Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 49309839 . G A CCDS12735.1:NM_001190.3:c.235Cga>Tga_NP_001181.2:p.79R>* Homo sapiens branched chain amino acid transaminase 2 (BCAT2), transcript variant a, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5bwr 1 O15382 100.0 0.0 X-RAY
 2015-07-01 ARG A:56 A:52 65.0 0.289 E -123.7 137.6 65.0 0.289 0.0 EDO
HOH
 7.994
3.806
 CD
CD
 O2
O
ARG B:56 B:52 75.0 0.333 E -156.2 144.4 75.0 0.333 0.0 EDO
HOH
 3.586
3.576
 NH2
NH2
 O1
O
5bwt 1 O15382 100.0 0.0 X-RAY
 2015-07-01 ARG A:56 A:52 72.0 0.32 E -130.1 136.4 72.0 0.32 0.0 EDO
HOH
 8.879
5.466
 CD
NH2
 C2
O
ARG B:56 B:52 74.0 0.329 E -151.6 149.3 74.0 0.329 0.0 EDO
HOH
 3.854
3.356
 NH2
NE
 O1
O
5bwu 1 O15382 100.0 0.0 X-RAY
 2015-07-01 ARG A:56 A:52 70.0 0.311 E -131.1 143.9 70.0 0.311 0.0 EDO
HOH
 8.153
4.531
 CD
NH2
 O2
O
ARG B:56 B:52 73.0 0.324 E -144.4 146.3 73.0 0.324 0.0 EDO
HOH
 3.971
2.766
 NH2
NH2
 O1
O
5bwv 1 O15382 100.0 0.0 X-RAY
 2015-07-01 ARG A:56 A:52 73.0 0.324 E -138.3 130.6 73.0 0.324 0.0 HOH
 3.555
 NH1
 O
ARG B:56 B:52 73.0 0.324 E -136.0 141.6 73.0 0.324 0.0 EDO
HOH
 3.329
2.908
 NH2
NH2
 O1
O
5bww 1 O15382 100.0 0.0 X-RAY
 2015-07-01 ARG A:56 A:52 70.0 0.311 E -131.9 137.3 70.0 0.311 0.0 EDO
HOH
 8.909
3.304
 CD
CD
 O2
O
ARG B:56 B:52 70.0 0.311 E -146.8 140.2 70.0 0.311 0.0 DMS
EDO
EDO
HOH
 4.044
8.146
4.244
2.628
 NH2
CB
NE
NH2
 C1
O1
O1
O
5bwx 1 O15382 100.0 0.0 X-RAY
 2015-07-01 ARG A:56 A:52 72.0 0.32 E -142.0 127.2 72.0 0.32 0.0 EDO
HOH
 9.842
4.453
 CD
NH2
 O2
O
ARG B:56 B:52 73.0 0.324 E -141.2 144.4 73.0 0.324 0.0 DMS
HOH
 4.115
2.996
 NH2
NH2
 C2
O
5cr5 1 O15382 100.0 0.0 X-RAY
 2015-08-12 ARG A:56 A:52 77.0 0.342 E -141.9 144.5 77.0 0.342 0.0 EDO
HOH
 9.288
2.776
 CD
NH1
 C2
O
ARG B:56 B:52 73.0 0.324 E -134.4 144.6 73.0 0.324 0.0 DMS
HOH
 3.906
2.871
 NH2
NH1
 C2
O
5hne 1 O15382 100.0 0.0 X-RAY
 2016-05-04 ARG A:56 A:52 69.0 0.307 E -135.3 144.7 69.0 0.307 0.0 EDO
EDO
HOH
 5.339
8.491
5.331
 NH1
CD
NH2
 O1
O2
O
ARG B:56 B:52 68.0 0.302 E -143.3 134.0 68.0 0.302 0.0 GOL
HOH
 3.477
2.569
 NH2
NH2
 O1
O
5i5s 1 O15382 100.0 0.0 X-RAY
 2016-03-23 ARG A:56 A:52 61.0 0.271 E -137.9 144.2 61.0 0.271 0.0 EDO
HOH
 8.450
3.194
 CD
CD
 O2
O
ARG B:56 B:52 73.0 0.324 E -142.7 144.3 73.0 0.324 0.0 DMS
HOH
 3.584
2.432
 NH2
NH2
 C2
O
5i5t 1 O15382 100.0 0.0 X-RAY
 2016-03-23 ARG A:56 A:52 83.0 0.369 E -138.8 146.9 83.0 0.369 0.0 EDO
HOH
 8.317
4.044
 CD
CD
 O2
O
ARG B:56 B:52 71.0 0.316 E -143.2 144.5 71.0 0.316 0.0 EDO
HOH
 4.895
2.690
 NH2
NH1
 C1
O
5i5u 1 O15382 100.0 0.0 X-RAY
 2016-03-23 ARG A:56 A:52 72.0 0.32 E -137.8 143.2 72.0 0.32 0.0 HOH
 4.030
 CD
 O
ARG B:56 B:52 67.0 0.298 E -149.2 143.1 67.0 0.298 0.0 EDO
HOH
 4.750
2.920
 NH2
NH2
 C2
O
5i5v 1 O15382 100.0 0.0 X-RAY
 2016-03-23 ARG A:56 A:52 63.0 0.28 E -138.9 143.2 63.0 0.28 0.0 EDO
HOH
 8.736
4.688
 CD
NH2
 O2
O
ARG B:56 B:52 73.0 0.324 E -145.6 142.9 73.0 0.324 0.0 EDO
HOH
 3.666
2.594
 NH2
NH2
 O1
O
5i5w 1 O15382 100.0 0.0 X-RAY
 2016-03-23 ARG A:56 A:52 72.0 0.32 E -121.2 133.9 72.0 0.32 0.0 EDO
HOH
 8.478
4.782
 CD
NH2
 O2
O
ARG B:56 B:52 68.0 0.302 E -145.2 147.2 68.0 0.302 0.0 EDO
HOH
 4.989
3.078
 NH2
NH2
 C1
O
5i5x 1 O15382 100.0 0.0 X-RAY
 2016-03-23 ARG A:56 A:52 77.0 0.342 E -139.5 143.7 77.0 0.342 0.0 EDO
EDO
HOH
 8.474
4.274
3.021
 CD
NH1
NH1
 O2
O1
O
ARG B:56 B:52 77.0 0.342 E -139.2 141.1 77.0 0.342 0.0 EDO
HOH
 3.158
2.749
 NH2
NH2
 O1
O
5i5y 1 O15382 100.0 0.0 X-RAY
 2016-03-23 ARG A:56 A:52 48.0 0.213 E -138.9 141.9 48.0 0.213 0.0 EDO
HOH
 3.621
2.951
 NH2
NH2
 O1
O
ARG B:56 B:52 76.0 0.338 E -136.3 141.8 76.0 0.338 0.0 EDO
HOH
 3.439
2.830
 NH2
NH1
 O1
O
5i60 1 O15382 100.0 0.0 X-RAY
 2016-03-23 ARG A:56 A:52 65.0 0.289 E -139.2 142.4 65.0 0.289 0.0 EDO
HOH
 8.214
2.622
 CD
NH2
 O2
O
ARG B:56 B:52 74.0 0.329 E -142.6 139.3 74.0 0.329 0.0 EDO
HOH
 3.500
2.454
 NH2
NH2
 O1
O
1ekf 1 O15382 99.73 0.0 X-RAY
 2001-03-08 ARG A:52 A:52 54.0 0.24 E -147.6 134.3 54.0 0.24 0.0 HOH
 2.711
 NE
 O
ARG B:52 B:52 56.0 0.249 E -147.4 134.4 56.0 0.249 0.0 HOH
 4.507
 NH2
 O
1ekp 1 O15382 99.73 0.0 X-RAY
 2001-03-09 ARG A:52 A:52 42.0 0.187 E -142.7 140.2 42.0 0.187 0.0 HOH
 3.354
 NH1
 O
ARG B:52 B:52 67.0 0.298 E -142.1 140.5 67.0 0.298 0.0 HOH
 3.399
 NH1
 O
1ekv 1 O15382 99.73 0.0 X-RAY
 2001-03-09 ARG A:52 A:52 58.0 0.258 E -150.5 135.1 58.0 0.258 0.0 HOH
 3.804
 NH1
 O
ARG B:52 B:52 75.0 0.333 E -149.5 135.6 75.0 0.333 0.0 HOH
 3.326
 CD
 O
1kt8 1 O15382 99.73 0.0 X-RAY
 2002-11-20 ARG A:52 A:52 73.0 0.324 E -143.7 130.9 73.0 0.324 0.0 HOH
 5.675
 NE
 O
ARG B:52 B:552 52.0 0.231 169.9 -72.1 52.0 0.231 0.0 ACY
 7.270
 NH2
 OXT
1kta 1 O15382 99.73 0.0 X-RAY
 2002-11-20 ARG A:52 A:52 62.0 0.276 E -140.0 136.9 62.0 0.276 0.0 HOH
 4.910
 NH2
 O
ARG B:52 B:552 50.0 0.222 E -148.4 139.8 50.0 0.222 0.0 HOH
 5.568
 N
 O
2a1h 1 O15382 99.73 0.0 X-RAY
 2005-09-06 ARG A:52 A:52 47.0 0.209 E -139.7 141.4 47.0 0.209 0.0 HOH
 3.278
 NH2
 O
ARG B:52 B:52 72.0 0.32 E -140.4 138.5 72.0 0.32 0.0 ACY
HOH
 4.087
3.402
 NH2
NH1
 CH3
O
2hhf 1 O15382 99.73 0.0 X-RAY
 2006-10-24 ARG A:52 A:52 87.0 0.387 E -121.0 131.6 87.0 0.387 0.0 HOH
 5.052
 CG
 O
2hhf 2 O15382 99.73 0.0 X-RAY
 2006-10-24 ARG B:52 B:552 97.0 0.431 106.8 -41.3 97.0 0.431 0.0 HOH
 5.468
 NH1
 O
5mpr 1 O15382 99.73 0.0 X-RAY
 2017-07-19 ARG A:53 A:52 75.0 0.333 E -138.5 137.7 75.0 0.333 0.0 EDO
HOH
 3.894
2.903
 NH2
NH2
 O2
O
2hg8 1 O15382 99.45 0.0 X-RAY
 2006-10-24 ARG A:52 A:52 36.0 0.16 E -122.2 136.8 36.0 0.16 0.0 HOH
 3.165
 NH2
 O
ARG B:52 B:552 75.0 0.333 E -134.9 137.5 75.0 0.333 0.0 HOH
 3.328
 NH1
 O
2hgx 1 O15382 99.45 0.0 X-RAY
 2006-10-24 ARG A:52 A:52 38.0 0.169 E -125.6 138.5 38.0 0.169 0.0 HOH
 3.874
 NH1
 O
ARG B:52 B:552 75.0 0.333 E -130.2 135.7 75.0 0.333 0.0 HOH
 3.540
 NH1
 O
2hgw 1 O15382 99.45 0.0 X-RAY
 2006-10-24 ARG A:52 A:52 71.0 0.316 E -142.7 127.4 71.0 0.316 0.0 ACY
HOH
 9.265
4.740
 CD
NH2
 CH3
O
ARG B:52 B:552 107.0 0.476 E -142.4 140.1 107.0 0.476 0.0 HOH
 5.562
 N
 O
6prx 1 O15382 99.45 0.0 X-RAY
 2020-01-22 ARG A:70 A:52 83.0 0.369 E -126.6 124.1 83.0 0.369 0.0
ARG B:70 B:52 126.0 0.56 E -127.2 124.0 126.0 0.56 0.0
2hdk 1 O15382 99.18 0.0 X-RAY
 2006-10-24 ARG A:52 A:52 70.0 0.311 E -129.8 144.1 70.0 0.311 0.0 HOH
 6.077
 CD
 O
ARG B:52 B:552 38.0 0.169 E -141.3 142.3 38.0 0.169 0.0 HOH
 3.923
 NH2
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o15382-f1 1 O15382 100.0 0.0 ARG A:79 A:79 66.0 0.293 E -137.6 132.9