Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 50017268 . C A CCDS12770.1:NM_001136019.2:c.203gCg>gAg_NP_001129491.1:p.68A>E Homo sapiens Fc fragment of IgG receptor and transporter (FCGRT), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6fgb 1 P55899 100.0 0.0 X-RAY
 2018-08-29 ALA A:45 A:45 8.0 0.07 -85.8 135.4 8.0 0.07 0.0 HOH
 5.571
 C
 O
5whk 3 P55899 100.0 0.0 X-RAY
 2017-09-06 ALA C:68 A:45 6.0 0.052 -69.5 133.5 6.0 0.052 0.0 NHE
NHE
HOH
 8.858
8.516
4.618
 N
CB
O
 C5'
C1
O
5bxf 1 P55899 100.0 0.0 X-RAY
 2015-11-11 ALA A:68 A:45 4.0 0.035 -92.4 133.9 4.0 0.035 0.0
ALA C:68 C:45 4.0 0.035 -73.0 136.0 NA NA NA
4k71 2 P55899 100.0 0.0 X-RAY
 2013-10-23 ALA B:45 B:45 1.0 0.009 -80.5 127.6 1.0 0.009 0.0 SO4
HOH
 8.187
7.828
 C
O
 O4
O
ALA E:45 E:45 3.0 0.026 -85.7 129.4 NA NA NA
6c97 1 P55899 100.0 0.0 X-RAY
 2018-05-30 ALA A:45 A:45 2.0 0.017 -77.2 134.6 2.0 0.017 0.0 HOH
 4.512
 N
 O
ALA C:45 C:45 2.0 0.017 -76.3 137.1 NA NA NA
6c98 1 P55899 100.0 0.0 X-RAY
 2018-05-30 ALA A:45 A:45 2.0 0.017 -79.8 135.0 2.0 0.017 0.0 CYS
HOH
 7.732
4.796
 C
N
 SG
O
ALA C:45 C:45 7.0 0.061 -79.3 136.4 NA NA NA
6c99 1 P55899 100.0 0.0 X-RAY
 2018-05-30 ALA A:45 A:45 2.0 0.017 -76.3 132.3 2.0 0.017 0.0 HOH
 4.575
 N
 O
ALA C:45 C:45 2.0 0.017 -74.8 135.9 NA NA NA
6qio 2 P55899 100.0 0.0 X-RAY
 2020-02-05 ALA B:45 B:45 4.0 0.035 -78.1 138.9 4.0 0.035 0.0 CYS
HOH
 7.870
2.702
 C
O
 SG
O
6qip 2 P55899 100.0 0.0 X-RAY
 2020-02-05 ALA B:45 B:45 5.0 0.043 -79.4 136.9 5.0 0.043 0.0 CYS
HOH
 7.910
9.519
 C
N
 SG
O
6nha 1 P55899 98.2 0.0 X-RAY
 2019-12-25 ALA A:45 A:45 7.0 0.061 -76.8 104.2 7.0 0.061 0.0 NHE
HOH
 8.003
7.613
 CB
O
 C2'
O
4n0f 1 P55899 100.0 0.0 X-RAY
 2014-02-05 ALA A:42 A:45 2.0 0.017 -81.0 127.6 2.0 0.017 0.0
ALA D:42 E:45 3.0 0.026 -83.0 128.3 NA NA NA
ALA G:42 H:45 3.0 0.026 -82.3 127.4 NA NA NA
ALA J:42 K:45 2.0 0.017 -81.4 127.6 NA NA NA
1exu 1 P55899 100.0 0.0 X-RAY
 2000-08-10 ALA A:45 A:45 11.0 0.096 -91.0 111.6 11.0 0.096 0.0 BME
HOH
 8.598
9.343
 C
N
 S2
O
3m17 1 P55899 100.0 0.0 X-RAY
 2010-06-16 ALA A:45 A:45 5.0 0.043 -81.7 130.4 5.0 0.043 0.0 HOH
 7.704
 O
 O
ALA C:45 C:45 6.0 0.052 -72.4 148.9 NA NA NA
ALA E:45 E:45 1.0 0.009 -88.7 135.5 NA NA NA
ALA G:45 G:45 4.0 0.035 -83.0 128.9 NA NA NA
3m1b 1 P55899 100.0 0.0 X-RAY
 2010-06-16 ALA A:45 A:45 6.0 0.052 -71.7 97.7 6.0 0.052 0.0
ALA C:45 C:45 9.0 0.078 -110.5 145.7 NA NA NA
ALA E:45 E:45 7.0 0.061 -79.6 96.8 NA NA NA
ALA G:45 G:45 6.0 0.052 -104.8 127.3 NA NA NA
5bjt 1 P55899 100.0 0.0 X-RAY
 2017-03-22 ALA A:45 A:45 5.0 0.043 -91.5 129.7 5.0 0.043 0.0
ALA C:45 C:45 2.0 0.017 E -98.9 111.8 NA NA NA
ALA E:45 E:45 4.0 0.035 E -121.9 124.8 NA NA NA
ALA G:45 G:45 12.0 0.104 -60.2 114.5 NA NA NA
6wol 2 P55899 100.0 0.0 X-RAY
 2021-09-15 ALA B:45 A:45 7.0 0.061 -78.6 130.0 7.0 0.061 0.0 HOH
 8.578
 C
 O
7b5f 5 P55899 100.0 0.0 EM
 2022-01-12 ALA E:45 NA:NA DO NA DO DO DO NA NA NA
4n0u 1 P55899 100.0 0.0 X-RAY
 2014-02-05 ALA A:42 A:45 2.0 0.017 -79.4 123.8 2.0 0.017 0.0
6wna 1 P55899 100.0 0.0 X-RAY
 2021-09-15 ALA A:42 A:45 6.0 0.052 -67.7 136.3 6.0 0.052 0.0 HOH
 7.457
 O
 O
6ilm 5 P55899 100.0 0.0 EM
 2019-05-15 ALA E:41 E:45 7.0 0.061 B -98.7 146.7 7.0 0.061 0.0
6la6 5 P55899 100.0 0.0 EM
 2020-10-07 ALA E:41 E:45 14.0 0.122 -80.3 156.8 14.0 0.122 0.0
6la7 5 P55899 100.0 0.0 EM
 2020-10-07 ALA E:41 E:45 7.0 0.061 -79.9 163.1 7.0 0.061 0.0
7c9v 5 P55899 100.0 0.0 EM
 2020-07-29 ALA E:41 E:45 6.0 0.052 -97.7 141.1 6.0 0.052 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p55899-f1 1 P55899 100.0 0.0 ALA A:68 A:68 8.0 0.07 E -89.3 131.3