Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr19 | 49299903 | . | G | A | CCDS12735.1:NM_001190.3:c.997Cgg>Tgg_NP_001181.2:p.333R>W | Homo sapiens branched chain amino acid transaminase 2 (BCAT2), transcript variant a, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
5bwr | 1 | O15382 | 100.0 | 0.0 |
X-RAY |
2015-07-01 | ARG | A:310 | A:306 | 82.0 | 0.364 | E | -97.0 | -61.6 | 82.0 | 0.364 | 0.0 |
EDO HOH |
4.350 2.251 |
NH2 NH2 |
O2 O |
||
ARG | B:310 | B:306 | 67.0 | 0.298 | E | -103.5 | -46.4 | 67.0 | 0.298 | 0.0 |
EDO HOH |
3.674 3.256 |
NH2 CD |
O2 O |
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5bwt | 1 | O15382 | 100.0 | 0.0 |
X-RAY |
2015-07-01 | ARG | A:310 | A:306 | 81.0 | 0.36 | E | -93.2 | -61.9 | 81.0 | 0.36 | 0.0 |
EDO HOH |
4.179 2.494 |
NH2 NH2 |
O2 O |
||
ARG | B:310 | B:306 | 66.0 | 0.293 | E | -99.7 | -49.0 | 66.0 | 0.293 | 0.0 |
EDO HOH |
3.504 2.820 |
NH2 NH2 |
O1 O |
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5bwu | 1 | O15382 | 100.0 | 0.0 |
X-RAY |
2015-07-01 | ARG | A:310 | A:306 | 90.0 | 0.4 | E | -91.2 | -55.6 | 90.0 | 0.4 | 0.0 |
EDO HOH |
4.091 2.380 |
NH1 NH1 |
O2 O |
||
ARG | B:310 | B:306 | 72.0 | 0.32 | E | -95.3 | -54.7 | 72.0 | 0.32 | 0.0 |
EDO HOH |
3.494 3.217 |
NH1 CD |
O2 O |
|||||||||
5bwv | 1 | O15382 | 100.0 | 0.0 |
X-RAY |
2015-07-01 | ARG | A:310 | A:306 | 67.0 | 0.298 | E | -96.0 | -55.6 | 67.0 | 0.298 | 0.0 |
EDO GOL HOH |
2.914 4.864 2.671 |
NH2 NH2 NE |
O2 O1 O |
||
ARG | B:310 | B:306 | 65.0 | 0.289 | E | -102.0 | -53.8 | 65.0 | 0.289 | 0.0 |
EDO HOH |
3.327 2.913 |
NH2 NH2 |
O2 O |
|||||||||
5bww | 1 | O15382 | 100.0 | 0.0 |
X-RAY |
2015-07-01 | ARG | A:310 | A:306 | 60.0 | 0.267 | E | -96.1 | -56.7 | 60.0 | 0.267 | 0.0 |
EDO HOH |
3.301 2.836 |
NH2 NE |
O2 O |
||
ARG | B:310 | B:306 | 72.0 | 0.32 | E | -93.5 | -55.3 | 72.0 | 0.32 | 0.0 |
EDO HOH |
3.672 2.614 |
NH1 NH2 |
O2 O |
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5bwx | 1 | O15382 | 100.0 | 0.0 |
X-RAY |
2015-07-01 | ARG | A:310 | A:306 | 62.0 | 0.276 | E | -97.2 | -55.6 | 62.0 | 0.276 | 0.0 |
EDO HOH |
3.179 2.726 |
NH2 NH1 |
O2 O |
||
ARG | B:310 | B:306 | 57.0 | 0.253 | E | -95.9 | -52.5 | 57.0 | 0.253 | 0.0 |
EDO EDO HOH |
3.287 6.775 2.748 |
NH2 O NH2 |
O2 C2 O |
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5cr5 | 1 | O15382 | 100.0 | 0.0 |
X-RAY |
2015-08-12 | ARG | A:310 | A:306 | 88.0 | 0.391 | E | -98.5 | -57.3 | 88.0 | 0.391 | 0.0 |
HOH |
2.316 |
NH2 |
O |
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ARG | B:310 | B:306 | 61.0 | 0.271 | E | -98.8 | -55.4 | 61.0 | 0.271 | 0.0 |
EDO HOH |
3.446 2.810 |
NH2 NH2 |
O2 O |
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5hne | 1 | O15382 | 100.0 | 0.0 |
X-RAY |
2016-05-04 | ARG | A:310 | A:306 | 64.0 | 0.284 | E | -100.1 | -54.4 | 64.0 | 0.284 | 0.0 |
EDO HOH |
2.873 2.677 |
NH2 NE |
O2 O |
||
ARG | B:310 | B:306 | 67.0 | 0.298 | E | -100.2 | -50.7 | 67.0 | 0.298 | 0.0 |
EDO HOH |
3.480 2.825 |
NH2 NH2 |
O2 O |
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5i5s | 1 | O15382 | 100.0 | 0.0 |
X-RAY |
2016-03-23 | ARG | A:310 | A:306 | 82.0 | 0.364 | E | -99.1 | -57.7 | 82.0 | 0.364 | 0.0 |
EDO HOH |
4.229 2.546 |
NH2 NH2 |
O2 O |
||
ARG | B:310 | B:306 | 64.0 | 0.284 | E | -97.8 | -52.3 | 64.0 | 0.284 | 0.0 |
EDO HOH |
3.669 3.010 |
NH2 NH2 |
O2 O |
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5i5t | 1 | O15382 | 100.0 | 0.0 |
X-RAY |
2016-03-23 | ARG | A:310 | A:306 | 79.0 | 0.351 | E | -96.2 | -58.3 | 79.0 | 0.351 | 0.0 |
EDO HOH |
3.686 2.304 |
NH2 NH2 |
O2 O |
||
ARG | B:310 | B:306 | 77.0 | 0.342 | E | -103.0 | -50.3 | 77.0 | 0.342 | 0.0 |
EDO HOH |
3.581 2.314 |
NH2 NH2 |
O2 O |
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5i5u | 1 | O15382 | 100.0 | 0.0 |
X-RAY |
2016-03-23 | ARG | A:310 | A:306 | 84.0 | 0.373 | E | -95.9 | -55.8 | 84.0 | 0.373 | 0.0 |
EDO HOH |
3.903 2.388 |
NH1 NH1 |
O2 O |
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ARG | B:310 | B:306 | 89.0 | 0.396 | E | -98.2 | -51.2 | 89.0 | 0.396 | 0.0 |
EDO HOH |
3.999 2.323 |
NH1 NH1 |
O2 O |
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5i5v | 1 | O15382 | 100.0 | 0.0 |
X-RAY |
2016-03-23 | ARG | A:310 | A:306 | 62.0 | 0.276 | E | -97.6 | -58.1 | 62.0 | 0.276 | 0.0 |
EDO HOH |
3.410 2.555 |
NH2 NH1 |
O2 O |
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ARG | B:310 | B:306 | 66.0 | 0.293 | E | -97.0 | -51.8 | 66.0 | 0.293 | 0.0 |
EDO HOH |
3.333 2.734 |
NH2 NH1 |
O2 O |
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5i5w | 1 | O15382 | 100.0 | 0.0 |
X-RAY |
2016-03-23 | ARG | A:310 | A:306 | 89.0 | 0.396 | E | -98.7 | -55.6 | 89.0 | 0.396 | 0.0 |
EDO HOH |
4.392 2.193 |
NH1 NH1 |
O2 O |
||
ARG | B:310 | B:306 | 65.0 | 0.289 | E | -98.6 | -51.1 | 65.0 | 0.289 | 0.0 |
EDO HOH |
3.301 3.128 |
NH2 CG |
O2 O |
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5i5x | 1 | O15382 | 100.0 | 0.0 |
X-RAY |
2016-03-23 | ARG | A:310 | A:306 | 63.0 | 0.28 | E | -94.5 | -57.9 | 63.0 | 0.28 | 0.0 |
EDO HOH |
3.251 2.802 |
NH2 NE |
O2 O |
||
ARG | B:310 | B:306 | 57.0 | 0.253 | E | -99.0 | -54.9 | 57.0 | 0.253 | 0.0 |
EDO HOH |
3.405 2.796 |
NH2 NH2 |
O2 O |
|||||||||
5i5y | 1 | O15382 | 100.0 | 0.0 |
X-RAY |
2016-03-23 | ARG | A:310 | A:306 | 65.0 | 0.289 | E | -100.8 | -55.9 | 65.0 | 0.289 | 0.0 |
EDO HOH |
3.074 2.814 |
NH2 NH1 |
O1 O |
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ARG | B:310 | B:306 | 100.0 | 0.444 | E | -96.9 | -55.6 | 100.0 | 0.444 | 0.0 |
EDO HOH |
4.441 2.970 |
NH1 NE |
O2 O |
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5i60 | 1 | O15382 | 100.0 | 0.0 |
X-RAY |
2016-03-23 | ARG | A:310 | A:306 | 67.0 | 0.298 | E | -100.3 | -56.9 | 67.0 | 0.298 | 0.0 |
EDO HOH |
2.925 2.265 |
NH2 NH1 |
O2 O |
||
ARG | B:310 | B:306 | 64.0 | 0.284 | E | -98.7 | -52.6 | 64.0 | 0.284 | 0.0 |
EDO HOH |
3.131 2.878 |
NH2 NE |
O2 O |
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1ekf | 1 | O15382 | 99.73 | 0.0 |
X-RAY |
2001-03-08 | ARG | A:306 | A:306 | 62.0 | 0.276 | E | -100.5 | -55.3 | 62.0 | 0.276 | 0.0 |
HOH |
2.967 |
NH2 |
O |
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ARG | B:306 | B:306 | 59.0 | 0.262 | E | -101.3 | -54.2 | 59.0 | 0.262 | 0.0 |
HOH |
3.321 |
NH2 |
O |
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1ekp | 1 | O15382 | 99.73 | 0.0 |
X-RAY |
2001-03-09 | ARG | A:306 | A:306 | 73.0 | 0.324 | E | -112.7 | -53.4 | 73.0 | 0.324 | 0.0 |
HOH |
3.236 |
CD |
O |
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ARG | B:306 | B:306 | 73.0 | 0.324 | E | -112.2 | -53.0 | 73.0 | 0.324 | 0.0 |
HOH |
3.043 |
NE |
O |
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1ekv | 1 | O15382 | 99.73 | 0.0 |
X-RAY |
2001-03-09 | ARG | A:306 | A:306 | 58.0 | 0.258 | E | -101.7 | -56.1 | 58.0 | 0.258 | 0.0 |
HOH |
4.219 |
CG |
O |
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ARG | B:306 | B:306 | 59.0 | 0.262 | E | -102.7 | -56.7 | 59.0 | 0.262 | 0.0 |
HOH |
2.943 |
NE |
O |
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1kt8 | 1 | O15382 | 99.73 | 0.0 |
X-RAY |
2002-11-20 | ARG | A:306 | A:306 | 73.0 | 0.324 | E | -97.3 | -57.9 | 73.0 | 0.324 | 0.0 |
HOH |
3.135 |
CD |
O |
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ARG | B:306 | B:806 | 72.0 | 0.32 | E | -97.2 | -57.3 | 72.0 | 0.32 | 0.0 |
HOH |
2.914 |
NH2 |
O |
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1kta | 1 | O15382 | 99.73 | 0.0 |
X-RAY |
2002-11-20 | ARG | A:306 | A:306 | 69.0 | 0.307 | E | -98.3 | -53.8 | 69.0 | 0.307 | 0.0 |
HOH |
2.854 |
NH2 |
O |
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ARG | B:306 | B:806 | 65.0 | 0.289 | E | -98.3 | -50.7 | 65.0 | 0.289 | 0.0 |
ACY HOH |
8.434 3.442 |
NH2 NH1 |
OXT O |
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2a1h | 1 | O15382 | 99.73 | 0.0 |
X-RAY |
2005-09-06 | ARG | A:306 | A:306 | 64.0 | 0.284 | E | -100.5 | -57.4 | 64.0 | 0.284 | 0.0 |
HOH |
2.781 |
NH2 |
O |
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ARG | B:306 | B:306 | 78.0 | 0.347 | E | -103.4 | -57.5 | 78.0 | 0.347 | 0.0 |
HOH |
3.718 |
NE |
O |
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2hhf | 1 | O15382 | 99.73 | 0.0 |
X-RAY |
2006-10-24 | ARG | A:306 | A:306 | 59.0 | 0.262 | E | -102.8 | -64.4 | 59.0 | 0.262 | 0.0 |
HOH |
2.753 |
NE |
O |
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2hhf | 2 | O15382 | 99.73 | 0.0 |
X-RAY |
2006-10-24 | ARG | B:306 | B:806 | 81.0 | 0.36 | E | -105.1 | -57.2 | 81.0 | 0.36 | 0.0 |
HOH |
2.582 |
NE |
O |
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5mpr | 1 | O15382 | 99.73 | 0.0 |
X-RAY |
2017-07-19 | ARG | A:307 | A:306 | 70.0 | 0.311 | E | -100.0 | -51.8 | 70.0 | 0.311 | 0.0 |
EDO HOH |
3.335 2.974 |
NH2 NE |
O1 O |
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2hg8 | 1 | O15382 | 99.45 | 0.0 |
X-RAY |
2006-10-24 | ARG | A:306 | A:306 | 62.0 | 0.276 | E | -98.4 | -54.2 | 62.0 | 0.276 | 0.0 |
HOH |
3.635 |
NH2 |
O |
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ARG | B:306 | B:806 | 67.0 | 0.298 | E | -100.7 | -58.1 | 67.0 | 0.298 | 0.0 |
HOH |
3.278 |
NH2 |
O |
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2hgx | 1 | O15382 | 99.45 | 0.0 |
X-RAY |
2006-10-24 | ARG | A:306 | A:306 | 83.0 | 0.369 | E | -99.7 | -56.3 | 83.0 | 0.369 | 0.0 |
HOH |
2.552 |
NH2 |
O |
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ARG | B:306 | B:806 | 93.0 | 0.413 | E | -98.5 | -56.3 | 93.0 | 0.413 | 0.0 |
HOH |
2.859 |
NE |
O |
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2hgw | 1 | O15382 | 99.45 | 0.0 |
X-RAY |
2006-10-24 | ARG | A:306 | A:306 | 93.0 | 0.413 | E | -101.1 | -58.5 | 93.0 | 0.413 | 0.0 |
HOH |
3.719 |
CD |
O |
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ARG | B:306 | B:806 | 58.0 | 0.258 | E | -103.1 | -56.1 | 58.0 | 0.258 | 0.0 |
HOH |
4.879 |
N |
O |
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6prx | 1 | O15382 | 99.45 | 0.0 |
X-RAY |
2020-01-22 | ARG | A:324 | A:306 | 83.0 | 0.369 | E | -97.1 | -64.5 | 83.0 | 0.369 | 0.0 | ||||||
ARG | B:324 | B:306 | 83.0 | 0.369 | E | -97.1 | -64.5 | 83.0 | 0.369 | 0.0 | |||||||||||||
2hdk | 1 | O15382 | 99.18 | 0.0 |
X-RAY |
2006-10-24 | ARG | A:306 | A:306 | 90.0 | 0.4 | E | -96.7 | -59.3 | 90.0 | 0.4 | 0.0 |
HOH |
3.607 |
CB |
O |
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ARG | B:306 | B:806 | 88.0 | 0.391 | E | -102.5 | -57.4 | 88.0 | 0.391 | 0.0 |
HOH |
3.720 |
CG |
O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-o15382-f1 | 1 | O15382 | 100.0 | 0.0 | ARG | A:333 | A:333 | 63.0 | 0.28 | E | -96.4 | -57.3 |