Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 52693377 . C A CCDS12849.1:NM_014225.5:c.28Ctg>Atg_NP_055040.2:p.10L>M Homo sapiens protein phosphatase 2 scaffold subunit Aalpha (PPP2R1A), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2ie3 1 Q96DH3 100.0 0.0 X-RAY
 2006-11-07 LEU A:10 A:10 137.0 0.806 -122.5 155.2 137.0 0.806 0.0
2ie4 1 Q96DH3 100.0 0.0 X-RAY
 2006-11-07 LEU A:10 A:10 131.0 0.771 -124.2 135.9 131.0 0.771 0.0 HOH
 3.405
 CB
 O
2npp 1 Q96DH3 100.0 0.0 X-RAY
 2006-12-12 LEU A:10 A:10 120.0 0.706 -123.1 19.3 NA NA NA
LEU D:10 D:10 119.0 0.7 -118.7 21.5 119.0 0.7 0.0
3k7v 1 P30153 100.0 0.0 X-RAY
 2009-11-03 LEU A:10 A:10 138.0 0.812 -139.3 149.9 138.0 0.812 0.0 HOH
 3.274
 O
 O
3k7w 1 P30153 100.0 0.0 X-RAY
 2009-11-03 LEU A:10 A:10 140.0 0.824 -136.9 146.6 140.0 0.824 0.0
6nts 1 P30153 100.0 0.0 EM
 2020-05-06 LEU A:10 A:10 59.0 0.347 S -68.3 135.0 59.0 0.347 0.0
7cun 10 P30153 100.0 0.0 EM
 2020-11-25 LEU J:10 P:10 121.0 0.712 T -85.4 -10.4 121.0 0.712 0.0
7k36 1 P30153 100.0 0.0 EM
 2021-03-10 LEU A:10 NA:NA DO NA DO DO DO NA NA NA
7pks 31 P30153 100.0 0.0 EM
 2021-12-08 LEU EA:10 p:10 145.0 0.853 S -89.0 -1.9 115.0 0.676 0.177 BA:Q75QN2:0.176
2iae 1 Q76MZ3 99.83 0.0 X-RAY
 2006-12-26 LEU A:10 A:10 136.0 0.8 -75.2 -174.2 136.0 0.8 0.0
LEU D:10 D:10 90.0 0.529 -102.3 28.7 NA NA NA
2pf4 1 Q76MZ3 99.83 0.0 X-RAY
 2007-08-07 LEU A:10 NA:NA DO NA DO DO DO NA NA NA
LEU B:10 NA:NA DO NA DO DO DO NA NA NA
LEU C:10 NA:NA DO NA DO DO DO NA NA NA
LEU D:10 NA:NA DO NA DO DO DO NA NA NA
1b3u 1 P30153 100.0 0.0 X-RAY
 1999-04-12 LEU A:9 A:9 59.0 0.347 S -153.6 46.1 59.0 0.347 0.0 HOH
 4.425
 CG
 O
LEU B:9 B:9 57.0 0.335 T -144.7 35.4 NA NA NA
3fga 1 Q76MZ3 99.83 0.0 X-RAY
 2009-09-22 LEU A:9 A:10 65.0 0.382 T -99.4 15.8 65.0 0.382 0.0 HOH
 7.444
 CD1
 O
6ef4 1 Q76MZ3 99.66 0.0 X-RAY
 2019-06-26 LEU A:11 NA:NA DO NA DO DO DO NA NA NA
6iur 1 P30153 100.0 0.0 X-RAY
 2019-12-04 LEU A:8 A:10 139.0 0.818 T -89.2 21.4 38.0 0.224 0.594 D:Q13033:0.594
 HOH
 9.098
 CD1
 O
LEU B:8 B:10 115.0 0.676 G -112.6 10.4 14.0 0.082 0.594 C:Q13033:0.594
 TME
 4.729
 CD2
 C1
LEU E:8 E:10 125.0 0.735 T -141.4 -9.5 NA NA NA
LEU F:8 F:10 118.0 0.694 T -100.0 -0.1 NA NA NA
2nyl 1 Q96DH3 100.0 0.0 X-RAY
 2006-12-12 LEU A:3 A:10 108.0 0.635 S -97.8 9.8 108.0 0.635 0.0
LEU D:3 D:10 114.0 0.671 S -96.4 20.7 NA NA NA
2nym 1 Q96DH3 100.0 0.0 X-RAY
 2006-12-12 LEU A:3 A:10 116.0 0.682 S -117.5 18.5 116.0 0.682 0.0
LEU D:3 D:10 118.0 0.694 -118.8 26.3 NA NA NA
4i5l 1 P30153 99.66 0.0 X-RAY
 2013-05-08 LEU A:5 A:10 105.0 0.618 S -88.9 -20.0 34.0 0.2 0.418 B:Q9Y5P8+Q99741:0.418
 HOH
 7.660
 O
 O
LEU D:5 D:10 133.0 0.782 H -70.4 -42.3 NA NA NA
4i5n 1 P30153 99.66 0.0 X-RAY
 2013-05-08 LEU A:5 A:10 91.0 0.535 H -73.0 -22.6 25.0 0.147 0.388 B:Q9Y5P8+Q99741:0.388
LEU D:5 D:10 131.0 0.771 H -66.8 -39.4 NA NA NA
3dw8 1 P30153 100.0 0.0 X-RAY
 2008-10-07 LEU A:3 A:10 116.0 0.682 S -80.8 -31.6 40.0 0.235 0.447 B:P63151:0.447
LEU D:3 D:10 134.0 0.788 H -59.9 -44.4 NA NA NA
5w0w 1 P30153 100.0 0.0 X-RAY
 2018-01-17 LEU A:6 A:10 141.0 0.829 -124.3 -146.4 141.0 0.829 0.0
LEU D:6 D:10 151.0 0.888 73.2 -14.0 NA NA NA
LEU G:6 G:10 135.0 0.794 -86.8 4.6 NA NA NA
LEU J:6 J:10 148.0 0.871 -94.9 15.7 NA NA NA
2pkg 1 P30153 100.0 0.0 X-RAY
 2007-05-15 LEU A:1 A:10 83.0 0.488 360.0 -113.6 83.0 0.488 0.0
LEU B:1 B:10 89.0 0.524 360.0 -99.6 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p30153-f1 1 P30153 100.0 0.0 LEU A:10 A:10 60.0 0.353 G -92.1 -11.7
af-p30154-f1 1 P30154 86.4 0.0 LEU A:22 A:22 93.0 0.547 G -87.1 -21.1