Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 50017259 . G A CCDS12770.1:NM_001136019.2:c.194cGg>cAg_NP_001129491.1:p.65R>Q Homo sapiens Fc fragment of IgG receptor and transporter (FCGRT), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6fgb 1 P55899 100.0 0.0 X-RAY
 2018-08-29 ARG A:42 A:42 142.0 0.631 T -71.8 -34.9 142.0 0.631 0.0 HOH
 4.542
 CB
 O
5whk 3 P55899 100.0 0.0 X-RAY
 2017-09-06 ARG C:65 A:42 162.0 0.72 T -95.5 -36.4 162.0 0.72 0.0 NHE
HOH
 4.521
6.999
 O
N
 C4'
O
5bxf 1 P55899 100.0 0.0 X-RAY
 2015-11-11 ARG A:65 A:42 165.0 0.733 T -54.7 -45.0 165.0 0.733 0.0
ARG C:65 C:42 160.0 0.711 T -67.6 -53.0 NA NA NA
4k71 2 P55899 100.0 0.0 X-RAY
 2013-10-23 ARG B:42 B:42 158.0 0.702 T -73.3 -40.4 64.0 0.284 0.418 A:P02768:0.418
 SO4
HOH
 3.039
4.298
 NH1
CZ
 O3
O
ARG E:42 E:42 155.0 0.689 T -72.8 -41.7 NA NA NA
6c97 1 P55899 100.0 0.0 X-RAY
 2018-05-30 ARG A:42 A:42 115.0 0.511 T -83.5 -38.2 115.0 0.511 0.0 GOL
HOH
 6.615
2.539
 NH2
NE
 O3
O
ARG C:42 C:42 166.0 0.738 T -76.5 -39.8 NA NA NA
6c98 1 P55899 100.0 0.0 X-RAY
 2018-05-30 ARG A:42 A:42 67.0 NA T -81.9 -32.5 67.0 NA NA CYS
HOH
 9.715
3.204
 CB
CB
 N
O
ARG C:42 C:42 64.0 NA T -80.0 -33.5 NA NA NA
6c99 1 P55899 100.0 0.0 X-RAY
 2018-05-30 ARG A:42 A:42 65.0 NA T -93.3 -36.4 65.0 NA NA GOL
HOH
 8.278
3.388
 N
CB
 O1
O
ARG C:42 C:42 67.0 NA T -78.7 -38.2 NA NA NA
6qio 2 P55899 100.0 0.0 X-RAY
 2020-02-05 ARG B:42 B:42 156.0 0.693 T -86.9 -40.9 67.0 0.298 0.395 A:P02768:0.396
 CYS
HOH
 8.428
2.257
 HD3
HH11
 SG
O
6qip 2 P55899 100.0 0.0 X-RAY
 2020-02-05 ARG B:42 B:42 158.0 0.702 T -88.6 -40.8 69.0 0.307 0.395 A:P02768:0.396
 CYS
HOH
 8.990
5.731
 CD
C
 SG
O
6nha 1 P55899 98.2 0.0 X-RAY
 2019-12-25 ARG A:42 A:42 140.0 0.622 T -90.5 -42.5 140.0 0.622 0.0
4n0f 1 P55899 100.0 0.0 X-RAY
 2014-02-05 ARG A:39 A:42 173.0 0.769 T -70.0 -38.3 66.0 0.293 0.476 C:P02768:0.476
ARG D:39 E:42 171.0 0.76 T -69.6 -39.1 NA NA NA
ARG G:39 H:42 169.0 0.751 T -70.6 -37.8 NA NA NA
ARG J:39 K:42 173.0 0.769 T -70.7 -38.4 NA NA NA
1exu 1 P55899 100.0 0.0 X-RAY
 2000-08-10 ARG A:42 A:42 163.0 0.724 T -63.0 -50.7 163.0 0.724 0.0 BME
HOH
 8.437
5.171
 NH1
C
 S2
O
3m17 1 P55899 100.0 0.0 X-RAY
 2010-06-16 ARG A:42 A:42 147.0 0.653 T -117.1 -35.8 147.0 0.653 0.0 HOH
 2.976
 CD
 O
ARG C:42 C:42 144.0 0.64 T -78.4 -46.0 NA NA NA
ARG E:42 E:42 94.0 NA T -83.0 -48.5 NA NA NA
ARG G:42 G:42 85.0 NA T -107.6 -35.7 NA NA NA
3m1b 1 P55899 100.0 0.0 X-RAY
 2010-06-16 ARG A:42 A:42 152.0 0.676 S -89.6 -53.0 152.0 0.676 0.0
ARG C:42 C:42 164.0 0.729 T -78.1 -45.0 NA NA NA
ARG E:42 E:42 160.0 0.711 T -79.9 -59.6 NA NA NA
ARG G:42 G:42 170.0 0.756 T -58.8 -35.3 NA NA NA
5bjt 1 P55899 100.0 0.0 X-RAY
 2017-03-22 ARG A:42 A:42 58.0 NA S -146.4 -21.2 58.0 NA NA
ARG C:42 C:42 57.0 NA T -79.7 -70.1 NA NA NA
ARG E:42 E:42 69.0 NA T -137.5 -10.6 NA NA NA
ARG G:42 G:42 89.0 NA T -95.3 -83.3 NA NA NA
6wol 2 P55899 100.0 0.0 X-RAY
 2021-09-15 ARG B:42 A:42 162.0 0.72 T -80.4 -44.8 162.0 0.72 0.0 HOH
 5.972
 C
 O
7b5f 5 P55899 100.0 0.0 EM
 2022-01-12 ARG E:42 G:42 115.0 NA -94.7 360.0 115.0 NA NA
4n0u 1 P55899 100.0 0.0 X-RAY
 2014-02-05 ARG A:39 A:42 167.0 0.742 T -70.1 -39.6 66.0 0.293 0.449 C:P02768:0.449
6wna 1 P55899 100.0 0.0 X-RAY
 2021-09-15 ARG A:39 A:42 168.0 0.747 T -77.1 -41.7 168.0 0.747 0.0 HOH
 5.736
 C
 O
6ilm 5 P55899 100.0 0.0 EM
 2019-05-15 ARG E:38 E:42 128.0 0.569 T -109.2 -53.9 128.0 0.569 0.0
6la6 5 P55899 100.0 0.0 EM
 2020-10-07 ARG E:38 E:42 115.0 0.511 T -111.8 -55.2 115.0 0.511 0.0
6la7 5 P55899 100.0 0.0 EM
 2020-10-07 ARG E:38 E:42 133.0 0.591 T -104.7 -50.5 133.0 0.591 0.0
7c9v 5 P55899 100.0 0.0 EM
 2020-07-29 ARG E:38 E:42 137.0 0.609 S -114.6 -23.3 137.0 0.609 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p55899-f1 1 P55899 100.0 0.0 ARG A:65 A:65 131.0 0.582 T -82.6 -38.4