-07-30 | ALA | D:44 | S:44 | 106.0 | 0.922 | T | -64.5 | -12.6 | 106.0 | 0.922 | 0.0 | ||||||
6owo | 4 | P62744 | 100.0 | 1e-102 |
EM |
2019-09-11 | ALA | D:44 | S:44 | 92.0 | 0.8 | T | -78.3 | -8.0 | 92.0 | 0.8 | 0.0 | ||||||
6oxl | 4 | P62744 | 100.0 | 1e-102 |
EM |
2019-09-11 | ALA | D:44 | S:44 | 100.0 | 0.87 | T | -76.0 | -7.6 | 98.0 | 0.852 | 0.018 |
A:None:0.017 |
|||||
6qh5 | 5 | P62743 | 100.0 | 1e-102 |
X-RAY |
2019-09-04 | ALA | E:44 | S:44 | 106.0 | 0.922 | T | -68.0 | -8.2 | 104.0 | 0.904 | 0.018 |
A:Q66HM2:0.017 |
|||||
6qh6 | 7 | P62743 | 100.0 | 1e-102 |
X-RAY |
2019-09-04 | ALA | G:44 | S:44 | 109.0 | 0.948 | T | -61.6 | -21.5 | 106.0 | 0.922 | 0.026 |
A:Q66HM2:0.026 |
|||||
6qh7 | 6 | P62743 | 100.0 | 1e-102 |
X-RAY |
2019-09-04 | ALA | G:44 | S:44 | 107.0 | 0.93 | S | -63.0 | -25.0 | 107.0 | 0.93 | 0.0 | ||||||
6yae | 4 | P62743 | 100.0 | 1e-102 |
EM |
2020-07-29 | ALA | D:44 | S:44 | 97.0 | 0.843 | T | -64.1 | -27.1 | 97.0 | 0.843 | 0.0 | ||||||
6yaf | 5 | P62743 | 100.0 | 1e-102 |
EM |
2020-07-29 | ALA | E:44 | S:44 | 92.0 | 0.8 | T | -79.3 | -27.7 | 91.0 | 0.791 | 0.009 |
A:P18484:0.009 |
|||||
6yah | 4 | P62743 | 100.0 | 1e-102 |
EM |
2020-07-29 | ALA | D:44 | S:44 | 95.0 | 0.826 | T | -79.3 | -27.6 | 94.0 | 0.817 | 0.009 |
A:P18484:0.009 |
|||||
6uri | 2 | P53680 | 99.3 | 4e-102 |
X-RAY |
2020-07-29 | ALA | B:44 | S:44 | 106.0 | 0.922 | T | -56.0 | -36.9 | 36.0 | 0.313 | 0.609 |
A:Q66HM2:0.043 C:Q90VU7:0.565 |
|||||
6owt | 5 | P62744 | 98.59 | 6e-100 |
EM |
2019-09-25 | ALA | F:44 | S:44 | 98.0 | 0.852 | T | -75.0 | -19.0 | 52.0 | 0.452 | 0.4 |
E:C3VHQ5+Q4JGV0:0.4 |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p53680-f1 | 1 | P53680 | 100.0 | 6e-103 | ALA | A:44 | A:44 | 110.0 | 0.957 | T | -67.6 | -9.4 |