Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr19 | 49299909 | . | G | A | CCDS12735.1:NM_001190.3:c.991Cgc>Tgc_NP_001181.2:p.331R>C | Homo sapiens branched chain amino acid transaminase 2 (BCAT2), transcript variant a, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
5bwr | 1 | O15382 | 100.0 | 0.0 |
X-RAY |
2015-07-01 | ARG | A:308 | A:304 | 28.0 | 0.124 | -96.5 | -17.4 | 28.0 | 0.124 | 0.0 |
HOH |
2.672 |
NH2 |
O |
|||
ARG | B:308 | B:304 | 33.0 | 0.147 | -91.9 | -9.0 | 33.0 | 0.147 | 0.0 |
HOH |
3.004 |
NH1 |
O |
||||||||||
5bwt | 1 | O15382 | 100.0 | 0.0 |
X-RAY |
2015-07-01 | ARG | A:308 | A:304 | 31.0 | 0.138 | -92.8 | -11.5 | 31.0 | 0.138 | 0.0 |
HOH |
2.825 |
NH2 |
O |
|||
ARG | B:308 | B:304 | 34.0 | 0.151 | -83.9 | -4.8 | 34.0 | 0.151 | 0.0 |
HOH |
2.767 |
NH2 |
O |
||||||||||
5bwu | 1 | O15382 | 100.0 | 0.0 |
X-RAY |
2015-07-01 | ARG | A:308 | A:304 | 31.0 | 0.138 | -97.6 | -15.6 | 31.0 | 0.138 | 0.0 |
HOH |
2.665 |
NH2 |
O |
|||
ARG | B:308 | B:304 | 34.0 | 0.151 | -85.0 | -8.6 | 34.0 | 0.151 | 0.0 |
HOH |
2.770 |
NH2 |
O |
||||||||||
5bwv | 1 | O15382 | 100.0 | 0.0 |
X-RAY |
2015-07-01 | ARG | A:308 | A:304 | 31.0 | 0.138 | -94.0 | -12.5 | 31.0 | 0.138 | 0.0 |
EDO HOH |
9.265 2.735 |
NH1 NH2 |
C1 O |
|||
ARG | B:308 | B:304 | 30.0 | 0.133 | -92.2 | -10.6 | 30.0 | 0.133 | 0.0 |
HOH |
2.762 |
NH2 |
O |
||||||||||
5bww | 1 | O15382 | 100.0 | 0.0 |
X-RAY |
2015-07-01 | ARG | A:308 | A:304 | 31.0 | 0.138 | -94.5 | -13.8 | 31.0 | 0.138 | 0.0 |
EDO HOH |
9.012 2.814 |
NH1 NH2 |
O2 O |
|||
ARG | B:308 | B:304 | 30.0 | 0.133 | -93.3 | -13.9 | 30.0 | 0.133 | 0.0 |
HOH |
2.879 |
NH2 |
O |
||||||||||
5bwx | 1 | O15382 | 100.0 | 0.0 |
X-RAY |
2015-07-01 | ARG | A:308 | A:304 | 32.0 | 0.142 | -94.2 | -7.6 | 32.0 | 0.142 | 0.0 |
HOH |
2.805 |
NH2 |
O |
|||
ARG | B:308 | B:304 | 32.0 | 0.142 | -86.8 | -7.8 | 32.0 | 0.142 | 0.0 |
EDO HOH |
8.327 2.987 |
N NH2 |
O2 O |
||||||||||
5cr5 | 1 | O15382 | 100.0 | 0.0 |
X-RAY |
2015-08-12 | ARG | A:308 | A:304 | 30.0 | 0.133 | -95.7 | -14.7 | 30.0 | 0.133 | 0.0 |
HOH |
2.785 |
NH2 |
O |
|||
ARG | B:308 | B:304 | 32.0 | 0.142 | -97.1 | -10.4 | 32.0 | 0.142 | 0.0 |
HOH |
2.979 |
NH2 |
O |
||||||||||
5hne | 1 | O15382 | 100.0 | 0.0 |
X-RAY |
2016-05-04 | ARG | A:308 | A:304 | 28.0 | 0.124 | -93.6 | -17.1 | 28.0 | 0.124 | 0.0 |
HOH |
2.644 |
NH2 |
O |
|||
ARG | B:308 | B:304 | 32.0 | 0.142 | -96.9 | -11.0 | 32.0 | 0.142 | 0.0 |
HOH |
2.717 |
NH2 |
O |
||||||||||
5i5s | 1 | O15382 | 100.0 | 0.0 |
X-RAY |
2016-03-23 | ARG | A:308 | A:304 | 31.0 | 0.138 | -94.0 | -13.6 | 31.0 | 0.138 | 0.0 |
HOH |
2.789 |
NH2 |
O |
|||
ARG | B:308 | B:304 | 31.0 | 0.138 | -86.0 | -12.0 | 31.0 | 0.138 | 0.0 |
HOH |
2.830 |
NH2 |
O |
||||||||||
5i5t | 1 | O15382 | 100.0 | 0.0 |
X-RAY |
2016-03-23 | ARG | A:308 | A:304 | 29.0 | 0.129 | -92.0 | -17.7 | 29.0 | 0.129 | 0.0 |
EDO HOH |
9.298 2.678 |
NH1 NH2 |
C1 O |
|||
ARG | B:308 | B:304 | 31.0 | 0.138 | -87.3 | -8.3 | 31.0 | 0.138 | 0.0 |
HOH |
2.768 |
NH1 |
O |
||||||||||
5i5u | 1 | O15382 | 100.0 | 0.0 |
X-RAY |
2016-03-23 | ARG | A:308 | A:304 | 32.0 | 0.142 | -98.2 | -17.7 | 32.0 | 0.142 | 0.0 |
EDO HOH |
6.807 2.749 |
NH2 NH2 |
O1 O |
|||
ARG | B:308 | B:304 | 31.0 | 0.138 | -91.2 | -5.2 | 31.0 | 0.138 | 0.0 |
HOH |
2.932 |
NH2 |
O |
||||||||||
5i5v | 1 | O15382 | 100.0 | 0.0 |
X-RAY |
2016-03-23 | ARG | A:308 | A:304 | 30.0 | 0.133 | -93.3 | -15.2 | 30.0 | 0.133 | 0.0 |
EDO HOH |
9.459 2.782 |
NH1 NH2 |
C2 O |
|||
ARG | B:308 | B:304 | 30.0 | 0.133 | -96.8 | -13.0 | 30.0 | 0.133 | 0.0 |
HOH |
2.911 |
NH2 |
O |
||||||||||
5i5w | 1 | O15382 | 100.0 | 0.0 |
X-RAY |
2016-03-23 | ARG | A:308 | A:304 | 32.0 | 0.142 | -93.0 | -13.3 | 32.0 | 0.142 | 0.0 |
HOH |
2.633 |
NH2 |
O |
|||
ARG | B:308 | B:304 | 31.0 | 0.138 | -90.0 | -15.1 | 31.0 | 0.138 | 0.0 |
HOH |
2.785 |
NH1 |
O |
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5i5x | 1 | O15382 | 100.0 | 0.0 |
X-RAY |
2016-03-23 | ARG | A:308 | A:304 | 32.0 | 0.142 | -93.6 | -14.5 | 32.0 | 0.142 | 0.0 |
EDO HOH |
9.362 2.659 |
NH1 NH2 |
O2 O |
|||
ARG | B:308 | B:304 | 29.0 | 0.129 | -91.8 | -15.0 | 29.0 | 0.129 | 0.0 |
GOL HOH |
7.977 2.852 |
N NH2 |
O3 O |
||||||||||
5i5y | 1 | O15382 | 100.0 | 0.0 |
X-RAY |
2016-03-23 | ARG | A:308 | A:304 | 32.0 | 0.142 | -92.5 | -13.4 | 32.0 | 0.142 | 0.0 |
HOH |
2.741 |
NH2 |
O |
|||
ARG | B:308 | B:304 | 30.0 | 0.133 | -91.8 | -14.5 | 30.0 | 0.133 | 0.0 |
HOH |
2.882 |
NH1 |
O |
||||||||||
5i60 | 1 | O15382 | 100.0 | 0.0 |
X-RAY |
2016-03-23 | ARG | A:308 | A:304 | 30.0 | 0.133 | -97.0 | -14.7 | 30.0 | 0.133 | 0.0 |
HOH |
2.863 |
NH2 |
O |
|||
ARG | B:308 | B:304 | 35.0 | 0.156 | -94.2 | -13.6 | 35.0 | 0.156 | 0.0 |
HOH |
2.752 |
NH2 |
O |
||||||||||
1ekf | 1 | O15382 | 99.73 | 0.0 |
X-RAY |
2001-03-08 | ARG | A:304 | A:304 | 30.0 | 0.133 | -91.9 | -17.2 | 30.0 | 0.133 | 0.0 |
HOH |
2.402 |
NH2 |
O |
|||
ARG | B:304 | B:304 | 24.0 | 0.107 | -99.0 | -17.5 | 24.0 | 0.107 | 0.0 |
HOH |
2.520 |
NH2 |
O |
||||||||||
1ekp | 1 | O15382 | 99.73 | 0.0 |
X-RAY |
2001-03-09 | ARG | A:304 | A:304 | 28.0 | 0.124 | -99.2 | -10.7 | 28.0 | 0.124 | 0.0 |
HOH |
3.174 |
O |
O |
|||
ARG | B:304 | B:304 | 31.0 | 0.138 | -94.4 | -8.1 | 31.0 | 0.138 | 0.0 |
HOH |
2.860 |
NH2 |
O |
||||||||||
1ekv | 1 | O15382 | 99.73 | 0.0 |
X-RAY |
2001-03-09 | ARG | A:304 | A:304 | 27.0 | 0.12 | -106.4 | -4.3 | 27.0 | 0.12 | 0.0 |
HOH |
3.085 |
NH1 |
O |
|||
ARG | B:304 | B:304 | 28.0 | 0.124 | -84.0 | -5.9 | 28.0 | 0.124 | 0.0 |
HOH |
2.288 |
NH2 |
O |
||||||||||
1kt8 | 1 | O15382 | 99.73 | 0.0 |
X-RAY |
2002-11-20 | ARG | A:304 | A:304 | 31.0 | 0.138 | -89.3 | -19.8 | 31.0 | 0.138 | 0.0 |
HOH |
8.336 |
O |
O |
|||
ARG | B:304 | B:804 | 26.0 | 0.116 | -84.7 | -16.5 | 26.0 | 0.116 | 0.0 |
HOH |
2.592 |
NH2 |
O |
||||||||||
1kta | 1 | O15382 | 99.73 | 0.0 |
X-RAY |
2002-11-20 | ARG | A:304 | A:304 | 29.0 | 0.129 | -95.3 | -8.5 | 29.0 | 0.129 | 0.0 |
HOH |
7.831 |
NH2 |
O |
|||
ARG | B:304 | B:804 | 28.0 | 0.124 | -90.2 | -14.3 | 28.0 | 0.124 | 0.0 |
HOH |
2.416 |
NH2 |
O |
||||||||||
2a1h | 1 | O15382 | 99.73 | 0.0 |
X-RAY |
2005-09-06 | ARG | A:304 | A:304 | 31.0 | 0.138 | -92.3 | -13.0 | 31.0 | 0.138 | 0.0 |
HOH |
2.485 |
NH2 |
O |
|||
ARG | B:304 | B:304 | 29.0 | 0.129 | -88.5 | -17.8 | 29.0 | 0.129 | 0.0 |
HOH |
2.504 |
NH2 |
O |
||||||||||
2hhf | 1 | O15382 | 99.73 | 0.0 |
X-RAY |
2006-10-24 | ARG | A:304 | A:304 | 31.0 | 0.138 | -97.6 | -12.1 | 31.0 | 0.138 | 0.0 |
HOH |
2.928 |
NH1 |
O |
|||
2hhf | 2 | O15382 | 99.73 | 0.0 |
X-RAY |
2006-10-24 | ARG | B:304 | B:804 | 30.0 | 0.133 | -87.7 | -13.7 | 30.0 | 0.133 | 0.0 |
HOH |
3.003 |
NH1 |
O |
|||
5mpr | 1 | O15382 | 99.73 | 0.0 |
X-RAY |
2017-07-19 | ARG | A:305 | A:304 | 30.0 | 0.133 | -93.5 | -11.7 | 30.0 | 0.133 | 0.0 |
HOH |
2.965 |
NH2 |
O |
|||
2hg8 | 1 | O15382 | 99.45 | 0.0 |
X-RAY |
2006-10-24 | ARG | A:304 | A:304 | 32.0 | 0.142 | -89.8 | -16.0 | 32.0 | 0.142 | 0.0 |
HOH |
8.065 |
NH2 |
O |
|||
ARG | B:304 | B:804 | 30.0 | 0.133 | -88.9 | -20.2 | 30.0 | 0.133 | 0.0 |
HOH |
2.985 |
NH1 |
O |
||||||||||
2hgx | 1 | O15382 | 99.45 | 0.0 |
X-RAY |
2006-10-24 | ARG | A:304 | A:304 | 31.0 | 0.138 | -92.8 | -13.0 | 31.0 | 0.138 | 0.0 |
HOH |
2.749 |
NH2 |
O |
|||
ARG | B:304 | B:804 | 30.0 | 0.133 | -86.8 | -16.0 | 30.0 | 0.133 | 0.0 |
HOH |
2.894 |
NH2 |
O |
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2hgw | 1 | O15382 | 99.45 | 0.0 |
X-RAY |
2006-10-24 | ARG | A:304 | A:304 | 30.0 | 0.133 | -93.3 | -13.2 | 30.0 | 0.133 | 0.0 |
HOH |
2.894 |
NH2 |
O |
|||
ARG | B:304 | B:804 | 36.0 | 0.16 | -92.9 | -14.3 | 36.0 | 0.16 | 0.0 |
HOH |
2.821 |
NH2 |
O |
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6prx | 1 | O15382 | 99.45 | 0.0 |
X-RAY |
2020-01-22 | ARG | A:322 | A:304 | 32.0 | 0.142 | -90.8 | -22.4 | 32.0 | 0.142 | 0.0 | |||||||
ARG | B:322 | B:304 | 28.0 | 0.124 | -90.9 | -22.9 | 28.0 | 0.124 | 0.0 | ||||||||||||||
2hdk | 1 | O15382 | 99.18 | 0.0 |
X-RAY |
2006-10-24 | ARG | A:304 | A:304 | 32.0 | 0.142 | -85.7 | -11.4 | 32.0 | 0.142 | 0.0 |
HOH |
2.898 |
NH2 |
O |
|||
ARG | B:304 | B:804 | 35.0 | 0.156 | -88.1 | -8.1 | 35.0 | 0.156 | 0.0 |
HOH |
2.951 |
NH2 |
O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-o15382-f1 | 1 | O15382 | 100.0 | 0.0 | ARG | A:331 | A:331 | 31.0 | 0.138 | -89.1 | -17.8 |