Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr19 | 49303027 | . | G | A | CCDS12735.1:NM_001190.3:c.600taC>taT_NP_001181.2:p.200Y>Y | Homo sapiens branched chain amino acid transaminase 2 (BCAT2), transcript variant a, mRNA. |
|---|---|---|---|---|---|---|---|
|
|
|
|
|
PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 5bwr | 1 | O15382 | 100.0 | 0.0 |
X-RAY |
2015-07-01 | TYR | A:177 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
| TYR | B:177 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
| 5bwt | 1 | O15382 | 100.0 | 0.0 |
X-RAY |
2015-07-01 | TYR | A:177 | A:173 | 115.0 | 0.5 | S | -70.1 | -53.0 | 91.0 | 0.396 | 0.104 |
B:O15382:0.104 |
4VS HOH |
2.664 2.910 |
OH OH |
O O |
|
| TYR | B:177 | B:173 | 113.0 | 0.491 | -92.1 | -45.7 | 89.0 | 0.387 | 0.104 |
A:O15382:0.104 |
4VS HOH |
2.553 3.050 |
OH N |
O O |
|||||||||
| 5bwu | 1 | O15382 | 100.0 | 0.0 |
X-RAY |
2015-07-01 | TYR | A:177 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
| TYR | B:177 | B:173 | 125.0 | 0.543 | -60.6 | -30.9 | 125.0 | 0.543 | 0.0 |
4VR EDO HOH |
4.159 3.001 3.281 |
OH CE1 OH |
C19 O1 O |
||||||||||
| 5bwv | 1 | O15382 | 100.0 | 0.0 |
X-RAY |
2015-07-01 | TYR | A:177 | A:173 | 138.0 | 0.6 | -154.2 | 360.0 | 130.0 | 0.565 | 0.035 |
B:O15382:0.035 |
775 EDO HOH |
3.058 2.753 2.934 |
OH OH OH |
N9 O2 O |
||
| TYR | B:177 | B:173 | 163.0 | 0.709 | -126.6 | 360.0 | 147.0 | 0.639 | 0.07 |
A:O15382:0.07 |
EDO 775 HOH |
3.188 2.903 2.765 |
OH OH OH |
O2 O7 O |
|||||||||
| 5bww | 1 | O15382 | 100.0 | 0.0 |
X-RAY |
2015-07-01 | TYR | A:177 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
| TYR | B:177 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
| 5bwx | 1 | O15382 | 100.0 | 0.0 |
X-RAY |
2015-07-01 | TYR | A:177 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
| TYR | B:177 | B:173 | 125.0 | 0.543 | S | -68.6 | -37.6 | 125.0 | 0.543 | 0.0 |
4W4 EDO HOH |
4.089 3.405 3.156 |
OH CE1 O |
C15 O1 O |
|||||||||
| 5cr5 | 1 | O15382 | 100.0 | 0.0 |
X-RAY |
2015-08-12 | TYR | A:177 | A:173 | 103.0 | 0.448 | S | -68.5 | -37.5 | 103.0 | 0.448 | 0.0 |
EL1 CL HOH |
3.292 5.279 2.437 |
OH CB OH |
C24 CL O |
||
| TYR | B:177 | B:173 | 108.0 | 0.47 | S | -69.3 | -39.4 | 108.0 | 0.47 | 0.0 |
EL1 CL HOH |
3.269 5.444 2.360 |
OH CB OH |
C24 CL O |
|||||||||
| 5hne | 1 | O15382 | 100.0 | 0.0 |
X-RAY |
2016-05-04 | TYR | A:177 | A:173 | 101.0 | 0.439 | S | -60.1 | -40.0 | 101.0 | 0.439 | 0.0 |
EL2 HOH |
3.256 2.362 |
OH OH |
C15 O |
||
| TYR | B:177 | B:173 | 107.0 | 0.465 | S | -58.0 | -37.8 | 107.0 | 0.465 | 0.0 |
EL2 HOH |
3.358 2.564 |
OH OH |
C15 O |
|||||||||
| 5i5s | 1 | O15382 | 100.0 | 0.0 |
X-RAY |
2016-03-23 | TYR | A:177 | A:173 | 96.0 | 0.417 | S | -78.9 | -53.1 | 71.0 | 0.309 | 0.108 |
B:O15382:0.109 |
NVU HOH |
4.049 2.392 |
CE1 OH |
CE1 O |
|
| TYR | B:177 | B:173 | 146.0 | 0.635 | -132.1 | 360.0 | 129.0 | 0.561 | 0.074 |
A:O15382:0.074 |
NVU HOH |
4.556 2.497 |
CE2 OH |
CE1 O |
|||||||||
| 5i5t | 1 | O15382 | 100.0 | 0.0 |
X-RAY |
2016-03-23 | TYR | A:177 | A:173 | 94.0 | 0.409 | S | -71.7 | -41.5 | 68.0 | 0.296 | 0.113 |
B:O15382:0.113 |
PLP 67X HOH |
9.766 3.127 2.284 |
OH CE1 OH |
O3 C3 O |
|
| TYR | B:177 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
| 5i5u | 1 | O15382 | 100.0 | 0.0 |
X-RAY |
2016-03-23 | TYR | A:177 | A:173 | 95.0 | 0.413 | S | -87.6 | -55.4 | 70.0 | 0.304 | 0.109 |
B:O15382:0.109 |
PLP 67Y HOH |
9.425 3.612 2.354 |
OH CE1 OH |
O3 C7 O |
|
| TYR | B:177 | B:173 | 102.0 | 0.443 | -116.5 | -32.4 | 77.0 | 0.335 | 0.108 |
A:O15382:0.109 |
PLP 67Y HOH |
9.542 3.641 2.523 |
OH CE1 OH |
O3 C7 O |
|||||||||
| 5i5v | 1 | O15382 | 100.0 | 0.0 |
X-RAY |
2016-03-23 | TYR | A:177 | A:173 | 91.0 | 0.396 | S | -66.2 | -36.0 | 91.0 | 0.396 | 0.0 |
68A EDO HOH |
3.383 6.295 2.769 |
CD2 CE2 O |
C7 O2 O |
||
| TYR | B:177 | B:173 | 90.0 | 0.391 | S | -69.0 | -38.9 | 90.0 | 0.391 | 0.0 |
68A EDO HOH |
3.385 5.913 3.192 |
CD2 CE2 N |
C7 O1 O |
|||||||||
| 5i5w | 1 | O15382 | 100.0 | 0.0 |
X-RAY |
2016-03-23 | TYR | A:177 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
| TYR | B:177 | B:173 | 114.0 | 0.496 | -55.8 | -57.9 | 114.0 | 0.496 | 0.0 |
CL 68B HOH |
7.614 3.816 2.505 |
CE1 CE1 OH |
CL N8 O |
||||||||||
| 5i5x | 1 | O15382 | 100.0 | 0.0 |
X-RAY |
2016-03-23 | TYR | A:177 | A:173 | 108.0 | 0.47 | -75.3 | -37.2 | 108.0 | 0.47 | 0.0 |
68C CL HOH |
3.482 5.163 2.404 |
CD2 CB OH |
C7 CL O |
|||
| TYR | B:177 | B:173 | 100.0 | 0.435 | S | -67.6 | -39.7 | 100.0 | 0.435 | 0.0 |
68C CL HOH |
3.419 5.111 2.540 |
CD2 CB OH |
C7 CL O |
|||||||||
| 5i5y | 1 | O15382 | 100.0 | 0.0 |
X-RAY |
2016-03-23 | TYR | A:177 | A:173 | 103.0 | 0.448 | S | -56.7 | -48.7 | 103.0 | 0.448 | 0.0 |
68D EDO HOH |
3.374 2.937 2.620 |
CD2 CA OH |
C7 O1 O |
||
| TYR | B:177 | B:173 | 98.0 | 0.426 | S | -71.9 | -35.0 | 98.0 | 0.426 | 0.0 |
68D CL HOH |
3.600 4.999 2.569 |
CD2 CB OH |
C7 CL O |
|||||||||
| 5i60 | 1 | O15382 | 100.0 | 0.0 |
X-RAY |
2016-03-23 | TYR | A:177 | A:173 | 109.0 | 0.474 | S | -62.7 | -43.8 | 109.0 | 0.474 | 0.0 |
67W HOH |
3.671 2.556 |
N N |
N1 O |
||
| TYR | B:177 | B:173 | 107.0 | 0.465 | S | -66.9 | -46.3 | 107.0 | 0.465 | 0.0 |
67W HOH |
3.542 3.192 |
N O |
N1 O |
|||||||||
| 1ekf | 1 | O15382 | 99.73 | 0.0 |
X-RAY |
2001-03-08 | TYR | A:173 | A:173 | 162.0 | 0.704 | T | 15.6 | -90.1 | 162.0 | 0.704 | 0.0 |
HOH |
2.880 |
CD1 |
O |
||
| TYR | B:173 | B:173 | 122.0 | 0.53 | S | -44.3 | -37.1 | 122.0 | 0.53 | 0.0 |
HOH |
3.336 |
CD1 |
O |
|||||||||
| 1ekp | 1 | O15382 | 99.73 | 0.0 |
X-RAY |
2001-03-09 | TYR | A:173 | A:173 | 97.0 | 0.422 | S | -62.9 | -166.4 | 97.0 | 0.422 | 0.0 |
HOH |
2.848 |
OH |
O |
||
| TYR | B:173 | B:173 | 103.0 | 0.448 | S | -64.0 | -43.6 | 103.0 | 0.448 | 0.0 |
HOH |
3.329 |
CE2 |
O |
|||||||||
| 1ekv | 1 | O15382 | 99.73 | 0.0 |
X-RAY |
2001-03-09 | TYR | A:173 | A:173 | 124.0 | 0.539 | S | -106.3 | -24.8 | 124.0 | 0.539 | 0.0 |
TRS HOH |
9.234 2.887 |
OH OH |
C3 O |
||
| TYR | B:173 | B:173 | 114.0 | 0.496 | S | -111.7 | -22.6 | 114.0 | 0.496 | 0.0 |
HOH |
3.463 |
CE2 |
O |
|||||||||
| 1kt8 | 1 | O15382 | 99.73 | 0.0 |
X-RAY |
2002-11-20 | TYR | A:173 | A:173 | 129.0 | 0.561 | -154.4 | 360.0 | 129.0 | 0.561 | 0.0 |
ILP HOH |
8.922 3.126 |
CE1 N |
CD1 O |
|||
| TYR | B:173 | B:673 | 100.0 | 0.435 | S | -55.9 | -35.3 | 100.0 | 0.435 | 0.0 |
ILP HOH |
8.459 3.770 |
CE1 OH |
OXT O |
|||||||||
| 1kta | 1 | O15382 | 99.73 | 0.0 |
X-RAY |
2002-11-20 | TYR | A:173 | A:173 | 112.0 | 0.487 | S | -68.6 | 93.7 | 112.0 | 0.487 | 0.0 |
KIV HOH |
7.920 3.050 |
CE1 N |
C5 O |
||
| TYR | B:173 | B:673 | 105.0 | 0.457 | S | -46.0 | -47.3 | 105.0 | 0.457 | 0.0 |
HOH |
3.968 |
OH |
O |
|||||||||
| 2a1h | 1 | O15382 | 99.73 | 0.0 |
X-RAY |
2005-09-06 | TYR | A:173 | A:173 | 109.0 | 0.474 | S | -61.8 | -43.9 | 109.0 | 0.474 | 0.0 |
GBN HOH |
7.234 3.602 |
CE1 CE1 |
OB O |
||
| TYR | B:173 | B:173 | 105.0 | 0.457 | S | -70.3 | -33.7 | 105.0 | 0.457 | 0.0 |
GBN HOH |
7.305 3.125 |
CE1 N |
OB O |
|||||||||
| 2hhf | 1 | O15382 | 99.73 | 0.0 |
X-RAY |
2006-10-24 | TYR | A:173 | A:173 | 102.0 | 0.443 | S | -71.7 | -42.1 | 102.0 | 0.443 | 0.0 |
HOH |
3.202 |
N |
O |
||
| 2hhf | 2 | O15382 | 99.73 | 0.0 |
X-RAY |
2006-10-24 | TYR | B:173 | B:673 | 92.0 | 0.4 | S | -71.1 | -37.1 | 92.0 | 0.4 | 0.0 |
EPE HOH |
3.641 3.019 |
CE1 N |
O1S O |
||
| 5mpr | 1 | O15382 | 99.73 | 0.0 |
X-RAY |
2017-07-19 | TYR | A:174 | A:173 | 107.0 | 0.465 | S | -97.5 | -30.5 | 107.0 | 0.465 | 0.0 |
EDO HOH |
8.075 4.376 |
OH CE1 |
O1 O |
||
| 2hg8 | 1 | O15382 | 99.45 | 0.0 |
X-RAY |
2006-10-24 | TYR | A:173 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
| TYR | B:173 | B:673 | 103.0 | 0.448 | S | -68.7 | -35.9 | 103.0 | 0.448 | 0.0 |
MLE HOH |
6.549 2.796 |
CE1 OH |
CN O |
|||||||||
| 2hgx | 1 | O15382 | 99.45 | 0.0 |
X-RAY |
2006-10-24 | TYR | A:173 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
| TYR | B:173 | B:673 | 99.0 | 0.43 | S | -68.9 | -33.1 | 99.0 | 0.43 | 0.0 |
ACY HOH |
9.744 2.969 |
CE1 N |
O O |
|||||||||
| 2hgw | 1 | O15382 | 99.45 | 0.0 |
X-RAY |
2006-10-24 | TYR | A:173 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
| TYR | B:173 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
| 6prx | 1 | O15382 | 99.45 | 0.0 |
X-RAY |
2020-01-22 | TYR | A:191 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
| TYR | B:191 | B:173 | 113.0 | 0.491 | S | -62.0 | -28.5 | 113.0 | 0.491 | 0.0 | |||||||||||||
| 2hdk | 1 | O15382 | 99.18 | 0.0 |
X-RAY |
2006-10-24 | TYR | A:173 | A:173 | 110.0 | 0.478 | S | -61.8 | -47.7 | 110.0 | 0.478 | 0.0 |
ACY HOH |
7.930 4.146 |
CE1 CB |
OXT O |
||
| TYR | B:173 | B:673 | 113.0 | 0.491 | S | 94.9 | 90.9 | 113.0 | 0.491 | 0.0 |
HOH |
3.434 |
O |
O |
|||||||||
AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-o15382-f1 | 1 | O15382 | 100.0 | 0.0 | TYR | A:200 | A:200 | 94.0 | 0.409 | S | -81.0 | -31.3 | |