Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr19 | 49303521 | . | C | A | CCDS12735.1:NM_001190.3:c.334Gac>Tac_NP_001181.2:p.112D>Y | Homo sapiens branched chain amino acid transaminase 2 (BCAT2), transcript variant a, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
5bwr | 1 | O15382 | 100.0 | 0.0 |
X-RAY |
2015-07-01 | ASP | A:89 | A:85 | 86.0 | 0.573 | T | -68.5 | 12.3 | 86.0 | 0.573 | 0.0 |
HOH |
6.249 |
OD2 |
O |
||
ASP | B:89 | B:85 | 101.0 | 0.673 | T | -66.6 | 20.7 | 101.0 | 0.673 | 0.0 |
HOH |
3.790 |
OD1 |
O |
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5bwt | 1 | O15382 | 100.0 | 0.0 |
X-RAY |
2015-07-01 | ASP | A:89 | A:85 | 103.0 | 0.687 | T | -75.7 | 12.6 | 103.0 | 0.687 | 0.0 |
HOH |
2.781 |
OD1 |
O |
||
ASP | B:89 | B:85 | 102.0 | 0.68 | T | -58.2 | 9.5 | 102.0 | 0.68 | 0.0 |
HOH |
3.521 |
OD1 |
O |
|||||||||
5bwu | 1 | O15382 | 100.0 | 0.0 |
X-RAY |
2015-07-01 | ASP | A:89 | A:85 | 104.0 | 0.693 | T | -70.1 | 11.4 | 104.0 | 0.693 | 0.0 |
HOH |
2.762 |
OD1 |
O |
||
ASP | B:89 | B:85 | 100.0 | 0.667 | T | -64.7 | 6.2 | 100.0 | 0.667 | 0.0 |
HOH |
3.535 |
OD2 |
O |
|||||||||
5bwv | 1 | O15382 | 100.0 | 0.0 |
X-RAY |
2015-07-01 | ASP | A:89 | A:85 | 118.0 | 0.787 | T | -85.3 | 12.2 | 118.0 | 0.787 | 0.0 |
EDO HOH |
2.640 2.796 |
OD1 OD2 |
O1 O |
||
ASP | B:89 | B:85 | 109.0 | 0.727 | T | -77.5 | 3.9 | 109.0 | 0.727 | 0.0 |
HOH |
2.312 |
OD2 |
O |
|||||||||
5bww | 1 | O15382 | 100.0 | 0.0 |
X-RAY |
2015-07-01 | ASP | A:89 | A:85 | 97.0 | 0.647 | T | -68.7 | 1.8 | 97.0 | 0.647 | 0.0 |
HOH |
4.198 |
OD1 |
O |
||
ASP | B:89 | B:85 | 98.0 | 0.653 | T | -72.0 | 10.6 | 98.0 | 0.653 | 0.0 |
HOH |
4.699 |
N |
O |
|||||||||
5bwx | 1 | O15382 | 100.0 | 0.0 |
X-RAY |
2015-07-01 | ASP | A:89 | A:85 | 119.0 | 0.793 | T | -79.1 | 16.6 | 119.0 | 0.793 | 0.0 |
HOH |
2.448 |
OD1 |
O |
||
ASP | B:89 | B:85 | 109.0 | 0.727 | T | -72.5 | 7.1 | 109.0 | 0.727 | 0.0 |
HOH |
2.375 |
OD1 |
O |
|||||||||
5cr5 | 1 | O15382 | 100.0 | 0.0 |
X-RAY |
2015-08-12 | ASP | A:89 | A:85 | 122.0 | 0.813 | T | -78.8 | 12.2 | 122.0 | 0.813 | 0.0 |
HOH |
2.425 |
OD2 |
O |
||
ASP | B:89 | B:85 | 105.0 | 0.7 | T | -73.4 | 5.8 | 105.0 | 0.7 | 0.0 |
HOH |
2.884 |
OD2 |
O |
|||||||||
5hne | 1 | O15382 | 100.0 | 0.0 |
X-RAY |
2016-05-04 | ASP | A:89 | A:85 | 94.0 | 0.627 | T | -66.9 | 9.8 | 94.0 | 0.627 | 0.0 |
HOH |
2.870 |
OD1 |
O |
||
ASP | B:89 | B:85 | 90.0 | 0.6 | T | -73.8 | 3.6 | 90.0 | 0.6 | 0.0 |
HOH |
2.855 |
OD2 |
O |
|||||||||
5i5s | 1 | O15382 | 100.0 | 0.0 |
X-RAY |
2016-03-23 | ASP | A:89 | A:85 | 96.0 | 0.64 | T | -64.3 | 1.8 | 96.0 | 0.64 | 0.0 |
HOH |
5.334 |
OD1 |
O |
||
ASP | B:89 | B:85 | 101.0 | 0.673 | T | -59.8 | 10.4 | 101.0 | 0.673 | 0.0 |
HOH |
3.474 |
OD2 |
O |
|||||||||
5i5t | 1 | O15382 | 100.0 | 0.0 |
X-RAY |
2016-03-23 | ASP | A:89 | A:85 | 96.0 | 0.64 | T | -72.8 | 2.4 | 96.0 | 0.64 | 0.0 |
HOH |
3.085 |
O |
O |
||
ASP | B:89 | B:85 | 104.0 | 0.693 | T | -63.1 | 24.4 | 104.0 | 0.693 | 0.0 |
HOH |
4.884 |
N |
O |
|||||||||
5i5u | 1 | O15382 | 100.0 | 0.0 |
X-RAY |
2016-03-23 | ASP | A:89 | A:85 | 93.0 | 0.62 | T | -72.7 | -2.4 | 93.0 | 0.62 | 0.0 |
HOH |
3.694 |
O |
O |
||
ASP | B:89 | B:85 | 103.0 | 0.687 | T | -67.8 | 24.0 | 103.0 | 0.687 | 0.0 |
HOH |
4.951 |
N |
O |
|||||||||
5i5v | 1 | O15382 | 100.0 | 0.0 |
X-RAY |
2016-03-23 | ASP | A:89 | A:85 | 96.0 | 0.64 | T | -61.8 | -0.2 | 96.0 | 0.64 | 0.0 |
HOH |
5.097 |
N |
O |
||
ASP | B:89 | B:85 | 99.0 | 0.66 | T | -67.4 | 1.7 | 99.0 | 0.66 | 0.0 |
HOH |
3.072 |
OD2 |
O |
|||||||||
5i5w | 1 | O15382 | 100.0 | 0.0 |
X-RAY |
2016-03-23 | ASP | A:89 | A:85 | 110.0 | 0.733 | T | -82.9 | 10.3 | 110.0 | 0.733 | 0.0 |
HOH |
2.878 |
OD1 |
O |
||
ASP | B:89 | B:85 | 91.0 | 0.607 | T | -59.4 | 15.5 | 91.0 | 0.607 | 0.0 |
HOH |
3.145 |
OD1 |
O |
|||||||||
5i5x | 1 | O15382 | 100.0 | 0.0 |
X-RAY |
2016-03-23 | ASP | A:89 | A:85 | 121.0 | 0.807 | T | -81.7 | 13.0 | 121.0 | 0.807 | 0.0 |
HOH |
2.476 |
N |
O |
||
ASP | B:89 | B:85 | 104.0 | 0.693 | T | -75.6 | 19.9 | 104.0 | 0.693 | 0.0 |
HOH |
2.929 |
OD2 |
O |
|||||||||
5i5y | 1 | O15382 | 100.0 | 0.0 |
X-RAY |
2016-03-23 | ASP | A:89 | A:85 | 96.0 | 0.64 | T | -65.9 | -1.0 | 96.0 | 0.64 | 0.0 |
HOH |
3.182 |
O |
O |
||
ASP | B:89 | B:85 | 99.0 | 0.66 | T | -70.3 | 9.2 | 99.0 | 0.66 | 0.0 |
EDO HOH |
2.770 3.445 |
OD1 OD2 |
O1 O |
|||||||||
5i60 | 1 | O15382 | 100.0 | 0.0 |
X-RAY |
2016-03-23 | ASP | A:89 | A:85 | 92.0 | 0.613 | T | -68.4 | 14.2 | 92.0 | 0.613 | 0.0 |
HOH |
5.053 |
OD2 |
O |
||
ASP | B:89 | B:85 | 95.0 | 0.633 | T | -73.5 | 2.6 | 95.0 | 0.633 | 0.0 |
HOH |
3.057 |
OD2 |
O |
|||||||||
1ekf | 1 | O15382 | 99.73 | 0.0 |
X-RAY |
2001-03-08 | ASP | A:85 | A:85 | 81.0 | 0.54 | T | -58.9 | -15.0 | 81.0 | 0.54 | 0.0 |
HOH |
5.568 |
OD2 |
O |
||
ASP | B:85 | B:85 | 69.0 | 0.46 | T | -64.2 | 12.4 | 69.0 | 0.46 | 0.0 |
HOH |
4.692 |
O |
O |
|||||||||
1ekp | 1 | O15382 | 99.73 | 0.0 |
X-RAY |
2001-03-09 | ASP | A:85 | A:85 | 96.0 | 0.64 | T | -70.0 | 14.4 | 96.0 | 0.64 | 0.0 |
HOH |
9.058 |
OD1 |
O |
||
ASP | B:85 | B:85 | 74.0 | 0.493 | T | -80.6 | 15.3 | 74.0 | 0.493 | 0.0 |
HOH |
5.120 |
OD2 |
O |
|||||||||
1ekv | 1 | O15382 | 99.73 | 0.0 |
X-RAY |
2001-03-09 | ASP | A:85 | A:85 | 109.0 | 0.727 | T | -91.0 | 24.0 | 109.0 | 0.727 | 0.0 |
HOH |
2.421 |
OD1 |
O |
||
ASP | B:85 | B:85 | 88.0 | 0.587 | T | -91.0 | 12.5 | 88.0 | 0.587 | 0.0 |
HOH |
5.901 |
OD1 |
O |
|||||||||
1kt8 | 1 | O15382 | 99.73 | 0.0 |
X-RAY |
2002-11-20 | ASP | A:85 | A:85 | 87.0 | 0.58 | T | -56.3 | -31.0 | 87.0 | 0.58 | 0.0 |
HOH |
5.717 |
OD2 |
O |
||
ASP | B:85 | B:585 | 105.0 | 0.7 | S | 64.0 | 110.4 | 105.0 | 0.7 | 0.0 |
HOH |
6.597 |
O |
O |
|||||||||
1kta | 1 | O15382 | 99.73 | 0.0 |
X-RAY |
2002-11-20 | ASP | A:85 | A:85 | 79.0 | 0.527 | T | -63.8 | -0.1 | 79.0 | 0.527 | 0.0 |
HOH |
5.600 |
OD2 |
O |
||
ASP | B:85 | B:585 | 95.0 | 0.633 | T | 122.6 | -4.4 | 95.0 | 0.633 | 0.0 |
HOH |
7.055 |
OD1 |
O |
|||||||||
2a1h | 1 | O15382 | 99.73 | 0.0 |
X-RAY |
2005-09-06 | ASP | A:85 | A:85 | 106.0 | 0.707 | T | -85.6 | 19.4 | 106.0 | 0.707 | 0.0 |
HOH |
6.601 |
OD1 |
O |
||
ASP | B:85 | B:85 | 118.0 | 0.787 | T | -86.3 | 14.1 | 118.0 | 0.787 | 0.0 |
HOH |
2.548 |
OD1 |
O |
|||||||||
2hhf | 1 | O15382 | 99.73 | 0.0 |
X-RAY |
2006-10-24 | ASP | A:85 | A:85 | 90.0 | 0.6 | T | -82.2 | 10.1 | 90.0 | 0.6 | 0.0 |
HOH |
5.583 |
OD1 |
O |
||
2hhf | 2 | O15382 | 99.73 | 0.0 |
X-RAY |
2006-10-24 | ASP | B:85 | B:585 | 103.0 | 0.687 | T | -149.6 | 12.6 | 103.0 | 0.687 | 0.0 |
HOH |
6.336 |
OD1 |
O |
||
5mpr | 1 | O15382 | 99.73 | 0.0 |
X-RAY |
2017-07-19 | ASP | A:86 | A:85 | 109.0 | 0.727 | T | -91.5 | 5.4 | 109.0 | 0.727 | 0.0 |
HOH |
2.469 |
OD1 |
O |
||
2hg8 | 1 | O15382 | 99.45 | 0.0 |
X-RAY |
2006-10-24 | ASP | A:85 | A:85 | 90.0 | 0.6 | T | -85.9 | 4.4 | 90.0 | 0.6 | 0.0 |
HOH |
7.187 |
O |
O |
||
ASP | B:85 | B:585 | 113.0 | 0.753 | T | -93.1 | 20.5 | 113.0 | 0.753 | 0.0 |
HOH |
2.889 |
OD1 |
O |
|||||||||
2hgx | 1 | O15382 | 99.45 | 0.0 |
X-RAY |
2006-10-24 | ASP | A:85 | A:85 | 115.0 | 0.767 | T | -87.1 | 16.5 | 115.0 | 0.767 | 0.0 |
HOH |
2.893 |
O |
O |
||
ASP | B:85 | B:585 | 120.0 | 0.8 | T | -93.2 | 14.5 | 120.0 | 0.8 | 0.0 |
HOH |
2.588 |
OD1 |
O |
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2hgw | 1 | O15382 | 99.45 | 0.0 |
X-RAY |
2006-10-24 | ASP | A:85 | A:85 | 103.0 | 0.687 | T | -75.6 | 7.8 | 103.0 | 0.687 | 0.0 | ||||||
ASP | B:85 | B:585 | 99.0 | 0.66 | T | -81.8 | 8.8 | 99.0 | 0.66 | 0.0 |
HOH |
4.191 |
OD1 |
O |
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6prx | 1 | O15382 | 99.45 | 0.0 |
X-RAY |
2020-01-22 | ASP | A:103 | A:85 | 106.0 | 0.707 | T | -69.3 | -5.7 | 106.0 | 0.707 | 0.0 | ||||||
ASP | B:103 | B:85 | 96.0 | 0.64 | T | -68.7 | -5.6 | 96.0 | 0.64 | 0.0 | |||||||||||||
2hdk | 1 | O15382 | 99.18 | 0.0 |
X-RAY |
2006-10-24 | ASP | A:85 | A:85 | 87.0 | 0.58 | T | -79.7 | 16.4 | 87.0 | 0.58 | 0.0 |
HOH |
5.404 |
OD2 |
O |
||
ASP | B:85 | B:585 | 83.0 | 0.553 | T | -84.7 | 17.4 | 83.0 | 0.553 | 0.0 |
HOH |
5.613 |
OD1 |
O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-o15382-f1 | 1 | O15382 | 100.0 | 0.0 | ASP | A:112 | A:112 | 93.0 | 0.62 | T | -77.5 | 5.9 |