Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 50017381 . G A CCDS12770.1:NM_001136019.2:c.316Ggg>Agg_NP_001129491.1:p.106G>R Homo sapiens Fc fragment of IgG receptor and transporter (FCGRT), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6fgb 1 P55899 100.0 0.0 X-RAY
 2018-08-29 GLY A:83 A:83 67.0 0.893 -63.1 126.5 67.0 0.893 0.0
5whk 3 P55899 100.0 0.0 X-RAY
 2017-09-06 GLY C:106 A:83 32.0 0.427 68.9 -163.9 26.0 0.347 0.08 B:Q6NS95:0.08
 EDO
HOH
 3.500
3.527
 O
CA
 O1
O
5bxf 1 P55899 100.0 0.0 X-RAY
 2015-11-11 GLY A:106 A:83 88.0 1.0 -121.1 39.4 88.0 1.0 0.0
GLY C:106 C:83 67.0 0.893 -87.2 61.7 NA NA NA
4k71 2 P55899 100.0 0.0 X-RAY
 2013-10-23 GLY B:83 B:83 26.0 0.347 74.3 177.3 26.0 0.347 0.0
GLY E:83 E:83 29.0 0.387 79.0 -173.1 NA NA NA
6c97 1 P55899 100.0 0.0 X-RAY
 2018-05-30 GLY A:83 A:83 32.0 0.427 68.2 -171.8 32.0 0.427 0.0 HOH
 3.432
 O
 O
GLY C:83 C:83 32.0 0.427 72.4 -174.1 NA NA NA
6c98 1 P55899 100.0 0.0 X-RAY
 2018-05-30 GLY A:83 A:83 112.0 1.0 -75.2 360.0 112.0 1.0 0.0 HOH
 6.522
 N
 O
GLY C:83 C:83 115.0 1.0 -83.9 360.0 NA NA NA
6c99 1 P55899 100.0 0.0 X-RAY
 2018-05-30 GLY A:83 A:83 33.0 0.44 63.0 -166.0 33.0 0.44 0.0 HOH
 3.004
 O
 O
GLY C:83 C:83 38.0 0.507 71.9 169.1 NA NA NA
6qio 2 P55899 100.0 0.0 X-RAY
 2020-02-05 GLY B:83 B:83 54.0 0.72 55.0 -100.2 54.0 0.72 0.0 HOH
 4.669
 O
 O
6qip 2 P55899 100.0 0.0 X-RAY
 2020-02-05 GLY B:83 B:83 58.0 0.773 58.0 -96.1 58.0 0.773 0.0
6nha 1 P55899 98.2 0.0 X-RAY
 2019-12-25 GLY A:83 A:83 74.0 0.987 105.9 -20.8 74.0 0.987 0.0 HOH
 5.584
 C
 O
4n0f 1 P55899 100.0 0.0 X-RAY
 2014-02-05 GLY A:80 A:83 62.0 0.827 76.2 -70.0 62.0 0.827 0.0
GLY D:80 E:83 61.0 0.813 77.3 -71.1 NA NA NA
GLY G:80 H:83 61.0 0.813 76.1 -68.3 NA NA NA
GLY J:80 K:83 59.0 0.787 76.9 -69.2 NA NA NA
1exu 1 P55899 100.0 0.0 X-RAY
 2000-08-10 GLY A:83 A:83 33.0 0.44 54.2 -171.9 33.0 0.44 0.0
3m17 1 P55899 100.0 0.0 X-RAY
 2010-06-16 GLY A:83 A:83 84.0 1.0 -121.1 10.0 84.0 1.0 0.0 HOH
 6.615
 C
 O
GLY C:83 C:83 84.0 1.0 -123.2 7.0 NA NA NA
GLY E:83 E:83 86.0 1.0 -114.4 3.0 NA NA NA
GLY G:83 G:83 80.0 1.0 -121.5 -16.1 NA NA NA
3m1b 1 P55899 100.0 0.0 X-RAY
 2010-06-16 GLY A:83 A:83 86.0 1.0 -91.8 23.1 86.0 1.0 0.0
GLY C:83 C:83 75.0 1.0 -89.7 -73.9 NA NA NA
GLY E:83 E:83 87.0 1.0 -73.8 -15.0 NA NA NA
GLY G:83 G:83 87.0 1.0 -74.3 -11.2 NA NA NA
5bjt 1 P55899 100.0 0.0 X-RAY
 2017-03-22 GLY A:83 A:83 88.0 1.0 3.0 -80.8 88.0 1.0 0.0
GLY C:83 C:83 89.0 1.0 -56.6 85.0 NA NA NA
GLY E:83 E:83 79.0 1.0 S -64.4 66.1 NA NA NA
GLY G:83 G:83 85.0 1.0 -58.4 -34.9 NA NA NA
6wol 2 P55899 100.0 0.0 X-RAY
 2021-09-15 GLY B:83 A:83 56.0 0.747 38.5 49.5 56.0 0.747 0.0 HOH
 9.082
 CA
 O
7b5f 5 P55899 100.0 0.0 EM
 2022-01-12 GLY E:83 G:83 82.0 1.0 65.0 -9.7 5.0 0.067 0.933 D:Q8V635:1.0
4n0u 1 P55899 100.0 0.0 X-RAY
 2014-02-05 GLY A:80 A:83 57.0 0.76 84.7 -74.0 57.0 0.76 0.0
6wna 1 P55899 100.0 0.0 X-RAY
 2021-09-15 GLY A:80 A:83 57.0 0.76 46.3 -80.2 57.0 0.76 0.0 HOH
 2.766
 O
 O
6ilm 5 P55899 100.0 0.0 EM
 2019-05-15 GLY E:79 E:83 88.0 1.0 -96.3 27.3 21.0 0.28 0.72 B:None:0.893
6la6 5 P55899 100.0 0.0 EM
 2020-10-07 GLY E:79 E:83 87.0 1.0 -88.5 -0.5 14.0 0.187 0.813 B:None:0.973
6la7 5 P55899 100.0 0.0 EM
 2020-10-07 GLY E:79 E:83 87.0 1.0 -86.7 -10.3 12.0 0.16 0.84 B:None:1.0
7c9v 5 P55899 100.0 0.0 EM
 2020-07-29 GLY E:79 E:83 89.0 1.0 -107.6 39.6 20.0 0.267 0.733 B:None:0.92

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p55899-f1 1 P55899 100.0 0.0 GLY A:106 A:106 38.0 0.507 60.4 177.3