Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 50017538 . G A CCDS12770.1:NM_001136019.2:c.396aaG>aaA_NP_001129491.1:p.132K>K Homo sapiens Fc fragment of IgG receptor and transporter (FCGRT), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6fgb 1 P55899 100.0 0.0 X-RAY
 2018-08-29 LYS A:109 A:109 85.0 0.425 E -114.5 153.1 5.0 0.025 0.4 B:P61769:0.07
D:None:0.335
 NA
NA
HOH
 8.011
3.471
9.447
 O
NZ
O
 NA
NA
O
5whk 3 P55899 100.0 0.0 X-RAY
 2017-09-06 LYS C:132 A:109 95.0 0.475 E -126.6 152.3 90.0 0.45 0.025 D:P61769:0.025
 NHE
HOH
 9.822
3.499
 O
CG
 C4'
O
5bxf 1 P55899 100.0 0.0 X-RAY
 2015-11-11 LYS A:132 A:109 97.0 0.485 E -114.6 154.9 87.0 0.435 0.05 B:P61769:0.05
LYS C:132 C:109 80.0 0.4 -157.6 143.9 NA NA NA
4k71 2 P55899 100.0 0.0 X-RAY
 2013-10-23 LYS B:109 B:109 96.0 0.48 E -128.1 148.0 82.0 0.41 0.07 C:P61769:0.07
 HOH
 3.656
 CG
 O
LYS E:109 E:109 98.0 0.49 E -128.9 147.8 NA NA NA
6c97 1 P55899 100.0 0.0 X-RAY
 2018-05-30 LYS A:109 A:109 95.0 0.475 E -129.2 153.3 89.0 0.445 0.03 B:P61769:0.03
 GOL
HOH
 3.507
3.620
 CG
CE
 O1
O
LYS C:109 C:109 96.0 0.48 E -127.9 150.9 NA NA NA
6c98 1 P55899 100.0 0.0 X-RAY
 2018-05-30 LYS A:109 A:109 98.0 0.49 E -127.2 152.4 92.0 0.46 0.03 B:P61769:0.03
 HOH
 3.650
 CG
 O
LYS C:109 C:109 99.0 0.495 E -126.2 154.1 NA NA NA
6c99 1 P55899 100.0 0.0 X-RAY
 2018-05-30 LYS A:109 A:109 99.0 0.495 E -128.1 154.0 94.0 0.47 0.025 B:P61769:0.025
 GOL
GOL
HOH
 3.713
4.659
3.584
 CG
CG
CE
 O3
O1
O
LYS C:109 C:109 99.0 0.495 E -128.8 152.0 NA NA NA
6qio 2 P55899 100.0 0.0 X-RAY
 2020-02-05 LYS B:109 B:109 95.0 0.475 E -128.1 151.5 70.0 0.35 0.125 C:P61769:0.125
 HOH
 2.237
 HZ3
 O
6qip 2 P55899 100.0 0.0 X-RAY
 2020-02-05 LYS B:109 B:109 98.0 0.49 E -125.5 152.2 64.0 0.32 0.17 C:P61769:0.17
6nha 1 P55899 98.2 0.0 X-RAY
 2019-12-25 LYS A:109 A:109 98.0 0.49 E -124.1 145.7 84.0 0.42 0.07 B:P61769:0.07
 HOH
 5.679
 CD
 O
4n0f 1 P55899 100.0 0.0 X-RAY
 2014-02-05 LYS A:106 A:109 111.0 0.555 E -122.2 158.9 85.0 0.425 0.13 B:P61769:0.13
LYS D:106 E:109 113.0 0.565 E -124.6 157.3 NA NA NA
LYS G:106 H:109 116.0 0.58 E -123.0 157.2 NA NA NA
LYS J:106 K:109 115.0 0.575 E -123.6 156.6 NA NA NA
1exu 1 P55899 100.0 0.0 X-RAY
 2000-08-10 LYS A:109 A:109 89.0 0.445 E -123.4 150.6 58.0 0.29 0.155 B:P61769:0.155
 HOH
 7.526
 O
 O
3m17 1 P55899 100.0 0.0 X-RAY
 2010-06-16 LYS A:109 A:109 89.0 0.445 E -127.5 147.2 89.0 0.445 0.0
LYS C:109 C:109 102.0 0.51 E -133.9 148.4 NA NA NA
LYS E:109 E:109 91.0 0.455 E -118.0 145.7 NA NA NA
LYS G:109 G:109 89.0 0.445 E -120.0 157.7 NA NA NA
3m1b 1 P55899 100.0 0.0 X-RAY
 2010-06-16 LYS A:109 A:109 67.0 0.335 E -129.0 146.3 67.0 0.335 0.0
LYS C:109 C:109 89.0 0.445 -155.7 146.0 NA NA NA
LYS E:109 E:109 78.0 0.39 E -117.3 119.4 NA NA NA
LYS G:109 G:109 72.0 0.36 -162.1 154.6 NA NA NA
5bjt 1 P55899 100.0 0.0 X-RAY
 2017-03-22 LYS A:109 A:109 96.0 0.48 E -127.8 155.5 88.0 0.44 0.04 B:P61769:0.04
LYS C:109 C:109 88.0 0.44 E -138.4 126.1 NA NA NA
LYS E:109 E:109 28.0 NA E -142.7 148.6 NA NA NA
LYS G:109 G:109 29.0 NA E -147.3 104.4 NA NA NA
6wol 2 P55899 100.0 0.0 X-RAY
 2021-09-15 LYS B:109 A:109 90.0 0.45 E -122.3 153.2 69.0 0.345 0.105 C:P61769:0.105
 HOH
 7.812
 O
 O
7b5f 5 P55899 100.0 0.0 EM
 2022-01-12 LYS E:109 G:109 95.0 0.475 E -70.7 147.1 90.0 0.45 0.025 F:P61769:0.025
4n0u 1 P55899 100.0 0.0 X-RAY
 2014-02-05 LYS A:106 A:109 109.0 0.545 E -121.0 159.2 86.0 0.43 0.115 B:P61769:0.115
6wna 1 P55899 100.0 0.0 X-RAY
 2021-09-15 LYS A:106 A:109 96.0 0.48 E -115.4 155.6 89.0 0.445 0.035 B:P61769:0.035
 HOH
 3.086
 NZ
 O
6ilm 5 P55899 100.0 0.0 EM
 2019-05-15 LYS E:105 E:109 75.0 0.375 E -133.1 144.1 58.0 0.29 0.085 F:P61769:0.085
6la6 5 P55899 100.0 0.0 EM
 2020-10-07 LYS E:105 E:109 81.0 0.405 E -132.5 150.9 70.0 0.35 0.055 F:P61769:0.055
6la7 5 P55899 100.0 0.0 EM
 2020-10-07 LYS E:105 E:109 93.0 0.465 E -133.3 156.4 79.0 0.395 0.07 F:P61769:0.07
7c9v 5 P55899 100.0 0.0 EM
 2020-07-29 LYS E:105 E:109 88.0 0.44 E -122.9 149.2 75.0 0.375 0.065 F:P61769:0.065

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p55899-f1 1 P55899 100.0 0.0 LYS A:132 A:132 85.0 0.425 E -120.4 149.1